RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 K7EP13 123 aa12.04□□□□□ -0.48
RPAIN-208ENST00000571043 COX6A2Q02221 97 aa12.04□□□□□ -0.48
RPAIN-208ENST00000571043 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPAIN-208ENST00000571043 C11orf68Q9H3H3 251 aaKnown RBP12.04□□□□□ -0.48
RPAIN-208ENST00000571043 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
RPAIN-208ENST00000571043 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
RPAIN-208ENST00000571043 TMEM238LA0A1B0GVL6 79 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 A6NJY4 79 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 F5H768 121 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
RPAIN-208ENST00000571043 TGP01266 2768 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 VAMP3Q15836 100 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 ZFAND6Q6FIF0 208 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
RPAIN-208ENST00000571043 A0A0J9YXY3 114 aa12□□□□□ -0.49
RPAIN-208ENST00000571043 UBE2V1Q13404 147 aa12□□□□□ -0.49
RPAIN-208ENST00000571043 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
RPAIN-208ENST00000571043 C12orf74Q32Q52 190 aa12□□□□□ -0.49
RPAIN-208ENST00000571043 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
RPAIN-208ENST00000571043 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
RPAIN-208ENST00000571043 RAB37Q96AX2 223 aa11.99□□□□□ -0.49
RPAIN-208ENST00000571043 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
RPAIN-208ENST00000571043 SMIM1B2RUZ4 78 aa11.97□□□□□ -0.49
RPAIN-208ENST00000571043 ICOSQ9Y6W8 199 aa11.97□□□□□ -0.49
RPAIN-208ENST00000571043 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
RPAIN-208ENST00000571043 A0A096LPF7 62 aa11.96□□□□□ -0.49
RPAIN-208ENST00000571043 TMEM262E9PQX1 116 aa11.96□□□□□ -0.49
RPAIN-208ENST00000571043 H3BUT2 72 aa11.96□□□□□ -0.49
RPAIN-208ENST00000571043 K7ERJ3 54 aa11.96□□□□□ -0.49
RPAIN-208ENST00000571043 RBX1P62877 108 aa11.96□□□□□ -0.49
RPAIN-208ENST00000571043 NDUFA1O15239 70 aa11.96□□□□□ -0.5
RPAIN-208ENST00000571043 HTN3P15516 51 aa11.96□□□□□ -0.5
RPAIN-208ENST00000571043 TIMM17BO60830 172 aa11.95□□□□□ -0.5
RPAIN-208ENST00000571043 H3BNG1 76 aa11.94□□□□□ -0.5
RPAIN-208ENST00000571043 LITAFQ99732 161 aa11.94□□□□□ -0.5
RPAIN-208ENST00000571043 LINC00959A0A1B0GUT2 108 aa11.93□□□□□ -0.5
RPAIN-208ENST00000571043 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
RPAIN-208ENST00000571043 CCL25O15444 150 aa11.93□□□□□ -0.5
RPAIN-208ENST00000571043 C11orf45Q8TAV5 145 aa11.93□□□□□ -0.5
RPAIN-208ENST00000571043 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
RPAIN-208ENST00000571043 SPANXCQ9NY87 97 aa11.93□□□□□ -0.5
RPAIN-208ENST00000571043 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
RPAIN-208ENST00000571043 IGLL5B9A064 214 aa11.92□□□□□ -0.5
RPAIN-208ENST00000571043 LELP1Q5T871 98 aa11.92□□□□□ -0.5
RPAIN-208ENST00000571043 FABP2P12104 132 aa11.91□□□□□ -0.5
RPAIN-208ENST00000571043 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
RPAIN-208ENST00000571043 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
RPAIN-208ENST00000571043 SS18Q15532 418 aa11.91□□□□□ -0.5
RPAIN-208ENST00000571043 GTF2H5Q6ZYL4 71 aa11.91□□□□□ -0.5
RPAIN-208ENST00000571043 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
RPAIN-208ENST00000571043 GAGE10A6NGK3 116 aa11.9□□□□□ -0.5
RPAIN-208ENST00000571043 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
RPAIN-208ENST00000571043 Q9H8V8 135 aa11.9□□□□□ -0.5
RPAIN-208ENST00000571043 A0A087WZ39 114 aa11.89□□□□□ -0.51
RPAIN-208ENST00000571043 K7EP34 96 aa11.89□□□□□ -0.51
RPAIN-208ENST00000571043 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
RPAIN-208ENST00000571043 HERV-K104P63124 156 aa11.89□□□□□ -0.51
RPAIN-208ENST00000571043 MIAQ16674 131 aa11.89□□□□□ -0.51
RPAIN-208ENST00000571043 ZNF625Q96I27 306 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-208ENST00000571043 CIRBPQ14011 172 aaKnown RBP11.88□□□□□ -0.51
RPAIN-208ENST00000571043 LINC01561Q8N1V8 128 aa11.88□□□□□ -0.51
RPAIN-208ENST00000571043 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
RPAIN-208ENST00000571043 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-208ENST00000571043 A4D1N5 150 aa11.87□□□□□ -0.51
RPAIN-208ENST00000571043 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
RPAIN-208ENST00000571043 CFC1P0CG37 223 aa11.87□□□□□ -0.51
RPAIN-208ENST00000571043 IFITM1P13164 125 aa11.87□□□□□ -0.51
RPAIN-208ENST00000571043 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
RPAIN-208ENST00000571043 Q6ZTC4 211 aa11.87□□□□□ -0.51
RPAIN-208ENST00000571043 APOMO95445 188 aa11.86□□□□□ -0.51
RPAIN-208ENST00000571043 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
RPAIN-208ENST00000571043 SPCS1Q9Y6A9 102 aa11.86□□□□□ -0.51
RPAIN-208ENST00000571043 A0A0B4J2C4 111 aa11.86□□□□□ -0.51
RPAIN-208ENST00000571043 LYPD5Q6UWN5 251 aa11.86□□□□□ -0.51
RPAIN-208ENST00000571043 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
RPAIN-208ENST00000571043 PRSS2P07478 247 aa11.85□□□□□ -0.51
RPAIN-208ENST00000571043 LINC00269Q8N2A0 174 aa11.85□□□□□ -0.51
RPAIN-208ENST00000571043 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
RPAIN-208ENST00000571043 C5orf38Q86SI9 138 aa11.84□□□□□ -0.51
RPAIN-208ENST00000571043 PRO1854Q9UHT4 67 aa11.84□□□□□ -0.51
RPAIN-208ENST00000571043 XCL1P47992 114 aa11.83□□□□□ -0.52
RPAIN-208ENST00000571043 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
RPAIN-208ENST00000571043 CSMD3Q7Z407 3707 aa11.82□□□□□ -0.52
RPAIN-208ENST00000571043 TSPAN13O95857 204 aa11.82□□□□□ -0.52
RPAIN-208ENST00000571043 REG3AQ06141 175 aa11.82□□□□□ -0.52
RPAIN-208ENST00000571043 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
RPAIN-208ENST00000571043 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
RPAIN-208ENST00000571043 DEFB131BA0A096LNP1 70 aa11.81□□□□□ -0.52
RPAIN-208ENST00000571043 TRAV10A0A0B4J240 114 aa11.81□□□□□ -0.52
RPAIN-208ENST00000571043 CLPSL2Q6UWE3 100 aa11.81□□□□□ -0.52
RPAIN-208ENST00000571043 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
RPAIN-208ENST00000571043 PPDPFQ9H3Y8 114 aa11.81□□□□□ -0.52
RPAIN-208ENST00000571043 Q8N3U1 123 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms