RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
SPSB3-202ENST00000563668 TAX1BP3O14907 124 aa11.66□□□□□ -0.54
SPSB3-202ENST00000563668 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
SPSB3-202ENST00000563668 UPK3BQ9BT76 320 aa11.65□□□□□ -0.54
SPSB3-202ENST00000563668 A0A0J9YXV3 536 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 GAGE12JA6NER3 117 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 MRPS36P82909 103 aaKnown RBP11.65□□□□□ -0.55
SPSB3-202ENST00000563668 GAGE1Q13065 139 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 GAGE4Q13068 117 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 GAGE5Q13069 117 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 GAGE13Q4V321 117 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 Q6ZVH6 145 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.55
SPSB3-202ENST00000563668 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
SPSB3-202ENST00000563668 TAL2Q16559 108 aa11.64□□□□□ -0.55
SPSB3-202ENST00000563668 TMEM223A0PJW6 202 aa11.63□□□□□ -0.55
SPSB3-202ENST00000563668 A6NDN8 102 aa11.63□□□□□ -0.55
SPSB3-202ENST00000563668 LYPD5Q6UWN5 251 aa11.63□□□□□ -0.55
SPSB3-202ENST00000563668 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
SPSB3-202ENST00000563668 Q6ZUT4 128 aa11.63□□□□□ -0.55
SPSB3-202ENST00000563668 GYPEP15421 78 aa11.62□□□□□ -0.55
SPSB3-202ENST00000563668 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
SPSB3-202ENST00000563668 TM2D2Q9BX73 214 aa11.62□□□□□ -0.55
SPSB3-202ENST00000563668 GTSF1LQ9H1H1 148 aa11.62□□□□□ -0.55
SPSB3-202ENST00000563668 KIAA1109Q2LD37 5005 aa11.61□□□□□ -0.55
SPSB3-202ENST00000563668 ZNF815PA8K554 130 aa11.61□□□□□ -0.55
SPSB3-202ENST00000563668 LINC00694P0DN24 101 aa11.61□□□□□ -0.55
SPSB3-202ENST00000563668 TNP2Q05952 138 aa11.61□□□□□ -0.55
SPSB3-202ENST00000563668 MRPL23Q16540 153 aaKnown RBP11.61□□□□□ -0.55
SPSB3-202ENST00000563668 C6orf223Q8N319 242 aa11.61□□□□□ -0.55
SPSB3-202ENST00000563668 LEPROTO15243 131 aa11.6□□□□□ -0.55
SPSB3-202ENST00000563668 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
SPSB3-202ENST00000563668 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
SPSB3-202ENST00000563668 TINCRA0A1B0GVN0 87 aa11.6□□□□□ -0.55
SPSB3-202ENST00000563668 GCSHP23434 173 aa11.6□□□□□ -0.55
SPSB3-202ENST00000563668 CEND1Q8N111 149 aa11.6□□□□□ -0.55
SPSB3-202ENST00000563668 CSDC2Q9Y534 153 aaKnown RBP11.6□□□□□ -0.55
SPSB3-202ENST00000563668 H3BRM9 83 aa11.59□□□□□ -0.55
SPSB3-202ENST00000563668 J3QQQ9 107 aa11.59□□□□□ -0.55
SPSB3-202ENST00000563668 FXYD2P54710 66 aa11.59□□□□□ -0.55
SPSB3-202ENST00000563668 HERC2O95714 4834 aa11.59□□□□□ -0.55
SPSB3-202ENST00000563668 UBE2D1P51668 147 aa11.58□□□□□ -0.56
SPSB3-202ENST00000563668 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
SPSB3-202ENST00000563668 PLEKHB2Q96CS7 222 aa11.58□□□□□ -0.56
SPSB3-202ENST00000563668 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
SPSB3-202ENST00000563668 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
SPSB3-202ENST00000563668 K7EP13 123 aa11.56□□□□□ -0.56
SPSB3-202ENST00000563668 LGALS3P17931 250 aaKnown RBP11.56□□□□□ -0.56
SPSB3-202ENST00000563668 WFDC10BQ8IUB3 73 aa11.56□□□□□ -0.56
SPSB3-202ENST00000563668 HIST1H4GQ99525 98 aa11.56□□□□□ -0.56
SPSB3-202ENST00000563668 H7C423 109 aa11.55□□□□□ -0.56
SPSB3-202ENST00000563668 TIRAPP58753 221 aa11.55□□□□□ -0.56
SPSB3-202ENST00000563668 SCGB1D4Q6XE38 83 aa11.55□□□□□ -0.56
SPSB3-202ENST00000563668 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
SPSB3-202ENST00000563668 FAM19A3Q7Z5A8 133 aa11.55□□□□□ -0.56
SPSB3-202ENST00000563668 OR5A1Q8NGJ0 315 aa11.55□□□□□ -0.56
SPSB3-202ENST00000563668 IGLV5-45A0A087WSX0 123 aa11.54□□□□□ -0.56
SPSB3-202ENST00000563668 C9orf118A6NHY6 69 aa11.54□□□□□ -0.56
SPSB3-202ENST00000563668 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
SPSB3-202ENST00000563668 CDC42SE2Q9NRR3 84 aa11.54□□□□□ -0.56
SPSB3-202ENST00000563668 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
SPSB3-202ENST00000563668 SPANXB1Q9NS25 103 aaPredicted RBP11.53□□□□□ -0.56
SPSB3-202ENST00000563668 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.56
SPSB3-202ENST00000563668 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
SPSB3-202ENST00000563668 UBE2L6O14933 153 aa11.52□□□□□ -0.57
SPSB3-202ENST00000563668 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
SPSB3-202ENST00000563668 UBE2V1Q13404 147 aa11.52□□□□□ -0.57
SPSB3-202ENST00000563668 VAMP3Q15836 100 aa11.52□□□□□ -0.57
SPSB3-202ENST00000563668 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.57
SPSB3-202ENST00000563668 IGHV3-64A0A075B6Q5 118 aa11.51□□□□□ -0.57
SPSB3-202ENST00000563668 TRBV6-8A0A0A6YYG3 113 aa11.51□□□□□ -0.57
SPSB3-202ENST00000563668 AMMECR1LQ6DCA0 310 aa11.51□□□□□ -0.57
SPSB3-202ENST00000563668 Q6ZRN7 208 aaPredicted RBP11.51□□□□□ -0.57
SPSB3-202ENST00000563668 LINC00242Q5T6M2 205 aa11.5□□□□□ -0.57
SPSB3-202ENST00000563668 TMEM101Q96IK0 257 aa11.5□□□□□ -0.57
SPSB3-202ENST00000563668 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
SPSB3-202ENST00000563668 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
SPSB3-202ENST00000563668 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
SPSB3-202ENST00000563668 HERVK_113P63121 156 aa11.5□□□□□ -0.57
SPSB3-202ENST00000563668 DNAH5Q8TE73 4624 aa11.49□□□□□ -0.57
SPSB3-202ENST00000563668 K7ERJ3 54 aa11.49□□□□□ -0.57
SPSB3-202ENST00000563668 CCL25O15444 150 aa11.49□□□□□ -0.57
SPSB3-202ENST00000563668 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
SPSB3-202ENST00000563668 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
SPSB3-202ENST00000563668 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
SPSB3-202ENST00000563668 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
SPSB3-202ENST00000563668 H3BUT2 72 aa11.48□□□□□ -0.57
SPSB3-202ENST00000563668 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
SPSB3-202ENST00000563668 DNAH10OSP0CZ25 163 aa11.48□□□□□ -0.57
SPSB3-202ENST00000563668 COX6A2Q02221 97 aa11.48□□□□□ -0.57
SPSB3-202ENST00000563668 GAGE6Q13070 117 aa11.48□□□□□ -0.57
SPSB3-202ENST00000563668 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
SPSB3-202ENST00000563668 SH2D6Q7Z4S9 175 aa11.46□□□□□ -0.57
SPSB3-202ENST00000563668 TRAV13-1A0A0B4J241 112 aa11.45□□□□□ -0.58
SPSB3-202ENST00000563668 A0A0J9YXY3 114 aa11.45□□□□□ -0.58
SPSB3-202ENST00000563668 IGHV3-30P01768 117 aa11.45□□□□□ -0.58
SPSB3-202ENST00000563668 IGHV3-30-5P0DP03 117 aa11.45□□□□□ -0.58
SPSB3-202ENST00000563668 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms