RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SOSTDC1Q6X4U4 206 aa11.02□□□□□ -0.64
GTF3C1-205ENST00000564747 CDC42SE2Q9NRR3 84 aa11.02□□□□□ -0.64
GTF3C1-205ENST00000564747 TRBV10-1A0A0K0K1A3 114 aa11.02□□□□□ -0.65
GTF3C1-205ENST00000564747 DNAJC9-AS1A6NH13 148 aa11.02□□□□□ -0.65
GTF3C1-205ENST00000564747 DAZ2Q13117 558 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-205ENST00000564747 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-205ENST00000564747 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-205ENST00000564747 CSDC2Q9Y534 153 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-205ENST00000564747 FAM19A3Q7Z5A8 133 aa11.01□□□□□ -0.65
GTF3C1-205ENST00000564747 LRRC75A-AS1Q8N1F1 130 aa11.01□□□□□ -0.65
GTF3C1-205ENST00000564747 DEFB121Q5J5C9 76 aa11.01□□□□□ -0.65
GTF3C1-205ENST00000564747 PRIMA1Q86XR5 153 aa11□□□□□ -0.65
GTF3C1-205ENST00000564747 F5H768 121 aa11□□□□□ -0.65
GTF3C1-205ENST00000564747 ESM1Q9NQ30 184 aa11□□□□□ -0.65
GTF3C1-205ENST00000564747 GIG44P09565 113 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 WFDC10AQ9H1F0 79 aa10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 FLNAP21333 2647 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 TMEM86BQ8N661 226 aa10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 LOC100131303A0A0U1RQF7 123 aa10.99□□□□□ -0.65
GTF3C1-205ENST00000564747 PLA2G2AP14555 144 aa10.97□□□□□ -0.65
GTF3C1-205ENST00000564747 WFDC11Q8NEX6 87 aa10.97□□□□□ -0.65
GTF3C1-205ENST00000564747 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.65
GTF3C1-205ENST00000564747 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.65
GTF3C1-205ENST00000564747 UBE2L6O14933 153 aa10.96□□□□□ -0.65
GTF3C1-205ENST00000564747 RPL35AP18077 110 aaKnown RBP10.96□□□□□ -0.66
GTF3C1-205ENST00000564747 TMEM243Q9BU79 118 aa10.96□□□□□ -0.66
GTF3C1-205ENST00000564747 TRBV7-7A0A0K0K1E9 115 aa10.95□□□□□ -0.66
GTF3C1-205ENST00000564747 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
GTF3C1-205ENST00000564747 COX7A2LO14548 114 aa10.95□□□□□ -0.66
GTF3C1-205ENST00000564747 HELZ2Q9BYK8 2649 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-205ENST00000564747 CHCHD5Q9BSY4 110 aa10.94□□□□□ -0.66
GTF3C1-205ENST00000564747 ACYP1P07311 99 aa10.94□□□□□ -0.66
GTF3C1-205ENST00000564747 ACANP16112 2415 aa10.93□□□□□ -0.66
GTF3C1-205ENST00000564747 TENM4Q6N022 2769 aa10.93□□□□□ -0.66
GTF3C1-205ENST00000564747 IGKV3OR2-268A0A0C4DH90 116 aa10.93□□□□□ -0.66
GTF3C1-205ENST00000564747 COPS9Q8WXC6 57 aa10.93□□□□□ -0.66
GTF3C1-205ENST00000564747 HERV-K104P63124 156 aa10.93□□□□□ -0.66
GTF3C1-205ENST00000564747 MTORP42345 2549 aa10.92□□□□□ -0.66
GTF3C1-205ENST00000564747 C16orf74Q96GX8 76 aa10.92□□□□□ -0.66
GTF3C1-205ENST00000564747 LINC01006Q8NI28 216 aa10.91□□□□□ -0.66
GTF3C1-205ENST00000564747 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
GTF3C1-205ENST00000564747 SMIM20Q8N5G0 67 aa10.91□□□□□ -0.66
GTF3C1-205ENST00000564747 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
GTF3C1-205ENST00000564747 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
GTF3C1-205ENST00000564747 IGLV4-60A0A075B6I1 120 aa10.9□□□□□ -0.66
GTF3C1-205ENST00000564747 TRBV6-4A0A1B0GX49 114 aa10.9□□□□□ -0.66
GTF3C1-205ENST00000564747 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.66
GTF3C1-205ENST00000564747 FAM236AA0A1B0GUQ0 79 aa10.89□□□□□ -0.67
GTF3C1-205ENST00000564747 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
GTF3C1-205ENST00000564747 FAM218AQ96MZ4 157 aa10.89□□□□□ -0.67
GTF3C1-205ENST00000564747 IMUPQ9GZP8 106 aa10.89□□□□□ -0.67
GTF3C1-205ENST00000564747 COX7B2Q8TF08 81 aa10.89□□□□□ -0.67
GTF3C1-205ENST00000564747 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
GTF3C1-205ENST00000564747 HIST2H2BCQ6DN03 193 aa10.88□□□□□ -0.67
GTF3C1-205ENST00000564747 OVOL2Q9BRP0 275 aa10.88□□□□□ -0.67
GTF3C1-205ENST00000564747 IGLV1-51P01701 117 aa10.88□□□□□ -0.67
GTF3C1-205ENST00000564747 TRACP01848 142 aa10.88□□□□□ -0.67
GTF3C1-205ENST00000564747 FHL2Q14192 279 aa10.87□□□□□ -0.67
GTF3C1-205ENST00000564747 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-205ENST00000564747 CMC4P56277 68 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-205ENST00000564747 SMCR5Q8TEV8 140 aa10.87□□□□□ -0.67
GTF3C1-205ENST00000564747 FAM110AQ9BQ89 295 aa10.87□□□□□ -0.67
GTF3C1-205ENST00000564747 TRBV6-8A0A0A6YYG3 113 aa10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 BAALC-AS2P0C853 105 aa10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 LINC00643Q86TS7 51 aa10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 ANK3Q12955 4377 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 NOTCH2Q04721 2471 aa10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 FN1P02751 2386 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
GTF3C1-205ENST00000564747 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
GTF3C1-205ENST00000564747 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
GTF3C1-205ENST00000564747 C22orf24Q9Y442 160 aa10.85□□□□□ -0.67
GTF3C1-205ENST00000564747 IGHV3OR16-9A0A0B4J2B5 98 aa10.85□□□□□ -0.67
GTF3C1-205ENST00000564747 LINC00158P58513 81 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 C3orf56Q8N813 242 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 TRAV13-2A0A0B4J235 113 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 C5orf38Q86SI9 138 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 Q9HAA7 133 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 NBEAL2Q6ZNJ1 2754 aa10.84□□□□□ -0.67
GTF3C1-205ENST00000564747 CRPP02741 224 aa10.83□□□□□ -0.68
GTF3C1-205ENST00000564747 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
GTF3C1-205ENST00000564747 HECTD1Q9ULT8 2610 aa10.83□□□□□ -0.68
GTF3C1-205ENST00000564747 PDZD2O15018 2839 aa10.83□□□□□ -0.68
GTF3C1-205ENST00000564747 DEFB130BP0DP73 79 aa10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 DEFB130AP0DP74 79 aa10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 RPL28P46779 137 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 KRTAP1-1Q07627 177 aa10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 PF4P02776 101 aa10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 TMEM126AQ9H061 195 aa10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 C16orf95Q9H693 158 aa10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 RNASE1P07998 156 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-205ENST00000564747 GCN1Q92616 2671 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-205ENST00000564747 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
GTF3C1-205ENST00000564747 PFN2P35080 140 aa10.81□□□□□ -0.68
GTF3C1-205ENST00000564747 CCL18P55774 89 aa10.81□□□□□ -0.68
GTF3C1-205ENST00000564747 FAM222AQ5U5X8 452 aa10.81□□□□□ -0.68
GTF3C1-205ENST00000564747 ITPR2Q14571 2701 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms