RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 COL6A5A8TX70 2615 aa16.59■□□□□ 0.25
LINC00543-201ENST00000567234 IGLV4-3A0A075B6K6 122 aa16.59■□□□□ 0.25
LINC00543-201ENST00000567234 K7EQD1 137 aa16.59■□□□□ 0.25
LINC00543-201ENST00000567234 CHCHD7Q9BUK0 85 aa16.59■□□□□ 0.25
LINC00543-201ENST00000567234 TMEM126AQ9H061 195 aa16.59■□□□□ 0.25
LINC00543-201ENST00000567234 RPL36AP83881 106 aaKnown RBP16.58■□□□□ 0.24
LINC00543-201ENST00000567234 ZNRF2Q8NHG8 242 aa16.58■□□□□ 0.24
LINC00543-201ENST00000567234 RPL36ALQ969Q0 106 aaKnown RBP16.58■□□□□ 0.24
LINC00543-201ENST00000567234 TRRAPQ9Y4A5 3859 aa16.58■□□□□ 0.24
LINC00543-201ENST00000567234 IMUPQ9GZP8 106 aa16.57■□□□□ 0.24
LINC00543-201ENST00000567234 WIPF1O43516 503 aa16.56■□□□□ 0.24
LINC00543-201ENST00000567234 COX6CP09669 75 aa16.56■□□□□ 0.24
LINC00543-201ENST00000567234 TRBV7-7A0A0K0K1E9 115 aa16.56■□□□□ 0.24
LINC00543-201ENST00000567234 OPRPNQ99935 248 aaPredicted RBP16.56■□□□□ 0.24
LINC00543-201ENST00000567234 TRGV2A0A075B6R0 118 aa16.55■□□□□ 0.24
LINC00543-201ENST00000567234 SMIM9A6NGZ8 99 aa16.55■□□□□ 0.24
LINC00543-201ENST00000567234 DAZ4Q86SG3 579 aaKnown RBP16.55■□□□□ 0.24
LINC00543-201ENST00000567234 C3orf56Q8N813 242 aa16.55■□□□□ 0.24
LINC00543-201ENST00000567234 C15orf53Q8NAA6 179 aa16.55■□□□□ 0.24
LINC00543-201ENST00000567234 DAZ3Q9NR90 486 aaKnown RBP16.55■□□□□ 0.24
LINC00543-201ENST00000567234 ACYP1P07311 99 aa16.54■□□□□ 0.24
LINC00543-201ENST00000567234 KIR2DL5BQ8NHK3 375 aa16.54■□□□□ 0.24
LINC00543-201ENST00000567234 UBE2D4Q9Y2X8 147 aa16.54■□□□□ 0.24
LINC00543-201ENST00000567234 TRBV6-4A0A1B0GX49 114 aa16.53■□□□□ 0.24
LINC00543-201ENST00000567234 MUSTN1Q8IVN3 82 aa16.53■□□□□ 0.24
LINC00543-201ENST00000567234 FAM104AQ969W3 186 aa16.53■□□□□ 0.24
LINC00543-201ENST00000567234 SPANXCQ9NY87 97 aa16.53■□□□□ 0.24
LINC00543-201ENST00000567234 IGHV3-38A0A0C4DH36 116 aa16.52■□□□□ 0.24
LINC00543-201ENST00000567234 TIMM21Q9BVV7 248 aa16.52■□□□□ 0.24
LINC00543-201ENST00000567234 EIF4EBP3O60516 100 aaPredicted RBP16.52■□□□□ 0.23
LINC00543-201ENST00000567234 EMP1P54849 157 aa16.52■□□□□ 0.23
LINC00543-201ENST00000567234 CCDC179H3BU77 68 aa16.51■□□□□ 0.23
LINC00543-201ENST00000567234 Q1RN00 199 aa16.51■□□□□ 0.23
LINC00543-201ENST00000567234 C2orf82Q6UX34 121 aa16.5■□□□□ 0.23
LINC00543-201ENST00000567234 LINC00612Q8N6U2 182 aa16.5■□□□□ 0.23
LINC00543-201ENST00000567234 ZNF22P17026 224 aaPredicted RBP16.49■□□□□ 0.23
LINC00543-201ENST00000567234 APOC4P55056 127 aa16.49■□□□□ 0.23
LINC00543-201ENST00000567234 MRPS36P82909 103 aaKnown RBP16.49■□□□□ 0.23
LINC00543-201ENST00000567234 X6R8D5 127 aa16.49■□□□□ 0.23
LINC00543-201ENST00000567234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.48■□□□□ 0.23
LINC00543-201ENST00000567234 A0A0J9YXY3 114 aa16.48■□□□□ 0.23
LINC00543-201ENST00000567234 IGKV2-29A2NJV5 120 aaPredicted RBP16.48■□□□□ 0.23
LINC00543-201ENST00000567234 TIMM17BO60830 172 aa16.47■□□□□ 0.23
LINC00543-201ENST00000567234 TRGV4A0A0C4DH28 118 aa16.47■□□□□ 0.23
LINC00543-201ENST00000567234 TRIAP1O43715 76 aa16.47■□□□□ 0.23
LINC00543-201ENST00000567234 ATP5G1P05496 136 aa16.47■□□□□ 0.23
LINC00543-201ENST00000567234 SHISA2Q6UWI4 295 aa16.47■□□□□ 0.23
LINC00543-201ENST00000567234 ICOSQ9Y6W8 199 aa16.47■□□□□ 0.23
LINC00543-201ENST00000567234 TEX49A0A1B0GTD5 131 aa16.46■□□□□ 0.23
LINC00543-201ENST00000567234 FHL2Q14192 279 aa16.46■□□□□ 0.23
LINC00543-201ENST00000567234 CEMP1Q6PRD7 247 aaPredicted RBP16.46■□□□□ 0.23
LINC00543-201ENST00000567234 A0A0J9YXV3 536 aa16.45■□□□□ 0.22
LINC00543-201ENST00000567234 TMEM101Q96IK0 257 aa16.45■□□□□ 0.22
LINC00543-201ENST00000567234 CSDC2Q9Y534 153 aaKnown RBP16.45■□□□□ 0.22
LINC00543-201ENST00000567234 MDFIQ99750 246 aa16.45■□□□□ 0.22
LINC00543-201ENST00000567234 H7C423 109 aa16.44■□□□□ 0.22
LINC00543-201ENST00000567234 LST1O00453 97 aa16.44■□□□□ 0.22
LINC00543-201ENST00000567234 NTM-AS1Q6ZSK4 140 aa16.43■□□□□ 0.22
LINC00543-201ENST00000567234 LITAFQ99732 161 aa16.43■□□□□ 0.22
LINC00543-201ENST00000567234 TINCRA0A1B0GVN0 87 aa16.42■□□□□ 0.22
LINC00543-201ENST00000567234 HERV-K104P63124 156 aa16.42■□□□□ 0.22
LINC00543-201ENST00000567234 MEIG1Q5JSS6 88 aa16.42■□□□□ 0.22
LINC00543-201ENST00000567234 DGAT2L7PQ6IED9 249 aa16.42■□□□□ 0.22
LINC00543-201ENST00000567234 MIAQ16674 131 aa16.41■□□□□ 0.22
LINC00543-201ENST00000567234 LYRM9A8MSI8 78 aa16.4■□□□□ 0.22
LINC00543-201ENST00000567234 SMIM20Q8N5G0 67 aa16.4■□□□□ 0.22
LINC00543-201ENST00000567234 LINC00694P0DN24 101 aa16.39■□□□□ 0.21
LINC00543-201ENST00000567234 IGHV1-58A0A0C4DH39 117 aa16.38■□□□□ 0.21
LINC00543-201ENST00000567234 IGHV3-30-3P0DP02 117 aa16.38■□□□□ 0.21
LINC00543-201ENST00000567234 DEFB130BP0DP73 79 aa16.38■□□□□ 0.21
LINC00543-201ENST00000567234 DEFB130AP0DP74 79 aa16.38■□□□□ 0.21
LINC00543-201ENST00000567234 H7C2G1 150 aa16.38■□□□□ 0.21
LINC00543-201ENST00000567234 RNASE13Q5GAN3 156 aaKnown RBP16.38■□□□□ 0.21
LINC00543-201ENST00000567234 TMEM243Q9BU79 118 aa16.38■□□□□ 0.21
LINC00543-201ENST00000567234 PKD1L1Q8TDX9 2849 aa16.37■□□□□ 0.21
LINC00543-201ENST00000567234 LOC100131303A0A0U1RQF7 123 aa16.37■□□□□ 0.21
LINC00543-201ENST00000567234 DEFB135Q30KP9 77 aa16.37■□□□□ 0.21
LINC00543-201ENST00000567234 COPS9Q8WXC6 57 aa16.37■□□□□ 0.21
LINC00543-201ENST00000567234 TIRAPP58753 221 aa16.36■□□□□ 0.21
LINC00543-201ENST00000567234 FAM19A3Q7Z5A8 133 aa16.35■□□□□ 0.21
LINC00543-201ENST00000567234 PPDPFQ9H3Y8 114 aa16.35■□□□□ 0.21
LINC00543-201ENST00000567234 MIFP14174 115 aa16.34■□□□□ 0.21
LINC00543-201ENST00000567234 IGHV4-30-4P0DP06 118 aa16.33■□□□□ 0.21
LINC00543-201ENST00000567234 FAM222AQ5U5X8 452 aa16.33■□□□□ 0.21
LINC00543-201ENST00000567234 ANK2Q01484 3957 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 IGLV5-45A0A087WSX0 123 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 UBE2L6O14933 153 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 CXCL5P42830 114 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 OXLD1Q5BKU9 147 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 LINC00643Q86TS7 51 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 CMYA5Q8N3K9 4069 aa16.33■□□□□ 0.2
LINC00543-201ENST00000567234 CDC42SE2Q9NRR3 84 aa16.32■□□□□ 0.2
LINC00543-201ENST00000567234 NDUFA12Q9UI09 145 aa16.32■□□□□ 0.2
LINC00543-201ENST00000567234 SDIM1Q6ZPB5 146 aa16.31■□□□□ 0.2
LINC00543-201ENST00000567234 PRO0255Q9UI72 69 aa16.31■□□□□ 0.2
LINC00543-201ENST00000567234 TRBV6-8A0A0A6YYG3 113 aa16.31■□□□□ 0.2
LINC00543-201ENST00000567234 IGHV4-28A0A0C4DH34 117 aa16.31■□□□□ 0.2
LINC00543-201ENST00000567234 VSIG2Q96IQ7 327 aa16.31■□□□□ 0.2
LINC00543-201ENST00000567234 HERVK_113P63121 156 aa16.3■□□□□ 0.2
LINC00543-201ENST00000567234 Q8NAQ8 132 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 561.7 ms