RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CHD7Q9P2D1 2997 aa-1.08□□□□□ -2.58
CDC27-216ENST00000574304 MYO9AB2RTY4 2548 aa-1.08□□□□□ -2.58
CDC27-216ENST00000574304 DNAH11Q96DT5 4516 aa-1.08□□□□□ -2.58
CDC27-216ENST00000574304 ZNF236Q9UL36 1845 aa-1.08□□□□□ -2.58
CDC27-216ENST00000574304 ACACAQ13085 2346 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 DYNC1H1Q14204 4646 aaKnown RBP-1.09□□□□□ -2.58
CDC27-216ENST00000574304 NCR2O95944 276 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 SCIMPQ6UWF3 145 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 DEFB123Q8N688 67 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 TSTD1Q8NFU3 115 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 AQP10Q96PS8 301 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 ACACBO00763 2458 aa-1.09□□□□□ -2.58
CDC27-216ENST00000574304 APOBP04114 4563 aaKnown RBP-1.1□□□□□ -2.58
CDC27-216ENST00000574304 DNAH1Q9P2D7 4330 aa-1.1□□□□□ -2.59
CDC27-216ENST00000574304 B2MP61769 119 aa-1.1□□□□□ -2.59
CDC27-216ENST00000574304 KCNRGQ8N5I3 272 aa-1.1□□□□□ -2.59
CDC27-216ENST00000574304 PRG4Q92954 1404 aaPredicted RBP-1.1□□□□□ -2.59
CDC27-216ENST00000574304 BPTFQ12830 3046 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 HCG22E2RYF7 251 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 SIX6O95475 246 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 MT1HL1P0DM35 61 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 C10orf128Q5T292 105 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 LZICQ8WZA0 190 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 SPEF2Q9C093 1822 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 SACSQ9NZJ4 4579 aa-1.11□□□□□ -2.59
CDC27-216ENST00000574304 IFT140Q96RY7 1462 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 DOCK1Q14185 1865 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 KDM5AP29375 1690 aaKnown RBP-1.12□□□□□ -2.59
CDC27-216ENST00000574304 ARPC5O15511 151 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 PYDC1Q8WXC3 89 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 LENEPQ9Y5L5 61 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 UTP20O75691 2785 aaKnown RBP-1.12□□□□□ -2.59
CDC27-216ENST00000574304 BOD1L1Q8NFC6 3051 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 ZNF518AQ6AHZ1 1483 aa-1.12□□□□□ -2.59
CDC27-216ENST00000574304 RELNP78509 3460 aa-1.13□□□□□ -2.59
CDC27-216ENST00000574304 KIF21AQ7Z4S6 1674 aa-1.13□□□□□ -2.59
CDC27-216ENST00000574304 NSD3Q9BZ95 1437 aa-1.13□□□□□ -2.59
CDC27-216ENST00000574304 DNAH7Q8WXX0 4024 aa-1.13□□□□□ -2.59
CDC27-216ENST00000574304 TRAV13-2A0A0B4J235 113 aa-1.13□□□□□ -2.59
CDC27-216ENST00000574304 GUCA1AP43080 201 aaPredicted RBP-1.13□□□□□ -2.59
CDC27-216ENST00000574304 TPT1P8Q9HAU6 139 aa-1.13□□□□□ -2.59
CDC27-216ENST00000574304 TLN1Q9Y490 2541 aaKnown RBP-1.13□□□□□ -2.59
CDC27-216ENST00000574304 CMYA5Q8N3K9 4069 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 SPAARA0A1B0GVQ0 90 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 APOC3P02656 99 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 ALX1Q15699 326 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 TTC9CQ8N5M4 171 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 GAPVD1Q14C86 1478 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 TRANK1O15050 2925 aa-1.14□□□□□ -2.59
CDC27-216ENST00000574304 ARHGEF12Q9NZN5 1544 aa-1.15□□□□□ -2.59
CDC27-216ENST00000574304 PIGBOS1A0A0B4J2F0 54 aa-1.15□□□□□ -2.59
CDC27-216ENST00000574304 MT1BP07438 61 aa-1.15□□□□□ -2.59
CDC27-216ENST00000574304 COPZ1P61923 177 aa-1.15□□□□□ -2.59
CDC27-216ENST00000574304 BAGE2Q86Y30 109 aa-1.15□□□□□ -2.59
CDC27-216ENST00000574304 AMELXQ99217 191 aa-1.15□□□□□ -2.59
CDC27-216ENST00000574304 POLA1P09884 1462 aaPredicted RBP-1.16□□□□□ -2.59
CDC27-216ENST00000574304 ANKRD30AQ9BXX3 1397 aa-1.16□□□□□ -2.59
CDC27-216ENST00000574304 UQCR11O14957 56 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 DEFA5Q01523 94 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 Q6AWC8 147 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 C9orf62Q8N4C0 152 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 APLNQ9ULZ1 77 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 DNAH5Q8TE73 4624 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 FHAD1B1AJZ9 1412 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 PPIP5K1Q6PFW1 1433 aa-1.16□□□□□ -2.6
CDC27-216ENST00000574304 SBF2Q86WG5 1849 aa-1.17□□□□□ -2.6
CDC27-216ENST00000574304 ARAP2Q8WZ64 1704 aa-1.17□□□□□ -2.6
CDC27-216ENST00000574304 AKAP14Q86UN6 197 aa-1.17□□□□□ -2.6
CDC27-216ENST00000574304 MAFIPQ8WZ33 124 aa-1.17□□□□□ -2.6
CDC27-216ENST00000574304 TLN2Q9Y4G6 2542 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 ADGRG4Q8IZF6 3080 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 TULP4Q9NRJ4 1543 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 SMG1Q96Q15 3661 aaKnown RBP-1.18□□□□□ -2.6
CDC27-216ENST00000574304 F8VRH5 84 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 SYS1-DBNDD2H3BUS1 97 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 HIST1H1DP16402 221 aaKnown RBP-1.18□□□□□ -2.6
CDC27-216ENST00000574304 TPPP2P59282 170 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 RPS25P62851 125 aaKnown RBP-1.18□□□□□ -2.6
CDC27-216ENST00000574304 COPZ2Q9P299 210 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 ZFHX4Q86UP3 3567 aa-1.18□□□□□ -2.6
CDC27-216ENST00000574304 TROQ12816 1431 aaPredicted RBP-1.18□□□□□ -2.6
CDC27-216ENST00000574304 HMGXB3Q12766 1538 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 DOCK2Q92608 1830 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 LINC00959A0A1B0GUT2 108 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 CPSF4LA6NMK7 179 aaKnown RBP-1.19□□□□□ -2.6
CDC27-216ENST00000574304 SMCO1Q147U7 214 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 H1FX-AS1Q4G0G2 97 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 MYOM3Q5VTT5 1437 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 ZFHX3Q15911 3703 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 COL14A1Q05707 1796 aaKnown RBP-1.19□□□□□ -2.6
CDC27-216ENST00000574304 CENPEQ02224 2701 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 TRIOO75962 3097 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 PATJQ8NI35 1801 aa-1.19□□□□□ -2.6
CDC27-216ENST00000574304 RIMS1Q86UR5 1692 aaKnown RBP-1.2□□□□□ -2.6
CDC27-216ENST00000574304 SPENQ96T58 3664 aaKnown RBP-1.2□□□□□ -2.6
CDC27-216ENST00000574304 ADAMTS12P58397 1594 aa-1.2□□□□□ -2.6
CDC27-216ENST00000574304 TCEAL4Q96EI5 215 aa-1.2□□□□□ -2.6
CDC27-216ENST00000574304 NAA60Q9H7X0 242 aa-1.2□□□□□ -2.6
CDC27-216ENST00000574304 NDUFA4L2Q9NRX3 87 aa-1.2□□□□□ -2.6
CDC27-216ENST00000574304 PDE4DIPQ5VU43 2346 aa-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms