RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 HIGD1CA8MV81 97 aa2.53□□□□□ -2
SMG6-208ENST00000570874 TIMM17BO60830 172 aa2.53□□□□□ -2
SMG6-208ENST00000570874 FUSP35637 526 aaKnown RBP eCLIP2.53□□□□□ -2
SMG6-208ENST00000570874 CRIP2P52943 208 aaPredicted RBP2.53□□□□□ -2
SMG6-208ENST00000570874 PDE6HQ13956 83 aa2.53□□□□□ -2
SMG6-208ENST00000570874 CIRBPQ14011 172 aaKnown RBP2.53□□□□□ -2
SMG6-208ENST00000570874 WFDC2Q14508 124 aa2.53□□□□□ -2
SMG6-208ENST00000570874 KLK9Q2XQG4 91 aa2.53□□□□□ -2
SMG6-208ENST00000570874 CEMP1Q6PRD7 247 aaPredicted RBP2.53□□□□□ -2
SMG6-208ENST00000570874 REG3GQ6UW15 175 aa2.53□□□□□ -2
SMG6-208ENST00000570874 Q6YL49 198 aa2.53□□□□□ -2
SMG6-208ENST00000570874 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.53□□□□□ -2
SMG6-208ENST00000570874 Q9H3A6 140 aa2.53□□□□□ -2
SMG6-208ENST00000570874 XAGE1AQ9HD64 81 aa2.53□□□□□ -2
SMG6-208ENST00000570874 KLK9Q9UKQ9 250 aa2.53□□□□□ -2
SMG6-208ENST00000570874 SMAD5-AS1Q9Y6J3 95 aa2.53□□□□□ -2
SMG6-208ENST00000570874 PTPN13Q12923 2485 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 A0A087WW49 117 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 A0A087X002 238 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 IGLV5-39A0A0G2JS06 123 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 A0A1B0GUT8 65 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 hADV29S1A0JD25 119 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 LINC01549A6NIU2 74 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 M0R3E3 92 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 COX8AP10176 69 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 CD28P10747 220 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 DEFB1P60022 68 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 EGFEM1PQ0D2K5 195 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 ASB16-AS1Q495Z4 193 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 CASC10Q5T4H9 136 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 LINC00322Q6ZN03 302 aaPredicted RBP2.52□□□□□ -2.01
SMG6-208ENST00000570874 ATP11AUNQ6ZP68 121 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 SH2D6Q7Z4S9 175 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 NFE4Q86UQ8 179 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 CEND1Q8N111 149 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 POM121L12Q8N7R1 296 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 GTSF1Q8WW33 167 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 C8orf49Q96NF6 230 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 SCRT2Q9NQ03 307 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 PRO0461Q9UI25 63 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 APCP25054 2843 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 CUBNO60494 3623 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 AKAP9Q99996 3911 aa2.52□□□□□ -2.01
SMG6-208ENST00000570874 USP9YO00507 2555 aaPredicted RBP2.52□□□□□ -2.01
SMG6-208ENST00000570874 TENM4Q6N022 2769 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 TEX15Q9BXT5 2789 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 SONP18583 2426 aaKnown RBP2.51□□□□□ -2.01
SMG6-208ENST00000570874 ITPR3Q14573 2671 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 MAST4O15021 2626 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 ABCA12Q86UK0 2595 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 IGKV2-40A0A087WW87 121 aaPredicted RBP2.51□□□□□ -2.01
SMG6-208ENST00000570874 TRBV7-1A0A0A6YYK4 115 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 TRAV2A0A0B4J234 112 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 IGHV3-16A0A0C4DH30 117 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 PRAC2D3DTV9 90 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 F2Z2F3 143 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 K7EMI3 77 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 LEPROTO15243 131 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 SPINK4O60575 86 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 LY6G6DO95868 133 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 IGKV2D-40P01614 121 aaPredicted RBP2.51□□□□□ -2.01
SMG6-208ENST00000570874 IGLV2-11P01706 119 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 CKS2P33552 79 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 SLURP1P55000 103 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 SS18Q15532 418 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 DEFB136Q30KP8 78 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 C10orf25Q5T742 122 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 C2orf66Q6UXQ4 117 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 Q6ZRP5 223 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 Q86TA4 180 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 ORMDL3Q8N138 153 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 FAM19A2Q8N3H0 131 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 SERP2Q8N6R1 65 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 Q8N8P6 123 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 HIGD1BQ9P298 99 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 CELA1Q9UNI1 258 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 U3KQK5 164 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 ZANQ9Y493 2812 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 ACANP16112 2415 aa2.51□□□□□ -2.01
SMG6-208ENST00000570874 FLNBO75369 2602 aaKnown RBP2.51□□□□□ -2.01
SMG6-208ENST00000570874 IGKV3-7A0A075B6H7 116 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 IGLV4-3A0A075B6K6 122 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 IGHV1-24A0A0C4DH33 117 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 LINC01546A6NGU7 62 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 FAM223BA6NKX1 122 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 CYSRT1A8MQ03 144 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 ACYP1P07311 99 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 FXYD7P58549 80 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 C9orf66Q5T8R8 295 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 FAM104BQ5XKR9 115 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 Q6ZQT7 251 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 FAM223AQ8IWN6 122 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 Q8TAT8 98 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 SCGB3A1Q96QR1 104 aa2.5□□□□□ -2.01
SMG6-208ENST00000570874 UPK3BQ9BT76 320 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms