RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 LITAFQ99732 161 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 TINCRA0A1B0GVN0 87 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 LINC01006Q8NI28 216 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 PYGO1Q9Y3Y4 419 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
RNF40-204ENST00000563683 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
RNF40-204ENST00000563683 DEFB135Q30KP9 77 aa7.58□□□□□ -1.2
RNF40-204ENST00000563683 TRBV10-1A0A0K0K1A3 114 aa7.58□□□□□ -1.2
RNF40-204ENST00000563683 NDUFA7O95182 113 aa7.58□□□□□ -1.2
RNF40-204ENST00000563683 LINC00643Q86TS7 51 aa7.58□□□□□ -1.2
RNF40-204ENST00000563683 ITPR3Q14573 2671 aa7.58□□□□□ -1.2
RNF40-204ENST00000563683 TIMM17BO60830 172 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 UQCRQO14949 82 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 Q6ZSN1 163 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 RELNP78509 3460 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 LOC100131303A0A0U1RQF7 123 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 ADAMTSL4-AS1Q5T5F5 129 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 MIR7-3HGQ8N6C7 128 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
RNF40-204ENST00000563683 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 TRAV13-2A0A0B4J235 113 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 RS1O15537 224 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 RBMY1FQ15415 496 aaKnown RBP7.56□□□□□ -1.2
RNF40-204ENST00000563683 Q9UF83 564 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 MUC4Q99102 2169 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 APOC4P55056 127 aa7.56□□□□□ -1.2
RNF40-204ENST00000563683 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
RNF40-204ENST00000563683 SMR3AQ99954 134 aa7.55□□□□□ -1.2
RNF40-204ENST00000563683 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
RNF40-204ENST00000563683 CXCL5P42830 114 aa7.54□□□□□ -1.2
RNF40-204ENST00000563683 LINC00526Q96FQ7 95 aa7.54□□□□□ -1.2
RNF40-204ENST00000563683 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
RNF40-204ENST00000563683 COX7A2LO14548 114 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 IGSF10Q6WRI0 2623 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 INAFM1C9JVW0 142 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 C1orf158Q8N1D5 194 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 LAMTOR3Q9UHA4 124 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 INAFM2P0DMQ5 153 aa7.53□□□□□ -1.2
RNF40-204ENST00000563683 LINC00694P0DN24 101 aa7.52□□□□□ -1.2
RNF40-204ENST00000563683 DPH3Q96FX2 82 aa7.52□□□□□ -1.2
RNF40-204ENST00000563683 J3KT08 172 aa7.52□□□□□ -1.21
RNF40-204ENST00000563683 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
RNF40-204ENST00000563683 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.21
RNF40-204ENST00000563683 Q9HAA7 133 aa7.52□□□□□ -1.21
RNF40-204ENST00000563683 PLA2G2AP14555 144 aa7.52□□□□□ -1.21
RNF40-204ENST00000563683 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
RNF40-204ENST00000563683 NDUFA1O15239 70 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 TRACP01848 142 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 TIRAPP58753 221 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 FAM222AQ5U5X8 452 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 CHCHD7Q9BUK0 85 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 SPENQ96T58 3664 aaKnown RBP7.51□□□□□ -1.21
RNF40-204ENST00000563683 EDA2RQ9HAV5 297 aa7.51□□□□□ -1.21
RNF40-204ENST00000563683 A0A1B0GX51 115 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 OVOL2Q9BRP0 275 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 COX7CP15954 63 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 ITPR1Q14643 2758 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 ATOX1O00244 68 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 COX6A2Q02221 97 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 C5orf47Q569G3 176 aa7.5□□□□□ -1.21
RNF40-204ENST00000563683 CHD6Q8TD26 2715 aa7.49□□□□□ -1.21
RNF40-204ENST00000563683 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
RNF40-204ENST00000563683 CSDC2Q9Y534 153 aaKnown RBP7.49□□□□□ -1.21
RNF40-204ENST00000563683 TRBV6-4A0A1B0GX49 114 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 SPART-AS1P0CW21 52 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 LINC00269Q8N2A0 174 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 TEX15Q9BXT5 2789 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 LECT2O14960 151 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 KLK12Q9UKR0 248 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 F8P00451 2351 aa7.48□□□□□ -1.21
RNF40-204ENST00000563683 LY6G6DO95868 133 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 MRAPQ8TCY5 172 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 CDC42SE2Q9NRR3 84 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
RNF40-204ENST00000563683 SDIM1Q6ZPB5 146 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 FAM104AQ969W3 186 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 CRYGAP11844 174 aa7.47□□□□□ -1.21
RNF40-204ENST00000563683 SMG1Q96Q15 3661 aaKnown RBP7.46□□□□□ -1.21
RNF40-204ENST00000563683 ATRQ13535 2644 aa7.46□□□□□ -1.22
RNF40-204ENST00000563683 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.22
RNF40-204ENST00000563683 HELZ2Q9BYK8 2649 aaKnown RBP7.45□□□□□ -1.22
RNF40-204ENST00000563683 HILS1P60008 231 aa7.45□□□□□ -1.22
RNF40-204ENST00000563683 IGLV5-45A0A087WSX0 123 aa7.45□□□□□ -1.22
RNF40-204ENST00000563683 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
RNF40-204ENST00000563683 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
RNF40-204ENST00000563683 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
RNF40-204ENST00000563683 LOC107984640A0A0U1RRK4 108 aa7.44□□□□□ -1.22
RNF40-204ENST00000563683 SMIM9A6NGZ8 99 aa7.44□□□□□ -1.22
RNF40-204ENST00000563683 H0YGX0 51 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms