RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 C2orf82Q6UX34 121 aa7.42□□□□□ -1.22
USP43-205ENST00000574408 X6R8D5 127 aa7.42□□□□□ -1.22
USP43-205ENST00000574408 TRRAPQ9Y4A5 3859 aa7.41□□□□□ -1.22
USP43-205ENST00000574408 A0A0J9YY99 117 aa7.41□□□□□ -1.22
USP43-205ENST00000574408 FHL2Q14192 279 aa7.41□□□□□ -1.22
USP43-205ENST00000574408 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
USP43-205ENST00000574408 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
USP43-205ENST00000574408 DEFB135Q30KP9 77 aa7.41□□□□□ -1.22
USP43-205ENST00000574408 TIMM21Q9BVV7 248 aa7.41□□□□□ -1.22
USP43-205ENST00000574408 TRAV8-4A0A0B4J246 113 aa7.4□□□□□ -1.22
USP43-205ENST00000574408 TINCRA0A1B0GVN0 87 aa7.4□□□□□ -1.22
USP43-205ENST00000574408 SCGB1A1P11684 91 aa7.4□□□□□ -1.22
USP43-205ENST00000574408 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
USP43-205ENST00000574408 TEN1Q86WV5 123 aa7.4□□□□□ -1.22
USP43-205ENST00000574408 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.22
USP43-205ENST00000574408 UBE2D1P51668 147 aa7.4□□□□□ -1.23
USP43-205ENST00000574408 CLEC2BQ92478 149 aa7.4□□□□□ -1.23
USP43-205ENST00000574408 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 KIR2DL5BQ8NHK3 375 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 UBE2L6O14933 153 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 CFC1BP0CG36 223 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 CFC1P0CG37 223 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 SBSPONQ8IVN8 264 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 WFDC9Q8NEX5 89 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 SMIM9A6NGZ8 99 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 APOC4P55056 127 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 CARD19Q96LW7 228 aa7.39□□□□□ -1.23
USP43-205ENST00000574408 CCDC179H3BU77 68 aa7.38□□□□□ -1.23
USP43-205ENST00000574408 DEFB4AO15263 64 aa7.38□□□□□ -1.23
USP43-205ENST00000574408 CDIP1Q9H305 208 aa7.38□□□□□ -1.23
USP43-205ENST00000574408 IGHV1-58A0A0C4DH39 117 aa7.38□□□□□ -1.23
USP43-205ENST00000574408 LINC00612Q8N6U2 182 aa7.38□□□□□ -1.23
USP43-205ENST00000574408 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
USP43-205ENST00000574408 TRAV13-1A0A0B4J241 112 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 COX6CP09669 75 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 GAGE6Q13070 117 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 FAM222AQ5U5X8 452 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 C10orf126Q8N4M7 172 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 SPATA25Q9BR10 227 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 VSIG2Q96IQ7 327 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 TOMM7Q9P0U1 55 aa7.37□□□□□ -1.23
USP43-205ENST00000574408 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
USP43-205ENST00000574408 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 CDC42SE2Q9NRR3 84 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 STAB1Q9NY15 2570 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 TIRAPP58753 221 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 COX6A2Q02221 97 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 KRTAP24-1Q3LI83 254 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 LINC00242Q5T6M2 205 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 CHCHD5Q9BSY4 110 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 GYPEP15421 78 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 NDUFA12Q9UI09 145 aa7.36□□□□□ -1.23
USP43-205ENST00000574408 IGHV4-28A0A0C4DH34 117 aa7.35□□□□□ -1.23
USP43-205ENST00000574408 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
USP43-205ENST00000574408 HERVK_113P63121 156 aa7.35□□□□□ -1.23
USP43-205ENST00000574408 MRPL23Q16540 153 aaKnown RBP7.35□□□□□ -1.23
USP43-205ENST00000574408 TRBV6-8A0A0A6YYG3 113 aa7.35□□□□□ -1.23
USP43-205ENST00000574408 IFITM1P13164 125 aa7.35□□□□□ -1.23
USP43-205ENST00000574408 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
USP43-205ENST00000574408 IGLV5-45A0A087WSX0 123 aa7.34□□□□□ -1.23
USP43-205ENST00000574408 LYRM9A8MSI8 78 aa7.34□□□□□ -1.23
USP43-205ENST00000574408 IGHV4-30-4P0DP06 118 aa7.34□□□□□ -1.23
USP43-205ENST00000574408 MAST4O15021 2626 aa7.34□□□□□ -1.23
USP43-205ENST00000574408 WIPF1O43516 503 aa7.34□□□□□ -1.23
USP43-205ENST00000574408 OXLD1Q5BKU9 147 aa7.34□□□□□ -1.23
USP43-205ENST00000574408 C11orf68Q9H3H3 251 aaKnown RBP7.33□□□□□ -1.24
USP43-205ENST00000574408 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
USP43-205ENST00000574408 H7C423 109 aa7.33□□□□□ -1.24
USP43-205ENST00000574408 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
USP43-205ENST00000574408 ATP6V0E2Q8NHE4 81 aa7.33□□□□□ -1.24
USP43-205ENST00000574408 A0A096LPF7 62 aa7.33□□□□□ -1.24
USP43-205ENST00000574408 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
USP43-205ENST00000574408 DAD1P61803 113 aa7.32□□□□□ -1.24
USP43-205ENST00000574408 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
USP43-205ENST00000574408 IGLV4-60A0A075B6I1 120 aa7.32□□□□□ -1.24
USP43-205ENST00000574408 PAX4O43316 350 aa7.32□□□□□ -1.24
USP43-205ENST00000574408 Q8NAQ8 132 aa7.32□□□□□ -1.24
USP43-205ENST00000574408 BAHCC1Q9P281 2608 aa7.32□□□□□ -1.24
USP43-205ENST00000574408 CELA1Q9UNI1 258 aa7.31□□□□□ -1.24
USP43-205ENST00000574408 MIFP14174 115 aa7.31□□□□□ -1.24
USP43-205ENST00000574408 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
USP43-205ENST00000574408 NDUFV3P56181 108 aaKnown RBP7.31□□□□□ -1.24
USP43-205ENST00000574408 IGLV5-39A0A0G2JS06 123 aa7.3□□□□□ -1.24
USP43-205ENST00000574408 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
USP43-205ENST00000574408 OR13C6PQ8NH95 151 aa7.3□□□□□ -1.24
USP43-205ENST00000574408 LITAFQ99732 161 aa7.3□□□□□ -1.24
USP43-205ENST00000574408 TRIAP1O43715 76 aa7.3□□□□□ -1.24
USP43-205ENST00000574408 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
USP43-205ENST00000574408 HTN3P15516 51 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 Q9H8V8 135 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 NDUFA1O15239 70 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 KRTAP10-11P60412 298 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 GAGE2AQ6NT46 116 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 F5H768 121 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms