RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 LINC00467Q9BRT7 94 aa3.38□□□□□ -1.87
CAPN3-212ENST00000564503 DAZ3Q9NR90 486 aaKnown RBP3.38□□□□□ -1.87
CAPN3-212ENST00000564503 CDKN2A-AS1Q9UH64 79 aa3.38□□□□□ -1.87
CAPN3-212ENST00000564503 ITPR3Q14573 2671 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 OTOGLQ3ZCN5 2332 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 IGHV3-73A0A0B4J1V6 119 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 A0A1W2PPR1 153 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 J3KT08 172 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 IGHV3-53P01767 116 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 RBMY1A1P0DJD3 496 aaKnown RBP3.37□□□□□ -1.87
CAPN3-212ENST00000564503 RBMY1CP0DJD4 496 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 LINC00694P0DN24 101 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 IGHV4-38-2P0DP08 117 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 PSMB8P28062 276 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 HIST1H4AP62805 103 aaKnown RBP3.37□□□□□ -1.87
CAPN3-212ENST00000564503 BLCAPP62952 87 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 RBMY1FQ15415 496 aaKnown RBP3.37□□□□□ -1.87
CAPN3-212ENST00000564503 SPATA3Q8NHX4 192 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 DMXL2Q8TDJ6 3036 aa3.37□□□□□ -1.87
CAPN3-212ENST00000564503 SPTBN1Q01082 2364 aaKnown RBP3.37□□□□□ -1.87
CAPN3-212ENST00000564503 HECTD1Q9ULT8 2610 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 KNCNA6PVL3 124 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 CRPP02741 224 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 CRYGAP11844 174 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
CAPN3-212ENST00000564503 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
CAPN3-212ENST00000564503 COX6A2Q02221 97 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 ODF3L2Q3SX64 289 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 LINC00242Q5T6M2 205 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 Q6JHZ5 121 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 SOSTDC1Q6X4U4 206 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 C3orf56Q8N813 242 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 C2orf48Q96LS8 159 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 SPENQ96T58 3664 aaKnown RBP3.36□□□□□ -1.87
CAPN3-212ENST00000564503 CR1P17927 2039 aa3.36□□□□□ -1.87
CAPN3-212ENST00000564503 HRNRQ86YZ3 2850 aaPredicted RBP3.35□□□□□ -1.87
CAPN3-212ENST00000564503 LOC400499M0QZD8 3231 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 ACACAQ13085 2346 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 IGHV3-38A0A0C4DH36 116 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 SMIM1B2RUZ4 78 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 RPL18AQ02543 176 aaKnown RBP3.35□□□□□ -1.87
CAPN3-212ENST00000564503 OR13C6PQ8NH95 151 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 C10orf105Q8TEF2 133 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 ZNF625Q96I27 306 aaPredicted RBP3.35□□□□□ -1.87
CAPN3-212ENST00000564503 C22orf24Q9Y442 160 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 TEX15Q9BXT5 2789 aa3.35□□□□□ -1.87
CAPN3-212ENST00000564503 MYO9AB2RTY4 2548 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 SMG1Q96Q15 3661 aaKnown RBP3.34□□□□□ -1.87
CAPN3-212ENST00000564503 IGHV4-61A0A0C4DH41 118 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 RBMY1BA6NDE4 496 aaKnown RBP3.34□□□□□ -1.87
CAPN3-212ENST00000564503 RBMY1EA6NEQ0 496 aaKnown RBP3.34□□□□□ -1.87
CAPN3-212ENST00000564503 H0YGX0 51 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 DNAL4O96015 105 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 INSP01308 110 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 RBMY1DP0C7P1 496 aaKnown RBP3.34□□□□□ -1.87
CAPN3-212ENST00000564503 PLA2G2AP14555 144 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 HTN1P15515 57 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 NBL1P41271 181 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 SYNJ2BPP57105 145 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 DEFB131AP59861 70 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 TMEM258P61165 79 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 Q75L30 129 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 Q8N2B8 174 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.34□□□□□ -1.87
CAPN3-212ENST00000564503 C11orf72Q8NBR9 251 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
CAPN3-212ENST00000564503 KLK5Q9Y337 293 aaPredicted RBP3.34□□□□□ -1.87
CAPN3-212ENST00000564503 RP1L1Q8IWN7 2480 aaPredicted RBP3.34□□□□□ -1.88
CAPN3-212ENST00000564503 TENM4Q6N022 2769 aa3.34□□□□□ -1.88
CAPN3-212ENST00000564503 DCHS2Q6V1P9 2916 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 CFAP46Q8IYW2 2715 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 SMIM9A6NGZ8 99 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 F5H768 121 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 UBE2L6O14933 153 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 MSMBP08118 114 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 HOXD3P31249 432 aaPredicted RBP3.33□□□□□ -1.88
CAPN3-212ENST00000564503 RPL36AP83881 106 aaKnown RBP3.33□□□□□ -1.88
CAPN3-212ENST00000564503 S100A7L2Q5SY68 101 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 C18orf65Q6ZTR6 163 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 LINC00336Q6ZUF6 198 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 COX7B2Q8TF08 81 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 UBE2E2Q96LR5 201 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 OBSCN-AS1Q96MR7 158 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 CDC42SE2Q9NRR3 84 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 Q9UF83 564 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 ANKHD1Q8IWZ3 2542 aaKnown RBP3.33□□□□□ -1.88
CAPN3-212ENST00000564503 FBN3Q75N90 2809 aa3.33□□□□□ -1.88
CAPN3-212ENST00000564503 COL6A6A6NMZ7 2263 aa3.32□□□□□ -1.88
CAPN3-212ENST00000564503 SPTA1P02549 2419 aa3.32□□□□□ -1.88
CAPN3-212ENST00000564503 SPTAN1Q13813 2472 aaKnown RBP3.32□□□□□ -1.88
CAPN3-212ENST00000564503 CEP295Q9C0D2 2601 aa3.32□□□□□ -1.88
CAPN3-212ENST00000564503 LRBAP50851 2863 aa3.32□□□□□ -1.88
CAPN3-212ENST00000564503 LOC107984640A0A0U1RRK4 108 aa3.32□□□□□ -1.88
CAPN3-212ENST00000564503 hADV29S1A0JD25 119 aa3.32□□□□□ -1.88
CAPN3-212ENST00000564503 K7EQD1 137 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms