RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 H7C2G1 150 aa16.55■□□□□ 0.24
NPLOC4-217ENST00000574897 Q9H8V8 135 aa16.54■□□□□ 0.24
NPLOC4-217ENST00000574897 NDUFA1O15239 70 aa16.53■□□□□ 0.24
NPLOC4-217ENST00000574897 IGHV4-28A0A0C4DH34 117 aa16.53■□□□□ 0.24
NPLOC4-217ENST00000574897 SMAGPQ0VAQ4 97 aa16.53■□□□□ 0.24
NPLOC4-217ENST00000574897 SPANXDQ9BXN6 97 aa16.53■□□□□ 0.24
NPLOC4-217ENST00000574897 SPANXCQ9NY87 97 aa16.53■□□□□ 0.24
NPLOC4-217ENST00000574897 PSMB2P49721 201 aa16.52■□□□□ 0.24
NPLOC4-217ENST00000574897 MIAQ16674 131 aa16.52■□□□□ 0.24
NPLOC4-217ENST00000574897 A0A0U1RRA0 63 aa16.52■□□□□ 0.23
NPLOC4-217ENST00000574897 H7C423 109 aa16.52■□□□□ 0.23
NPLOC4-217ENST00000574897 IGHV3-33P01772 117 aa16.52■□□□□ 0.23
NPLOC4-217ENST00000574897 WFDC9Q8NEX5 89 aa16.52■□□□□ 0.23
NPLOC4-217ENST00000574897 PRO0461Q9UI25 63 aa16.52■□□□□ 0.23
NPLOC4-217ENST00000574897 APOC4P55056 127 aa16.51■□□□□ 0.23
NPLOC4-217ENST00000574897 ATP6V0E2Q8NHE4 81 aa16.51■□□□□ 0.23
NPLOC4-217ENST00000574897 CELA1Q9UNI1 258 aa16.5■□□□□ 0.23
NPLOC4-217ENST00000574897 A0A0B4J2C4 111 aa16.5■□□□□ 0.23
NPLOC4-217ENST00000574897 K7ERU9 68 aa16.5■□□□□ 0.23
NPLOC4-217ENST00000574897 PRO0255Q9UI72 69 aa16.49■□□□□ 0.23
NPLOC4-217ENST00000574897 TEX48A0A1B0GUV7 120 aa16.49■□□□□ 0.23
NPLOC4-217ENST00000574897 F8W1H4 67 aa16.49■□□□□ 0.23
NPLOC4-217ENST00000574897 SH2D6Q7Z4S9 175 aa16.49■□□□□ 0.23
NPLOC4-217ENST00000574897 STAB1Q9NY15 2570 aa16.49■□□□□ 0.23
NPLOC4-217ENST00000574897 TCL1BO95988 128 aa16.48■□□□□ 0.23
NPLOC4-217ENST00000574897 IGHV4-30-4P0DP06 118 aa16.48■□□□□ 0.23
NPLOC4-217ENST00000574897 LYRM9A8MSI8 78 aa16.48■□□□□ 0.23
NPLOC4-217ENST00000574897 FBN1P35555 2871 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-217ENST00000574897 PKD1L1Q8TDX9 2849 aa16.47■□□□□ 0.23
NPLOC4-217ENST00000574897 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.46■□□□□ 0.23
NPLOC4-217ENST00000574897 Q8NAQ8 132 aa16.46■□□□□ 0.23
NPLOC4-217ENST00000574897 ERG28Q9UKR5 140 aa16.46■□□□□ 0.23
NPLOC4-217ENST00000574897 PAX4O43316 350 aa16.45■□□□□ 0.22
NPLOC4-217ENST00000574897 ETDBQ3ZM63 59 aa16.45■□□□□ 0.22
NPLOC4-217ENST00000574897 OXLD1Q5BKU9 147 aa16.45■□□□□ 0.22
NPLOC4-217ENST00000574897 TIMM17BO60830 172 aa16.44■□□□□ 0.22
NPLOC4-217ENST00000574897 SMCPP49901 116 aaPredicted RBP16.44■□□□□ 0.22
NPLOC4-217ENST00000574897 PRIMA1Q86XR5 153 aa16.44■□□□□ 0.22
NPLOC4-217ENST00000574897 VPS25Q9BRG1 176 aa16.44■□□□□ 0.22
NPLOC4-217ENST00000574897 SCGB1C2P0DMR2 95 aa16.44■□□□□ 0.22
NPLOC4-217ENST00000574897 TMEM262E9PQX1 116 aa16.43■□□□□ 0.22
NPLOC4-217ENST00000574897 G3V4G9 280 aa16.43■□□□□ 0.22
NPLOC4-217ENST00000574897 DAD1P61803 113 aa16.43■□□□□ 0.22
NPLOC4-217ENST00000574897 Q1RN00 199 aa16.43■□□□□ 0.22
NPLOC4-217ENST00000574897 WIPF1O43516 503 aa16.42■□□□□ 0.22
NPLOC4-217ENST00000574897 KRTAP24-1Q3LI83 254 aa16.42■□□□□ 0.22
NPLOC4-217ENST00000574897 CLPSL2Q6UWE3 100 aa16.42■□□□□ 0.22
NPLOC4-217ENST00000574897 CBY1Q9Y3M2 126 aa16.42■□□□□ 0.22
NPLOC4-217ENST00000574897 TOMM7Q9P0U1 55 aa16.41■□□□□ 0.22
NPLOC4-217ENST00000574897 IGHV3OR16-9A0A0B4J2B5 98 aa16.4■□□□□ 0.22
NPLOC4-217ENST00000574897 CIRBPQ14011 172 aaKnown RBP16.4■□□□□ 0.22
NPLOC4-217ENST00000574897 MEIG1Q5JSS6 88 aa16.4■□□□□ 0.22
NPLOC4-217ENST00000574897 LYRM7Q5U5X0 104 aa16.4■□□□□ 0.22
NPLOC4-217ENST00000574897 SOSTDC1Q6X4U4 206 aa16.4■□□□□ 0.22
NPLOC4-217ENST00000574897 C5orf38Q86SI9 138 aa16.4■□□□□ 0.22
NPLOC4-217ENST00000574897 Q8N3U1 123 aa16.39■□□□□ 0.21
NPLOC4-217ENST00000574897 LINC00308Q8TCZ7 52 aa16.39■□□□□ 0.21
NPLOC4-217ENST00000574897 RNF183Q96D59 192 aa16.39■□□□□ 0.21
NPLOC4-217ENST00000574897 LINC00959A0A1B0GUT2 108 aa16.38■□□□□ 0.21
NPLOC4-217ENST00000574897 MIFP14174 115 aa16.38■□□□□ 0.21
NPLOC4-217ENST00000574897 HTN3P15516 51 aa16.38■□□□□ 0.21
NPLOC4-217ENST00000574897 TRAV26-1A0A087WT03 109 aa16.38■□□□□ 0.21
NPLOC4-217ENST00000574897 KRTAP10-11P60412 298 aa16.37■□□□□ 0.21
NPLOC4-217ENST00000574897 COX7B2Q8TF08 81 aa16.37■□□□□ 0.21
NPLOC4-217ENST00000574897 TRIAP1O43715 76 aa16.37■□□□□ 0.21
NPLOC4-217ENST00000574897 IFITM1P13164 125 aa16.37■□□□□ 0.21
NPLOC4-217ENST00000574897 CMYA5Q8N3K9 4069 aa16.36■□□□□ 0.21
NPLOC4-217ENST00000574897 TRBV20-1A0A075B6N2 111 aa16.35■□□□□ 0.21
NPLOC4-217ENST00000574897 MAST4O15021 2626 aa16.35■□□□□ 0.21
NPLOC4-217ENST00000574897 ATP5G1P05496 136 aa16.35■□□□□ 0.21
NPLOC4-217ENST00000574897 XCL1P47992 114 aa16.34■□□□□ 0.21
NPLOC4-217ENST00000574897 RETNQ9HD89 108 aa16.34■□□□□ 0.21
NPLOC4-217ENST00000574897 ANK2Q01484 3957 aa16.33■□□□□ 0.2
NPLOC4-217ENST00000574897 A0A087WZ39 114 aa16.33■□□□□ 0.2
NPLOC4-217ENST00000574897 A0A1B0GUV1 79 aa16.33■□□□□ 0.2
NPLOC4-217ENST00000574897 SPART-AS1P0CW21 52 aa16.33■□□□□ 0.2
NPLOC4-217ENST00000574897 RPL13AP40429 203 aaKnown RBP16.33■□□□□ 0.2
NPLOC4-217ENST00000574897 ICOSQ9Y6W8 199 aa16.33■□□□□ 0.2
NPLOC4-217ENST00000574897 HERV-K104P63124 156 aa16.31■□□□□ 0.2
NPLOC4-217ENST00000574897 TRBV30A0A0K0K1B3 111 aa16.3■□□□□ 0.2
NPLOC4-217ENST00000574897 C11orf68Q9H3H3 251 aaKnown RBP16.3■□□□□ 0.2
NPLOC4-217ENST00000574897 LINC00269Q8N2A0 174 aa16.29■□□□□ 0.2
NPLOC4-217ENST00000574897 TENM3Q9P273 2699 aa16.29■□□□□ 0.2
NPLOC4-217ENST00000574897 C9JAW5 83 aa16.28■□□□□ 0.2
NPLOC4-217ENST00000574897 SS18Q15532 418 aa16.27■□□□□ 0.19
NPLOC4-217ENST00000574897 C3orf56Q8N813 242 aa16.26■□□□□ 0.19
NPLOC4-217ENST00000574897 IGLV10-54A0A075B6I4 117 aa16.26■□□□□ 0.19
NPLOC4-217ENST00000574897 MIR7-3HGQ8N6C7 128 aa16.26■□□□□ 0.19
NPLOC4-217ENST00000574897 CLEC2BQ92478 149 aa16.25■□□□□ 0.19
NPLOC4-217ENST00000574897 ANGP03950 147 aaKnown RBP16.24■□□□□ 0.19
NPLOC4-217ENST00000574897 CYSRT1A8MQ03 144 aa16.24■□□□□ 0.19
NPLOC4-217ENST00000574897 SLC25A20O43772 301 aa16.23■□□□□ 0.19
NPLOC4-217ENST00000574897 ATXN8Q156A1 80 aa16.22■□□□□ 0.19
NPLOC4-217ENST00000574897 LINC00158P58513 81 aa16.22■□□□□ 0.19
NPLOC4-217ENST00000574897 FOXI1Q12951 378 aa16.22■□□□□ 0.19
NPLOC4-217ENST00000574897 MRPL23Q16540 153 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-217ENST00000574897 LINC01620Q4KN68 170 aa16.22■□□□□ 0.19
NPLOC4-217ENST00000574897 SHISA2Q6UWI4 295 aa16.22■□□□□ 0.19
NPLOC4-217ENST00000574897 NOTCH1P46531 2555 aa16.21■□□□□ 0.19
NPLOC4-217ENST00000574897 PFN2P35080 140 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms