RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ZNF720Q7Z2F6 126 aa0.62□□□□□ -2.31
CHD3-217ENST00000574022 KRTAP4-3Q9BYR4 195 aa0.62□□□□□ -2.31
CHD3-217ENST00000574022 C10orf95Q9H7T3 257 aa0.62□□□□□ -2.31
CHD3-217ENST00000574022 LRP6O75581 1613 aa0.62□□□□□ -2.31
CHD3-217ENST00000574022 EDC4Q6P2E9 1401 aaKnown RBP0.62□□□□□ -2.31
CHD3-217ENST00000574022 UACAQ9BZF9 1416 aa0.62□□□□□ -2.31
CHD3-217ENST00000574022 KIF14Q15058 1648 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 MAP3K4Q9Y6R4 1608 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 A0A087WVE0 104 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 CYB5AP00167 134 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 ETDBQ3ZM63 59 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 TMEM263Q8WUH6 116 aaKnown RBP0.61□□□□□ -2.31
CHD3-217ENST00000574022 S100A16Q96FQ6 103 aaKnown RBP0.61□□□□□ -2.31
CHD3-217ENST00000574022 SPRR4Q96PI1 79 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 KNTC1P50748 2209 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 ERCC6L2Q5T890 1561 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 SUPT6HQ7KZ85 1726 aaKnown RBP0.61□□□□□ -2.31
CHD3-217ENST00000574022 POLA1P09884 1462 aaPredicted RBP0.61□□□□□ -2.31
CHD3-217ENST00000574022 IQSEC2Q5JU85 1478 aa0.61□□□□□ -2.31
CHD3-217ENST00000574022 SHPRHQ149N8 1683 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 PLXNB2O15031 1838 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 C7orf77A4D0Y5 90 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 S100A3P33764 101 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 SMIM11AP58511 58 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 PEA15Q15121 130 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 KRTAP5-7Q6L8G8 165 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 SSBP3-AS1Q7Z2R9 100 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 FDCSPQ8NFU4 85 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 LCN9Q8WX39 176 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 FAM103A1Q9BTL3 118 aaKnown RBP0.6□□□□□ -2.31
CHD3-217ENST00000574022 HIGD1BQ9P298 99 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 KNDC1Q76NI1 1749 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 XRN1Q8IZH2 1706 aaKnown RBP0.6□□□□□ -2.31
CHD3-217ENST00000574022 C1orf167Q5SNV9 1468 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 MAGI2Q86UL8 1455 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 ARHGAP35Q9NRY4 1499 aa0.6□□□□□ -2.31
CHD3-217ENST00000574022 MYO7BQ6PIF6 2116 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 C5P01031 1676 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 PLIN4Q96Q06 1357 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 TRBV6-1A0A0K0K1D8 114 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 F8WEM9 126 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 H3BQF6 201 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 BCE1O60756 84 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 ARMS2P0C7Q2 107 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 C10orf113Q5VZT2 155 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 LINC01600Q96MT4 127 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 LINC00846Q9NV44 126 aa0.59□□□□□ -2.31
CHD3-217ENST00000574022 TARBP1Q13395 1621 aaKnown RBP0.59□□□□□ -2.32
CHD3-217ENST00000574022 KMT2BQ9UMN6 2715 aaPredicted RBP0.58□□□□□ -2.32
CHD3-217ENST00000574022 CRYBG1Q9Y4K1 1723 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 MYH4Q9Y623 1939 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 JMJD1CQ15652 2540 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 HMGN3Q15651 99 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 RABAC1Q9UI14 185 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 MYO7AQ13402 2215 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 CUX1P39880 1505 aa0.58□□□□□ -2.32
CHD3-217ENST00000574022 PAPPA2Q9BXP8 1791 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 LAMC1P11047 1609 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 H0Y9P7 68 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 LEPROTL1O95214 131 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 HMGN2P05204 90 aaKnown RBP0.57□□□□□ -2.32
CHD3-217ENST00000574022 SPINK7P58062 85 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 COX6A2Q02221 97 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 DEFB107AQ8IZN7 70 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 PSENENQ9NZ42 101 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 A0A0G2JMZ2 1700 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 DIP2BQ9P265 1576 aa0.57□□□□□ -2.32
CHD3-217ENST00000574022 ALKQ9UM73 1620 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 NAV3Q8IVL0 2385 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 PKD1L3Q7Z443 1732 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 ASH1LQ9NR48 2969 aaKnown RBP0.56□□□□□ -2.32
CHD3-217ENST00000574022 KCPQ6ZWJ8 1503 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 DCAF1Q9Y4B6 1507 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 A0A0D9SFI3 127 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 D6R8Y8 96 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 SNRPFP62306 86 aaKnown RBP0.56□□□□□ -2.32
CHD3-217ENST00000574022 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
CHD3-217ENST00000574022 TDRG1Q3Y452 100 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 MUSTN1Q8IVN3 82 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 S100A13Q99584 98 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 SPCS1Q9Y6A9 102 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 TMEM131LA2VDJ0 1609 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 NHSL1Q5SYE7 1610 aa0.56□□□□□ -2.32
CHD3-217ENST00000574022 ERVK-7P63135 1459 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 NEXMIFQ5QGS0 1516 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 GNGT1P63211 74 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 SPATA8Q6RVD6 105 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 ALKAL2Q6UX46 152 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 C6orf201Q7Z4U5 140 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 CNFNQ9BYD5 112 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 PAPPAQ13219 1627 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 OBSCNQ5VST9 7968 aa0.55□□□□□ -2.32
CHD3-217ENST00000574022 CADP27708 2225 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 CACNA1CQ13936 2221 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 TULP4Q9NRJ4 1543 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 A0A1B0GU69 56 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 KANTRA0A1W2PQU2 76 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 KRTAP5-9P26371 169 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 ADIRFQ15847 76 aa0.54□□□□□ -2.32
CHD3-217ENST00000574022 NMSQ5H8A3 153 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms