RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 BOD1L2Q8IYS8 172 aa16.24■□□□□ 0.19
ATPAF1-213ENST00000574428 ENHOQ6UWT2 76 aa16.23■□□□□ 0.19
ATPAF1-213ENST00000574428 PCP2Q8IVA1 136 aa16.23■□□□□ 0.19
ATPAF1-213ENST00000574428 UBE2WQ96B02 151 aa16.23■□□□□ 0.19
ATPAF1-213ENST00000574428 PRR34Q9NV39 138 aa16.23■□□□□ 0.19
ATPAF1-213ENST00000574428 LINC00959A0A1B0GUT2 108 aa16.23■□□□□ 0.19
ATPAF1-213ENST00000574428 C11orf86A6NJI1 115 aa16.22■□□□□ 0.19
ATPAF1-213ENST00000574428 CRPP02741 224 aa16.22■□□□□ 0.19
ATPAF1-213ENST00000574428 LBHQ53QV2 105 aaPredicted RBP16.22■□□□□ 0.19
ATPAF1-213ENST00000574428 C2orf91Q6ZV80 131 aa16.22■□□□□ 0.19
ATPAF1-213ENST00000574428 DLEU1O43261 78 aa16.21■□□□□ 0.18
ATPAF1-213ENST00000574428 BATFQ16520 125 aa16.21■□□□□ 0.18
ATPAF1-213ENST00000574428 LINC00242Q5T6M2 205 aa16.21■□□□□ 0.18
ATPAF1-213ENST00000574428 CHAC1Q9BUX1 264 aa16.21■□□□□ 0.18
ATPAF1-213ENST00000574428 DNAH1Q9P2D7 4330 aa16.2■□□□□ 0.18
ATPAF1-213ENST00000574428 IGLV10-54A0A075B6I4 117 aa16.2■□□□□ 0.18
ATPAF1-213ENST00000574428 TTTY13Q9BZ97 58 aa16.19■□□□□ 0.18
ATPAF1-213ENST00000574428 COX6A2Q02221 97 aa16.18■□□□□ 0.18
ATPAF1-213ENST00000574428 SS18Q15532 418 aa16.18■□□□□ 0.18
ATPAF1-213ENST00000574428 KRTAP1-5Q9BYS1 174 aa16.18■□□□□ 0.18
ATPAF1-213ENST00000574428 TINCRA0A1B0GVN0 87 aa16.18■□□□□ 0.18
ATPAF1-213ENST00000574428 HINT1P49773 126 aaPredicted RBP16.18■□□□□ 0.18
ATPAF1-213ENST00000574428 NFE4Q86UQ8 179 aa16.18■□□□□ 0.18
ATPAF1-213ENST00000574428 CCL25O15444 150 aa16.17■□□□□ 0.18
ATPAF1-213ENST00000574428 XCL1P47992 114 aa16.17■□□□□ 0.18
ATPAF1-213ENST00000574428 FAM19A3Q7Z5A8 133 aa16.17■□□□□ 0.18
ATPAF1-213ENST00000574428 C10orf126Q8N4M7 172 aa16.17■□□□□ 0.18
ATPAF1-213ENST00000574428 GEMIN7Q9H840 131 aaKnown RBP16.17■□□□□ 0.18
ATPAF1-213ENST00000574428 VPS13DQ5THJ4 4388 aa16.16■□□□□ 0.18
ATPAF1-213ENST00000574428 IBA57-AS1B1ANH7 110 aa16.16■□□□□ 0.18
ATPAF1-213ENST00000574428 LY6G6CO95867 125 aa16.16■□□□□ 0.18
ATPAF1-213ENST00000574428 Q9HAA7 133 aa16.16■□□□□ 0.18
ATPAF1-213ENST00000574428 LINC00476Q8WZB0 136 aa16.15■□□□□ 0.18
ATPAF1-213ENST00000574428 MIAQ16674 131 aa16.15■□□□□ 0.18
ATPAF1-213ENST00000574428 CHCHD10Q8WYQ3 142 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-213ENST00000574428 E9PLD3 99 aa16.14■□□□□ 0.17
ATPAF1-213ENST00000574428 HERVK_113P63121 156 aa16.14■□□□□ 0.17
ATPAF1-213ENST00000574428 SEC11AP67812 179 aa16.14■□□□□ 0.17
ATPAF1-213ENST00000574428 TMEM170BQ5T4T1 132 aa16.14■□□□□ 0.17
ATPAF1-213ENST00000574428 LINC00469Q8N7U9 141 aa16.14■□□□□ 0.17
ATPAF1-213ENST00000574428 ZNF22P17026 224 aaPredicted RBP16.13■□□□□ 0.17
ATPAF1-213ENST00000574428 K7EP13 123 aa16.13■□□□□ 0.17
ATPAF1-213ENST00000574428 MAPKAPK5-AS1Q8N8E1 139 aa16.13■□□□□ 0.17
ATPAF1-213ENST00000574428 CDKN2A-AS1Q9UH64 79 aa16.13■□□□□ 0.17
ATPAF1-213ENST00000574428 NBDYA0A0U1RRE5 68 aa16.12■□□□□ 0.17
ATPAF1-213ENST00000574428 TRAV8-4A0A0B4J246 113 aa16.11■□□□□ 0.17
ATPAF1-213ENST00000574428 IGLV5-45A0A087WSX0 123 aa16.1■□□□□ 0.17
ATPAF1-213ENST00000574428 TRAV8-3A0A0A6YYJ7 113 aa16.1■□□□□ 0.17
ATPAF1-213ENST00000574428 GAGE12HA6NDE8 117 aa16.1■□□□□ 0.17
ATPAF1-213ENST00000574428 HERVK_113P61574 105 aa16.1■□□□□ 0.17
ATPAF1-213ENST00000574428 IGKV2D-24A0A075B6R9 120 aa16.09■□□□□ 0.17
ATPAF1-213ENST00000574428 IGHV3OR16-9A0A0B4J2B5 98 aa16.09■□□□□ 0.17
ATPAF1-213ENST00000574428 A0A1B0GV90 55 aa16.09■□□□□ 0.17
ATPAF1-213ENST00000574428 TTC32Q5I0X7 151 aa16.09■□□□□ 0.17
ATPAF1-213ENST00000574428 CD164L2Q6UWJ8 174 aa16.09■□□□□ 0.17
ATPAF1-213ENST00000574428 C1orf43Q9BWL3 253 aa16.09■□□□□ 0.17
ATPAF1-213ENST00000574428 ALMS1Q8TCU4 4167 aa16.08■□□□□ 0.17
ATPAF1-213ENST00000574428 M0R2N4 97 aa16.08■□□□□ 0.17
ATPAF1-213ENST00000574428 BVES-AS1Q5T3Y7 98 aa16.08■□□□□ 0.17
ATPAF1-213ENST00000574428 C5orf38Q86SI9 138 aa16.08■□□□□ 0.17
ATPAF1-213ENST00000574428 FOXI1Q12951 378 aa16.08■□□□□ 0.16
ATPAF1-213ENST00000574428 COL5A1-AS1Q5SY13 56 aa16.08■□□□□ 0.16
ATPAF1-213ENST00000574428 KRTAP26-1Q6PEX3 210 aa16.07■□□□□ 0.16
ATPAF1-213ENST00000574428 HIGD1BQ9P298 99 aa16.07■□□□□ 0.16
ATPAF1-213ENST00000574428 TMEM223A0PJW6 202 aa16.06■□□□□ 0.16
ATPAF1-213ENST00000574428 SPINK8P0C7L1 97 aa16.06■□□□□ 0.16
ATPAF1-213ENST00000574428 IGHV3-64A0A075B6Q5 118 aa16.05■□□□□ 0.16
ATPAF1-213ENST00000574428 MYMXA0A1B0GTQ4 84 aa16.05■□□□□ 0.16
ATPAF1-213ENST00000574428 H3BRM9 83 aa16.05■□□□□ 0.16
ATPAF1-213ENST00000574428 HSD52Q0P140 79 aa16.04■□□□□ 0.16
ATPAF1-213ENST00000574428 A0A087WZ39 114 aa16.03■□□□□ 0.16
ATPAF1-213ENST00000574428 COX7A2LO14548 114 aa16.03■□□□□ 0.16
ATPAF1-213ENST00000574428 TSPEAR-AS2P59090 65 aa16.03■□□□□ 0.16
ATPAF1-213ENST00000574428 RMI2Q96E14 147 aa16.02■□□□□ 0.15
ATPAF1-213ENST00000574428 ZNF815PA8K554 130 aa16.01■□□□□ 0.15
ATPAF1-213ENST00000574428 SMIM1B2RUZ4 78 aa16.01■□□□□ 0.15
ATPAF1-213ENST00000574428 Q6ZR54 194 aa16■□□□□ 0.15
ATPAF1-213ENST00000574428 LEPROTO15243 131 aa15.99■□□□□ 0.15
ATPAF1-213ENST00000574428 MALP21145 153 aa15.99■□□□□ 0.15
ATPAF1-213ENST00000574428 J3QQQ9 107 aa15.98■□□□□ 0.15
ATPAF1-213ENST00000574428 IGHV1-58A0A0C4DH39 117 aa15.97■□□□□ 0.15
ATPAF1-213ENST00000574428 KMT2AQ03164 3969 aa15.96■□□□□ 0.15
ATPAF1-213ENST00000574428 IGLV5-39A0A0G2JS06 123 aa15.96■□□□□ 0.15
ATPAF1-213ENST00000574428 ORAOV1Q8WV07 137 aa15.96■□□□□ 0.15
ATPAF1-213ENST00000574428 PLEKHB2Q96CS7 222 aa15.96■□□□□ 0.15
ATPAF1-213ENST00000574428 LGALS3P17931 250 aaKnown RBP15.95■□□□□ 0.14
ATPAF1-213ENST00000574428 TM2D2Q9BX73 214 aa15.95■□□□□ 0.14
ATPAF1-213ENST00000574428 LINC01561Q8N1V8 128 aa15.95■□□□□ 0.14
ATPAF1-213ENST00000574428 COX11Q9Y6N1 276 aa15.95■□□□□ 0.14
ATPAF1-213ENST00000574428 SCGB1D4Q6XE38 83 aa15.92■□□□□ 0.14
ATPAF1-213ENST00000574428 TOMM7Q9P0U1 55 aa15.92■□□□□ 0.14
ATPAF1-213ENST00000574428 DNAH6Q9C0G6 4158 aa15.92■□□□□ 0.14
ATPAF1-213ENST00000574428 PSCAO43653 123 aa15.92■□□□□ 0.14
ATPAF1-213ENST00000574428 GCSHP23434 173 aa15.92■□□□□ 0.14
ATPAF1-213ENST00000574428 TAL2Q16559 108 aa15.92■□□□□ 0.14
ATPAF1-213ENST00000574428 LCE6AA0A183 80 aa15.91■□□□□ 0.14
ATPAF1-213ENST00000574428 APOMO95445 188 aa15.91■□□□□ 0.14
ATPAF1-213ENST00000574428 Q6ZRN7 208 aaPredicted RBP15.91■□□□□ 0.14
ATPAF1-213ENST00000574428 C6orf223Q8N319 242 aa15.91■□□□□ 0.14
ATPAF1-213ENST00000574428 Q6ZVH6 145 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms