RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GAGE12HA6NDE8 117 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 SLC25A20O43772 301 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 FXYD2P54710 66 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 RBMY1FQ15415 496 aaKnown RBP7.27□□□□□ -1.25
SMG6-213ENST00000573166 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 LINC00269Q8N2A0 174 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 C12orf74Q32Q52 190 aa7.26□□□□□ -1.25
SMG6-213ENST00000573166 Q6ZUT4 128 aa7.26□□□□□ -1.25
SMG6-213ENST00000573166 NBEAL1Q6ZS30 2694 aa7.26□□□□□ -1.25
SMG6-213ENST00000573166 NHLRC4P0CG21 123 aaPredicted RBP7.26□□□□□ -1.25
SMG6-213ENST00000573166 C9orf153Q5TBE3 101 aa7.26□□□□□ -1.25
SMG6-213ENST00000573166 SBSPONQ8IVN8 264 aa7.26□□□□□ -1.25
SMG6-213ENST00000573166 EDA2RQ9HAV5 297 aa7.26□□□□□ -1.25
SMG6-213ENST00000573166 TRBV6-5A0A0K0K1A5 114 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 TRBV27A0A0K0K1C4 114 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 J3QQQ9 107 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 SPATA3Q8NHX4 192 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 CRYBA4P53673 196 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 IGLV2-18A0A075B6J9 118 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 IGKV2D-26A0A0A0MRZ7 120 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 LEPROTO15243 131 aa7.25□□□□□ -1.25
SMG6-213ENST00000573166 ASH1LQ9NR48 2969 aaKnown RBP7.25□□□□□ -1.25
SMG6-213ENST00000573166 REG3AQ06141 175 aa7.24□□□□□ -1.25
SMG6-213ENST00000573166 C2orf91Q6ZV80 131 aa7.24□□□□□ -1.25
SMG6-213ENST00000573166 NRACQ8N912 160 aa7.24□□□□□ -1.25
SMG6-213ENST00000573166 CAMK2N2Q96S95 79 aa7.24□□□□□ -1.25
SMG6-213ENST00000573166 OVOL2Q9BRP0 275 aa7.24□□□□□ -1.25
SMG6-213ENST00000573166 HRNRQ86YZ3 2850 aaPredicted RBP7.24□□□□□ -1.25
SMG6-213ENST00000573166 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
SMG6-213ENST00000573166 FHL2Q14192 279 aa7.23□□□□□ -1.25
SMG6-213ENST00000573166 NUPR2A6NF83 97 aa7.23□□□□□ -1.25
SMG6-213ENST00000573166 LELP1Q5T871 98 aa7.23□□□□□ -1.25
SMG6-213ENST00000573166 FAM19A4Q96LR4 140 aa7.23□□□□□ -1.25
SMG6-213ENST00000573166 LY6G6CO95867 125 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 Q9H8V8 135 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 UBE2D3P61077 147 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 UBE2D2P62837 147 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 C11orf72Q8NBR9 251 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 CYSRT1A8MQ03 144 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 INAFM2P0DMQ5 153 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 CELA1Q9UNI1 258 aa7.22□□□□□ -1.25
SMG6-213ENST00000573166 C11orf86A6NJI1 115 aa7.21□□□□□ -1.25
SMG6-213ENST00000573166 TSHBP01222 138 aa7.21□□□□□ -1.25
SMG6-213ENST00000573166 M0R2N4 97 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 KRTAP10-11P60412 298 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 SPAG11BQ08648 103 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 WFDC2Q14508 124 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 X6R8D5 127 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 H7C423 109 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 HIGD1BQ9P298 99 aa7.21□□□□□ -1.26
SMG6-213ENST00000573166 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
SMG6-213ENST00000573166 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
SMG6-213ENST00000573166 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
SMG6-213ENST00000573166 A0A096LNJ9 63 aa7.2□□□□□ -1.26
SMG6-213ENST00000573166 HIST1H4AP62805 103 aaKnown RBP7.2□□□□□ -1.26
SMG6-213ENST00000573166 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
SMG6-213ENST00000573166 RPL32P62910 135 aaKnown RBP7.19□□□□□ -1.26
SMG6-213ENST00000573166 ODF1Q14990 250 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 K7EIL1 84 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 GAGE2AQ6NT46 116 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 Q6ZSN1 163 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
SMG6-213ENST00000573166 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 CFC1P0CG37 223 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 NDUFA1O15239 70 aa7.19□□□□□ -1.26
SMG6-213ENST00000573166 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
SMG6-213ENST00000573166 NTN5Q8WTR8 489 aaPredicted RBP7.18□□□□□ -1.26
SMG6-213ENST00000573166 IFITM1P13164 125 aa7.18□□□□□ -1.26
SMG6-213ENST00000573166 RPL18AQ02543 176 aaKnown RBP7.18□□□□□ -1.26
SMG6-213ENST00000573166 MAPKAPK5-AS1Q8N8E1 139 aa7.18□□□□□ -1.26
SMG6-213ENST00000573166 LAMTOR3Q9UHA4 124 aa7.18□□□□□ -1.26
SMG6-213ENST00000573166 PTH2Q96A98 100 aa7.17□□□□□ -1.26
SMG6-213ENST00000573166 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
SMG6-213ENST00000573166 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
SMG6-213ENST00000573166 B9D2Q9BPU9 175 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 HERV-K104P63124 156 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 MIAQ16674 131 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 Q8NAQ8 132 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 SPANXDQ9BXN6 97 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
SMG6-213ENST00000573166 POM121L12Q8N7R1 296 aa7.15□□□□□ -1.26
SMG6-213ENST00000573166 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.27
SMG6-213ENST00000573166 LECT2O14960 151 aa7.15□□□□□ -1.27
SMG6-213ENST00000573166 UBE2D4Q9Y2X8 147 aa7.15□□□□□ -1.27
SMG6-213ENST00000573166 KIF25-AS1Q9Y6Z4 181 aa7.15□□□□□ -1.27
SMG6-213ENST00000573166 SVEP1Q4LDE5 3571 aa7.15□□□□□ -1.27
SMG6-213ENST00000573166 TENM4Q6N022 2769 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 TEN1Q86WV5 123 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 UBE2BP63146 152 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 E9PLD3 99 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 CXCL5P42830 114 aa7.14□□□□□ -1.27
SMG6-213ENST00000573166 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms