RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-206ENST00000571995 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-206ENST00000571995 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
RAB40B-206ENST00000571995 C11orf72Q8NBR9 251 aa11.62□□□□□ -0.55
RAB40B-206ENST00000571995 CRPP02741 224 aa11.62□□□□□ -0.55
RAB40B-206ENST00000571995 UBE2WQ96B02 151 aa11.62□□□□□ -0.55
RAB40B-206ENST00000571995 CMC4P56277 68 aaPredicted RBP11.61□□□□□ -0.55
RAB40B-206ENST00000571995 TRAV25A0A0B4J276 109 aa11.61□□□□□ -0.55
RAB40B-206ENST00000571995 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
RAB40B-206ENST00000571995 MIR7-3HGQ8N6C7 128 aa11.61□□□□□ -0.55
RAB40B-206ENST00000571995 Q9HAA7 133 aa11.61□□□□□ -0.55
RAB40B-206ENST00000571995 LINC01546A6NGU7 62 aa11.61□□□□□ -0.55
RAB40B-206ENST00000571995 FSHBP01225 129 aa11.61□□□□□ -0.55
RAB40B-206ENST00000571995 DAZ2Q13117 558 aaKnown RBP11.6□□□□□ -0.55
RAB40B-206ENST00000571995 SS18Q15532 418 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 DAZ4Q86SG3 579 aaKnown RBP11.6□□□□□ -0.55
RAB40B-206ENST00000571995 DAZ3Q9NR90 486 aaKnown RBP11.6□□□□□ -0.55
RAB40B-206ENST00000571995 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 TRAV4A0A0B4J268 109 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 RETNQ9HD89 108 aa11.6□□□□□ -0.55
RAB40B-206ENST00000571995 TRIAP1O43715 76 aa11.59□□□□□ -0.55
RAB40B-206ENST00000571995 KRTAP1-3Q8IUG1 177 aa11.59□□□□□ -0.55
RAB40B-206ENST00000571995 SPATA3Q8NHX4 192 aa11.59□□□□□ -0.55
RAB40B-206ENST00000571995 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
RAB40B-206ENST00000571995 EIF4EBP3O60516 100 aaPredicted RBP11.58□□□□□ -0.56
RAB40B-206ENST00000571995 LINC00242Q5T6M2 205 aa11.58□□□□□ -0.56
RAB40B-206ENST00000571995 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.56
RAB40B-206ENST00000571995 ATP5G1P05496 136 aa11.58□□□□□ -0.56
RAB40B-206ENST00000571995 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
RAB40B-206ENST00000571995 FOXI1Q12951 378 aa11.57□□□□□ -0.56
RAB40B-206ENST00000571995 NTM-AS1Q6ZSK4 140 aa11.57□□□□□ -0.56
RAB40B-206ENST00000571995 RNF152Q8N8N0 203 aa11.57□□□□□ -0.56
RAB40B-206ENST00000571995 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
RAB40B-206ENST00000571995 TINCRA0A1B0GVN0 87 aa11.56□□□□□ -0.56
RAB40B-206ENST00000571995 Q8N3U1 123 aa11.56□□□□□ -0.56
RAB40B-206ENST00000571995 TRBV20-1A0A075B6N2 111 aa11.56□□□□□ -0.56
RAB40B-206ENST00000571995 LINC01620Q4KN68 170 aa11.56□□□□□ -0.56
RAB40B-206ENST00000571995 PPDPFLQ8WWR9 84 aa11.56□□□□□ -0.56
RAB40B-206ENST00000571995 SNCGO76070 127 aa11.56□□□□□ -0.56
RAB40B-206ENST00000571995 UBE2D1P51668 147 aa11.55□□□□□ -0.56
RAB40B-206ENST00000571995 RPL32P62910 135 aaKnown RBP11.55□□□□□ -0.56
RAB40B-206ENST00000571995 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
RAB40B-206ENST00000571995 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
RAB40B-206ENST00000571995 MRPS36P82909 103 aaKnown RBP11.55□□□□□ -0.56
RAB40B-206ENST00000571995 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
RAB40B-206ENST00000571995 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
RAB40B-206ENST00000571995 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
RAB40B-206ENST00000571995 MIAQ16674 131 aa11.54□□□□□ -0.56
RAB40B-206ENST00000571995 APOC4P55056 127 aa11.53□□□□□ -0.56
RAB40B-206ENST00000571995 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
RAB40B-206ENST00000571995 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
RAB40B-206ENST00000571995 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
RAB40B-206ENST00000571995 TEN1Q86WV5 123 aa11.53□□□□□ -0.56
RAB40B-206ENST00000571995 MT-ATP8P03928 68 aa11.52□□□□□ -0.56
RAB40B-206ENST00000571995 PRO0255Q9UI72 69 aa11.52□□□□□ -0.56
RAB40B-206ENST00000571995 IGHV4-28A0A0C4DH34 117 aa11.52□□□□□ -0.57
RAB40B-206ENST00000571995 Q8N2B8 174 aa11.52□□□□□ -0.57
RAB40B-206ENST00000571995 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.57
RAB40B-206ENST00000571995 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.57
RAB40B-206ENST00000571995 TRBV10-1A0A0K0K1A3 114 aa11.51□□□□□ -0.57
RAB40B-206ENST00000571995 PRR3P79522 188 aaKnown RBP11.51□□□□□ -0.57
RAB40B-206ENST00000571995 GAGE2AQ6NT46 116 aa11.51□□□□□ -0.57
RAB40B-206ENST00000571995 UBE2D3P61077 147 aa11.51□□□□□ -0.57
RAB40B-206ENST00000571995 UBE2D2P62837 147 aa11.51□□□□□ -0.57
RAB40B-206ENST00000571995 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
RAB40B-206ENST00000571995 AMELXQ99217 191 aa11.51□□□□□ -0.57
RAB40B-206ENST00000571995 LINC00308Q8TCZ7 52 aa11.5□□□□□ -0.57
RAB40B-206ENST00000571995 CDC42SE2Q9NRR3 84 aa11.5□□□□□ -0.57
RAB40B-206ENST00000571995 SLPIP03973 132 aa11.5□□□□□ -0.57
RAB40B-206ENST00000571995 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
RAB40B-206ENST00000571995 SMCPP49901 116 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-206ENST00000571995 SMIM1B2RUZ4 78 aa11.48□□□□□ -0.57
RAB40B-206ENST00000571995 SPART-AS1P0CW21 52 aa11.48□□□□□ -0.57
RAB40B-206ENST00000571995 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
RAB40B-206ENST00000571995 COPS9Q8WXC6 57 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 NCR3O14931 201 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 XAGE1AQ9HD64 81 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
RAB40B-206ENST00000571995 FHL2Q14192 279 aa11.46□□□□□ -0.57
RAB40B-206ENST00000571995 IGKV2D-24A0A075B6R9 120 aa11.46□□□□□ -0.57
RAB40B-206ENST00000571995 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.57
RAB40B-206ENST00000571995 KRTAP10-3P60369 221 aa11.46□□□□□ -0.57
RAB40B-206ENST00000571995 FHL3Q13643 280 aa11.45□□□□□ -0.58
RAB40B-206ENST00000571995 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
RAB40B-206ENST00000571995 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
RAB40B-206ENST00000571995 BAALC-AS2P0C853 105 aa11.44□□□□□ -0.58
RAB40B-206ENST00000571995 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
RAB40B-206ENST00000571995 TRBV6-4A0A1B0GX49 114 aa11.44□□□□□ -0.58
RAB40B-206ENST00000571995 COX7A2LO14548 114 aa11.44□□□□□ -0.58
RAB40B-206ENST00000571995 ANAPC13Q9BS18 74 aa11.44□□□□□ -0.58
RAB40B-206ENST00000571995 CELA1Q9UNI1 258 aa11.44□□□□□ -0.58
RAB40B-206ENST00000571995 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
RAB40B-206ENST00000571995 ZNF469Q96JG9 3925 aaPredicted RBP11.43□□□□□ -0.58
RAB40B-206ENST00000571995 LECT2O14960 151 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms