RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
CNEP1R1-206ENST00000565556 TRBV10-2A0A0K0K1G8 114 aa6.7□□□□□ -1.34
CNEP1R1-206ENST00000565556 SNCGO76070 127 aa6.7□□□□□ -1.34
CNEP1R1-206ENST00000565556 MRPS36P82909 103 aaKnown RBP6.7□□□□□ -1.34
CNEP1R1-206ENST00000565556 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
CNEP1R1-206ENST00000565556 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 K7EIL1 84 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 TRIAP1O43715 76 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 Q6ZTI0 123 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 UBE2WQ96B02 151 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 LITAFQ99732 161 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 SPANXA1Q9NS26 97 aa6.69□□□□□ -1.34
CNEP1R1-206ENST00000565556 TRAV8-4A0A0B4J246 113 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 TRAV4A0A0B4J268 109 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 IGHV1-58A0A0C4DH39 117 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 COX6CP09669 75 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 MIAQ16674 131 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 ICOSQ9Y6W8 199 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
CNEP1R1-206ENST00000565556 TRGV2A0A075B6R0 118 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 IGHV4-28A0A0C4DH34 117 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 H3BT86 120 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE7O76087 117 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE12FP0CL80 117 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE12GP0CL81 117 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE12IP0CL82 117 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 DEFB121Q5J5C9 76 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 Q6Q795 121 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 Q8NAQ8 132 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 NACAE9PAV3 2078 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 TIMM17BO60830 172 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 PRB2P02812 416 aaPredicted RBP6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE2BQ13066 116 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE2EQ4V326 116 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 LINC00612Q8N6U2 182 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 GAGE2DQ9UEU5 116 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 TNFRSF18Q9Y5U5 241 aa6.67□□□□□ -1.34
CNEP1R1-206ENST00000565556 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 PRSS2P07478 247 aa6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 MRPL23Q16540 153 aaKnown RBP6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 MGAM2Q2M2H8 2515 aa6.66□□□□□ -1.34
CNEP1R1-206ENST00000565556 TRAV8-3A0A0A6YYJ7 113 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 SPART-AS1P0CW21 52 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 IFITM1P13164 125 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 FAM222AQ5U5X8 452 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 NBEAL1Q6ZS30 2694 aa6.65□□□□□ -1.34
CNEP1R1-206ENST00000565556 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 DEFB130BP0DP73 79 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 DEFB130AP0DP74 79 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 GAGE5Q13069 117 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 GAGE6Q13070 117 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 DNAJC30Q96LL9 226 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 FAM240AA0A1B0GVK7 77 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 DEFB4AO15263 64 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 DAD1P61803 113 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 CHCHD7Q9BUK0 85 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 C11orf68Q9H3H3 251 aaKnown RBP6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 RETNQ9HD89 108 aa6.64□□□□□ -1.35
CNEP1R1-206ENST00000565556 TRGV4A0A0C4DH28 118 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 TRBV10-1A0A0K0K1A3 114 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 H7C423 109 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 LST1O00453 97 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 Q6ZSN1 163 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 C15orf53Q8NAA6 179 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 TM2D3Q9BRN9 247 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
CNEP1R1-206ENST00000565556 TRBV6-4A0A1B0GX49 114 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 K7EQD1 137 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 NDUFA1O15239 70 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 RNASE13Q5GAN3 156 aaKnown RBP6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 CEMP1Q6PRD7 247 aaPredicted RBP6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 MRAPQ8TCY5 172 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 NHLRC4P0CG21 123 aaPredicted RBP6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 TIRAPP58753 221 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 FHL2Q14192 279 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
CNEP1R1-206ENST00000565556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
CNEP1R1-206ENST00000565556 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
CNEP1R1-206ENST00000565556 ATP5G1P05496 136 aa6.61□□□□□ -1.35
CNEP1R1-206ENST00000565556 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
CNEP1R1-206ENST00000565556 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
CNEP1R1-206ENST00000565556 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
CNEP1R1-206ENST00000565556 NPC2P61916 151 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms