RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 SMIM1B2RUZ4 78 aa15.45■□□□□ 0.06
VCPKMT-205ENST00000569518 TAL2Q16559 108 aa15.45■□□□□ 0.06
VCPKMT-205ENST00000569518 SCGB1D4Q6XE38 83 aa15.45■□□□□ 0.06
VCPKMT-205ENST00000569518 ORAOV1Q8WV07 137 aa15.44■□□□□ 0.06
VCPKMT-205ENST00000569518 A0A1B0GV90 55 aa15.43■□□□□ 0.06
VCPKMT-205ENST00000569518 TRAV10A0A0B4J240 114 aa15.42■□□□□ 0.06
VCPKMT-205ENST00000569518 IGHV3OR16-9A0A0B4J2B5 98 aa15.42■□□□□ 0.06
VCPKMT-205ENST00000569518 ZFAND6Q6FIF0 208 aa15.42■□□□□ 0.06
VCPKMT-205ENST00000569518 C10orf126Q8N4M7 172 aa15.42■□□□□ 0.06
VCPKMT-205ENST00000569518 B9D2Q9BPU9 175 aa15.42■□□□□ 0.06
VCPKMT-205ENST00000569518 TM2D2Q9BX73 214 aa15.42■□□□□ 0.06
VCPKMT-205ENST00000569518 CEND1Q8N111 149 aa15.41■□□□□ 0.06
VCPKMT-205ENST00000569518 HIST1H4GQ99525 98 aa15.4■□□□□ 0.06
VCPKMT-205ENST00000569518 GCSHP23434 173 aa15.4■□□□□ 0.06
VCPKMT-205ENST00000569518 FXYD2P54710 66 aa15.4■□□□□ 0.06
VCPKMT-205ENST00000569518 LINC00269Q8N2A0 174 aa15.4■□□□□ 0.06
VCPKMT-205ENST00000569518 NDUFA12Q9UI09 145 aa15.4■□□□□ 0.06
VCPKMT-205ENST00000569518 DNAH9Q9NYC9 4486 aa15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 CCL25O15444 150 aa15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 ANGP03950 147 aaKnown RBP15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 CLPSL2Q6UWE3 100 aa15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 SPANXB1Q9NS25 103 aaPredicted RBP15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 COL7A1Q02388 2944 aa15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 A0A0J9YXY3 114 aa15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 SS18Q15532 418 aa15.38■□□□□ 0.05
VCPKMT-205ENST00000569518 A0A087WZ39 114 aa15.37■□□□□ 0.05
VCPKMT-205ENST00000569518 K7EP13 123 aa15.37■□□□□ 0.05
VCPKMT-205ENST00000569518 ESRGQ1W209 222 aa15.37■□□□□ 0.05
VCPKMT-205ENST00000569518 NDUFA1O15239 70 aa15.36■□□□□ 0.05
VCPKMT-205ENST00000569518 REG3AQ06141 175 aa15.36■□□□□ 0.05
VCPKMT-205ENST00000569518 A6NDN8 102 aa15.36■□□□□ 0.05
VCPKMT-205ENST00000569518 STAB2Q8WWQ8 2551 aa15.36■□□□□ 0.05
VCPKMT-205ENST00000569518 TAX1BP3O14907 124 aa15.34■□□□□ 0.05
VCPKMT-205ENST00000569518 XCL1P47992 114 aa15.34■□□□□ 0.05
VCPKMT-205ENST00000569518 WFDC10BQ8IUB3 73 aa15.34■□□□□ 0.05
VCPKMT-205ENST00000569518 PRR34Q9NV39 138 aa15.34■□□□□ 0.05
VCPKMT-205ENST00000569518 KRTAP21-3Q3LHN1 58 aa15.33■□□□□ 0.05
VCPKMT-205ENST00000569518 LITAFQ99732 161 aa15.33■□□□□ 0.05
VCPKMT-205ENST00000569518 DNHD1Q96M86 4753 aa15.33■□□□□ 0.05
VCPKMT-205ENST00000569518 SRSF9Q13242 221 aaKnown RBP eCLIP15.33■□□□□ 0.04
VCPKMT-205ENST00000569518 C15orf53Q8NAA6 179 aa15.33■□□□□ 0.04
VCPKMT-205ENST00000569518 Q6ZVH6 145 aa15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 C5orf38Q86SI9 138 aa15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 ZNF625Q96I27 306 aaPredicted RBP15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 IGHV3-30P01768 117 aa15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 IGHV3-30-5P0DP03 117 aa15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 PTTG1IPP53801 180 aa15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 CHCHD10Q8WYQ3 142 aaPredicted RBP15.31■□□□□ 0.04
VCPKMT-205ENST00000569518 TMEM238C9JI98 176 aa15.3■□□□□ 0.04
VCPKMT-205ENST00000569518 CD164L2Q6UWJ8 174 aa15.3■□□□□ 0.04
VCPKMT-205ENST00000569518 Q9H8V8 135 aa15.3■□□□□ 0.04
VCPKMT-205ENST00000569518 KLK12Q9UKR0 248 aa15.3■□□□□ 0.04
VCPKMT-205ENST00000569518 LINC01561Q8N1V8 128 aa15.29■□□□□ 0.04
VCPKMT-205ENST00000569518 COX11Q9Y6N1 276 aa15.29■□□□□ 0.04
VCPKMT-205ENST00000569518 IGHV3-33P01772 117 aa15.29■□□□□ 0.04
VCPKMT-205ENST00000569518 COX7B2Q8TF08 81 aa15.29■□□□□ 0.04
VCPKMT-205ENST00000569518 ENHOQ6UWT2 76 aa15.28■□□□□ 0.04
VCPKMT-205ENST00000569518 IGLV10-54A0A075B6I4 117 aa15.27■□□□□ 0.04
VCPKMT-205ENST00000569518 TIMM17BO60830 172 aa15.27■□□□□ 0.04
VCPKMT-205ENST00000569518 NHP2Q9NX24 153 aaKnown RBP15.27■□□□□ 0.04
VCPKMT-205ENST00000569518 ADAMTSL4-AS1Q5T5F5 129 aa15.27■□□□□ 0.03
VCPKMT-205ENST00000569518 A0A1B0GWB2 263 aa15.26■□□□□ 0.03
VCPKMT-205ENST00000569518 K7ERJ3 54 aa15.25■□□□□ 0.03
VCPKMT-205ENST00000569518 SPANXDQ9BXN6 97 aa15.25■□□□□ 0.03
VCPKMT-205ENST00000569518 SPANXCQ9NY87 97 aa15.25■□□□□ 0.03
VCPKMT-205ENST00000569518 NHLRC4P0CG21 123 aaPredicted RBP15.24■□□□□ 0.03
VCPKMT-205ENST00000569518 SMIM13P0DJ93 91 aa15.24■□□□□ 0.03
VCPKMT-205ENST00000569518 FOXI1Q12951 378 aa15.24■□□□□ 0.03
VCPKMT-205ENST00000569518 COX7A2LO14548 114 aa15.24■□□□□ 0.03
VCPKMT-205ENST00000569518 HERV-K104P63124 156 aa15.24■□□□□ 0.03
VCPKMT-205ENST00000569518 LINC01556Q5JQF7 62 aa15.24■□□□□ 0.03
VCPKMT-205ENST00000569518 TOMM7Q9P0U1 55 aa15.23■□□□□ 0.03
VCPKMT-205ENST00000569518 MEGF8Q7Z7M0 2845 aa15.22■□□□□ 0.03
VCPKMT-205ENST00000569518 TMEM238LA0A1B0GVL6 79 aa15.22■□□□□ 0.03
VCPKMT-205ENST00000569518 A6NJY4 79 aa15.22■□□□□ 0.03
VCPKMT-205ENST00000569518 MIAQ16674 131 aa15.22■□□□□ 0.03
VCPKMT-205ENST00000569518 IGLL5B9A064 214 aa15.22■□□□□ 0.03
VCPKMT-205ENST00000569518 LINC00588Q9Y4M8 146 aa15.21■□□□□ 0.03
VCPKMT-205ENST00000569518 TRAV8-4A0A0B4J246 113 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 CRPP02741 224 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 MUSTN1Q8IVN3 82 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 Q8IZM0 81 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 UBE2WQ96B02 151 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 GAGE12HA6NDE8 117 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 C9orf118A6NHY6 69 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 DNAH10OSP0CZ25 163 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 RAB37Q96AX2 223 aa15.2■□□□□ 0.02
VCPKMT-205ENST00000569518 CIRBPQ14011 172 aaKnown RBP15.18■□□□□ 0.02
VCPKMT-205ENST00000569518 PRKDCP78527 4128 aaKnown RBP15.18■□□□□ 0.02
VCPKMT-205ENST00000569518 RPL24P83731 157 aaKnown RBP15.17■□□□□ 0.02
VCPKMT-205ENST00000569518 KIAA0087Q14695 138 aa15.17■□□□□ 0.02
VCPKMT-205ENST00000569518 SFTA2Q6UW10 78 aa15.17■□□□□ 0.02
VCPKMT-205ENST00000569518 A4D1N5 150 aa15.16■□□□□ 0.02
VCPKMT-205ENST00000569518 CCL18P55774 89 aa15.16■□□□□ 0.02
VCPKMT-205ENST00000569518 PRSS2P07478 247 aa15.15■□□□□ 0.02
VCPKMT-205ENST00000569518 MALP21145 153 aa15.15■□□□□ 0.02
VCPKMT-205ENST00000569518 KRTAP26-1Q6PEX3 210 aa15.15■□□□□ 0.02
VCPKMT-205ENST00000569518 DAND5Q8N907 189 aa15.15■□□□□ 0.02
VCPKMT-205ENST00000569518 IFITM1P13164 125 aa15.15■□□□□ 0.02
VCPKMT-205ENST00000569518 C6orf226Q5I0X4 101 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms