RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KRTAP26-1Q6PEX3 210 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 ALKAL2Q6UX46 152 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 SDIM1Q6ZPB5 146 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 C5orf38Q86SI9 138 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 NIT1Q86X76 327 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 KCNRGQ8N5I3 272 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 C5orf17Q8NAS9 161 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 GATD1Q8NB37 220 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 OR2D3Q8NGH3 330 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 CIRBP-AS1Q8TBR5 109 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 MBD3L1Q8WWY6 194 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 SFRP2Q96HF1 295 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 KCNS1Q96KK3 526 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 C18orf15Q96N68 181 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 ODF3Q96PU9 254 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 TXNDC17Q9BRA2 123 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 LINC00467Q9BRT7 94 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 PRADC1Q9BSG0 188 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 UPK3BQ9BT76 320 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 CHAC1Q9BUX1 264 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 MAP1LC3BQ9GZQ8 125 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 MED9Q9NWA0 146 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 PHLDA3Q9Y5J5 127 aa0.63□□□□□ -2.31
SMG1-212ENST00000566328 TRBV7-3A0A075B6L6 115 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 A0A087WX48 190 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TRBV6-8A0A0A6YYG3 113 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TRAV8-3A0A0A6YYJ7 113 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TRAV13-1A0A0B4J241 112 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 PIGBOS1A0A0B4J2F0 54 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 A0A0D9SG52 128 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TRBV6-1A0A0K0K1D8 114 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 LOC389332A0A1B0GUA5 103 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TRBV6-4A0A1B0GX49 114 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 A0A1W2PNN7 141 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 KANTRA0A1W2PQU2 76 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 C19orf71A6NCJ1 209 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 HMSDA8MTL9 139 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 A8MWV9 139 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 H7C1H1 209 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 K7EQM0 130 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TCAPO15273 167 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 PFDN1O60925 122 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 SCO1O75880 301 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TSPAN13O95857 204 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 NCR2O95944 276 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 PTTG1O95997 202 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 IFNA1P01562 189 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 P01737 135 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 MBP02144 154 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 SRP19P09132 144 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 TLX1NBP0CAT3 122 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 SMIM17P0DL12 118 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 MT1HL1P0DM35 61 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TPT1P13693 172 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 RAB4AP20338 218 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 S100A7P31151 101 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 AKR1C3P42330 323 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 KRTAP12-1P59990 96 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 RAB4BP61018 213 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 UBE2D3P61077 147 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 UBE2G1P62253 170 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 UBE2D2P62837 147 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 RPL39P62891 51 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 REG3AQ06141 175 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 ZNF56Q15929 161 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 MAJINQ3KP22 176 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 C9orf116Q5BN46 136 aaPredicted RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 CENPWQ5EE01 88 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TTC32Q5I0X7 151 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 IBA57Q5T440 356 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 SPANXN1Q5VSR9 72 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 SAMD13Q5VXD3 122 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 RNASEKQ6P5S7 137 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 UNQ6190/PRO20217Q6UXQ8 127 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 LINC00299Q6ZSB3 139 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 PHF5AQ7RTV0 110 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 S100A7AQ86SG5 101 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 Q86TA4 180 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 AMN1Q8IY45 258 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 C9orf62Q8N4C0 152 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 FER1L6-AS1Q8NA97 138 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 NUP35Q8NFH5 326 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 HIST1H2BAQ96A08 127 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 FMC1Q96HJ9 113 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 C20orf144Q9BQM9 153 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 PSMG3Q9BT73 122 aaPredicted RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 TMEM70Q9BUB7 260 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 CHCHD7Q9BUK0 85 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 EIF5A2Q9GZV4 153 aaKnown RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 DPH3P1Q9H4G8 78 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 NIT2Q9NQR4 276 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 TMEM167BQ9NRX6 74 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 IL36BQ9NZH7 164 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 ZFP30Q9Y2G7 519 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 LENEPQ9Y5L5 61 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 URGCP-MRPS24S4R325 110 aa0.62□□□□□ -2.31
SMG1-212ENST00000566328 FLGP20930 4061 aaPredicted RBP0.62□□□□□ -2.31
SMG1-212ENST00000566328 USH2AO75445 5202 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 A0A096LNI7 61 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms