RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 KALRNO60229 2985 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 MYLKQ15746 1914 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 CHD9Q3L8U1 2897 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 FRYQ5TBA9 3013 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 IGLV3-32A0A0A0MS00 114 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 HIGD1CA8MV81 97 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 PDE6GP18545 87 aa2.3□□□□□ -2.04
CHD9-220ENST00000569794 FAM208AQ9UK61 1670 aaKnown RBP2.3□□□□□ -2.04
CHD9-220ENST00000569794 COL11A1P12107 1806 aaPredicted RBP2.3□□□□□ -2.04
CHD9-220ENST00000569794 DMXL1Q9Y485 3027 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 PRRC2BQ5JSZ5 2229 aaKnown RBP2.29□□□□□ -2.04
CHD9-220ENST00000569794 TECTAO75443 2155 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 AFDNP55196 1824 aaKnown RBP2.29□□□□□ -2.04
CHD9-220ENST00000569794 LRRC37A2A6NM11 1700 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 TJP1Q07157 1748 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 SFT2D2O95562 160 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 UBE2D1P51668 147 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 S100A13Q99584 98 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 IGSF10Q6WRI0 2623 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 SPTA1P02549 2419 aa2.29□□□□□ -2.04
CHD9-220ENST00000569794 CEP295Q9C0D2 2601 aa2.28□□□□□ -2.04
CHD9-220ENST00000569794 LOC730098B7Z3J9 87 aa2.28□□□□□ -2.04
CHD9-220ENST00000569794 TRAPPC2P0DI81 140 aa2.28□□□□□ -2.04
CHD9-220ENST00000569794 TRAPPC2BP0DI82 140 aa2.28□□□□□ -2.04
CHD9-220ENST00000569794 LINC00322Q6ZN03 302 aaPredicted RBP2.28□□□□□ -2.04
CHD9-220ENST00000569794 C20orf197Q8N268 126 aa2.28□□□□□ -2.04
CHD9-220ENST00000569794 S100A16Q96FQ6 103 aaKnown RBP2.28□□□□□ -2.04
CHD9-220ENST00000569794 SNURFQ9Y675 71 aa2.28□□□□□ -2.04
CHD9-220ENST00000569794 ANKRD26Q9UPS8 1709 aa2.28□□□□□ -2.05
CHD9-220ENST00000569794 NBEAQ8NFP9 2946 aa2.28□□□□□ -2.05
CHD9-220ENST00000569794 MCM3APO60318 1980 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 SPTAN1Q13813 2472 aaKnown RBP2.27□□□□□ -2.05
CHD9-220ENST00000569794 DSPP15924 2871 aaKnown RBP2.27□□□□□ -2.05
CHD9-220ENST00000569794 TRBV7-3A0A075B6L6 115 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 TRGV2A0A075B6R0 118 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 TRBV7-7A0A0K0K1E9 115 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 LOC101927531A0A1B0GV80 90 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 NDUFC1O43677 76 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 APOC3P02656 99 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 NMBP08949 121 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 RPL37AP61513 92 aaKnown RBP2.27□□□□□ -2.05
CHD9-220ENST00000569794 SSBP1Q04837 148 aaKnown RBP2.27□□□□□ -2.05
CHD9-220ENST00000569794 SPATA45Q537H7 98 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 C6orf52Q5T4I8 152 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 SERP2Q8N6R1 65 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 C20orf78Q9BR46 151 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 UQCR10Q9UDW1 63 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 COL4A2P08572 1712 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 MICAL3Q7RTP6 2002 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 NAV3Q8IVL0 2385 aa2.27□□□□□ -2.05
CHD9-220ENST00000569794 ZSWIM8A7E2V4 1837 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 CHKB-CPT1BH3BT56 60 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 Q6ZRN7 208 aaPredicted RBP2.26□□□□□ -2.05
CHD9-220ENST00000569794 AMELYQ99218 206 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 TRGV9Q99603 122 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 TRIOO75962 3097 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 LTN1O94822 1766 aa2.26□□□□□ -2.05
CHD9-220ENST00000569794 SETD2Q9BYW2 2564 aaPredicted RBP2.25□□□□□ -2.05
CHD9-220ENST00000569794 CREBBPQ92793 2442 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 EDDM3BP56851 147 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 NUMA1Q14980 2115 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 TDRG1Q3Y452 100 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 SFTA2Q6UW10 78 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 ZNF720Q7Z2F6 126 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 NXT2Q9NPJ8 142 aaKnown RBP2.25□□□□□ -2.05
CHD9-220ENST00000569794 CACFD1Q9UGQ2 172 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 POLQO75417 2590 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 EDC4Q6P2E9 1401 aaKnown RBP2.25□□□□□ -2.05
CHD9-220ENST00000569794 SCN7AQ01118 1682 aa2.25□□□□□ -2.05
CHD9-220ENST00000569794 KIAA1549LQ6ZVL6 1849 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 J3QRE1 110 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 INE1O15225 51 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 FXYD4P59646 89 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 ZNF56Q15929 161 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 BRD3OSQ6XYD6 125 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 PRO1854Q9UHT4 67 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 DDX60LQ5H9U9 1706 aaKnown RBP2.24□□□□□ -2.05
CHD9-220ENST00000569794 WDFY3Q8IZQ1 3526 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 RELNP78509 3460 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 ZNF831Q5JPB2 1677 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 IGF2RP11717 2491 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 ZFHX3Q15911 3703 aa2.24□□□□□ -2.05
CHD9-220ENST00000569794 NF1P21359 2839 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 A0A0G2JMZ2 1700 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 ARAP2Q8WZ64 1704 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 A0A0G2JND7 137 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 SYS1-DBNDD2H3BUS1 97 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 PPP1R17O96001 155 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 FAM74A4Q5TZK3 123 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 ALKAL2Q6UX46 152 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 KRTAP13-1Q8IUC0 172 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 CHD7Q9P2D1 2997 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 LAMA5O15230 3695 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms