RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 LELP1Q5T871 98 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 Q6ZTC4 211 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 CDKN2A-AS1Q9UH64 79 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 IGHV3-64A0A075B6Q5 118 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 A6NDN8 102 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 TMEM262E9PQX1 116 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 SPINK8P0C7L1 97 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 NANOS2P60321 138 aaKnown RBP4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 CEND1Q8N111 149 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 C11orf45Q8TAV5 145 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 SPANXB1Q9NS25 103 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC1-204ENST00000571947 DEFB131BA0A096LNP1 70 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 LINC00959A0A1B0GUT2 108 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 SMIM1B2RUZ4 78 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 TAX1BP3O14907 124 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 CCL25O15444 150 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 GCSHP23434 173 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 FXYD2P54710 66 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 SS18Q15532 418 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 ZFAND6Q6FIF0 208 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 LYPD5Q6UWN5 251 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 MRAPQ8TCY5 172 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
TRAPPC1-204ENST00000571947 TRAV10A0A0B4J240 114 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 IGKV3OR2-268A0A0C4DH90 116 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 A0A0J9YXY3 114 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 NDUFA1O15239 70 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 C10orf126Q8N4M7 172 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 NDUFA12Q9UI09 145 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 ANK2Q01484 3957 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 MGAM2Q2M2H8 2515 aa4.21□□□□□ -1.74
TRAPPC1-204ENST00000571947 A0A087WZ39 114 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 TIMM17BO60830 172 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 IGHV3-30P01768 117 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 SMIM13P0DJ93 91 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 IGHV3-30-5P0DP03 117 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 PTTG1IPP53801 180 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 LINC01561Q8N1V8 128 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 COX11Q9Y6N1 276 aa4.2□□□□□ -1.74
TRAPPC1-204ENST00000571947 A0A1B0GWB2 263 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 TMEM238C9JI98 176 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 K7EP13 123 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 ANGP03950 147 aaKnown RBP4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 REG3AQ06141 175 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 Q6ZVH6 145 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 LINC00269Q8N2A0 174 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 Q8N3U1 123 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 COX7B2Q8TF08 81 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 LITAFQ99732 161 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 B9D2Q9BPU9 175 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 NHP2Q9NX24 153 aaKnown RBP4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 SPANXCQ9NY87 97 aa4.19□□□□□ -1.74
TRAPPC1-204ENST00000571947 C9orf118A6NHY6 69 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 XCL1P47992 114 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 HERV-K104P63124 156 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 ESRGQ1W209 222 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 CLPSL2Q6UWE3 100 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 Q9H8V8 135 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 PRR34Q9NV39 138 aa4.18□□□□□ -1.74
TRAPPC1-204ENST00000571947 CIRBPQ14011 172 aaKnown RBP4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 MIAQ16674 131 aa4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 ADAMTSL4-AS1Q5T5F5 129 aa4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 WFDC10BQ8IUB3 73 aa4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 MUSTN1Q8IVN3 82 aa4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 CHCHD10Q8WYQ3 142 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 RAB37Q96AX2 223 aa4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 KLK12Q9UKR0 248 aa4.17□□□□□ -1.74
TRAPPC1-204ENST00000571947 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 K7ERJ3 54 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 COX7A2LO14548 114 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 IGHV3-33P01772 117 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 IFITM1P13164 125 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 RPL24P83731 157 aaKnown RBP4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 FOXI1Q12951 378 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 SFTA2Q6UW10 78 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 ENHOQ6UWT2 76 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 Q8IZM0 81 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 TOMM7Q9P0U1 55 aa4.16□□□□□ -1.74
TRAPPC1-204ENST00000571947 IGLV10-54A0A075B6I4 117 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 A4D1N5 150 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 GAGE12HA6NDE8 117 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 IGLL5B9A064 214 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 H3BUT2 72 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 APOMO95445 188 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 CRPP02741 224 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 PRSS2P07478 247 aa4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 NHLRC4P0CG21 123 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC1-204ENST00000571947 CFC1BP0CG36 223 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms