RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 SOCS3O14543 225 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 ROMO1P60602 79 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
CAPN3-211ENST00000562199 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 RNASE13Q5GAN3 156 aaKnown RBP3.74□□□□□ -1.81
CAPN3-211ENST00000562199 C9orf66Q5T8R8 295 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 Q8NDZ9 215 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 C7orf33Q8WU49 177 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 LIMD2Q9BT23 127 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 SMIM2Q9BVW6 85 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 NAV3Q8IVL0 2385 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 SDK1Q7Z5N4 2213 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 ZNF815PA8K554 130 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 H7C423 109 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 TRGV3P03979 118 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 PRB4P10163 310 aaPredicted RBP3.73□□□□□ -1.81
CAPN3-211ENST00000562199 MOBPQ13875 183 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 KLK9Q2XQG4 91 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 DEFB109BQ30KR1 87 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 Q6ZTC4 211 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 KLK9Q9UKQ9 250 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 TECTAO75443 2155 aa3.73□□□□□ -1.81
CAPN3-211ENST00000562199 IGLV4-3A0A075B6K6 122 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 A0A087WW49 117 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 TRBV30A0A0K0K1B3 111 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 ODF3BA8MYP8 253 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 PRAC2D3DTV9 90 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 K7ERS5 55 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 LY6HO94772 140 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 MSMBP08118 114 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 COX6CP09669 75 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 COX6B1P14854 86 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 KRTAP10-9P60411 292 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 NDPQ00604 133 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 SUMO4Q6EEV6 95 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 S4R3C0 116 aa3.72□□□□□ -1.81
CAPN3-211ENST00000562199 INTS1Q8N201 2190 aaKnown RBP3.71□□□□□ -1.82
CAPN3-211ENST00000562199 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 A8MU10 97 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 A8MWP4 228 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 M0R1W7 72 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 LECT2O14960 151 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 CTSGP08311 255 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 RPL28P46779 137 aaKnown RBP3.71□□□□□ -1.82
CAPN3-211ENST00000562199 C9orf47Q6ZRZ4 202 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 LENEPQ9Y5L5 61 aa3.71□□□□□ -1.82
CAPN3-211ENST00000562199 RANBP2P49792 3224 aaKnown RBP3.71□□□□□ -1.82
CAPN3-211ENST00000562199 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-49A0A0A0MS15 119 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 A6NED7 52 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 PPP1R17O96001 155 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-23P01764 117 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 CRPP02741 224 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 PRB3Q04118 309 aaPredicted RBP3.7□□□□□ -1.82
CAPN3-211ENST00000562199 C2orf66Q6UXQ4 117 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 CASC2Q6XLA1 102 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 LAMA1P25391 3075 aa3.7□□□□□ -1.82
CAPN3-211ENST00000562199 HEATR1Q9H583 2144 aaKnown RBP3.7□□□□□ -1.82
CAPN3-211ENST00000562199 VCANP13611 3396 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 A0A0J9YY99 117 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 CLPSL1A2RUU4 121 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 CFC1P0CG37 223 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 MINOS1Q5TGZ0 78 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 MINOS1-NBL1R4GNA1 71 aa3.69□□□□□ -1.82
CAPN3-211ENST00000562199 KNTC1P50748 2209 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 SPEGQ15772 3267 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 TRBV6-8A0A0A6YYG3 113 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 TRAV21A0A0B4J279 112 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 C11orf86A6NJI1 115 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-33P01772 117 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 PRR9Q5T870 116 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 Q8N9W7 124 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 DEFB124Q8NES8 71 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 CHCHD7Q9BUK0 85 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 CDC42SE2Q9NRR3 84 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 AHCTF1Q8WYP5 2266 aa3.68□□□□□ -1.82
CAPN3-211ENST00000562199 A0A087WVE0 104 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-66A0A0C4DH42 116 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 IGLV5-39A0A0G2JS06 123 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 TRBV7-4A0A0J9YYF1 115 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 LOC101927531A0A1B0GV80 90 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 CYSRT1A8MQ03 144 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 LYNX1G3V0Z9 82 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 PSCAO43653 123 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-30P01768 117 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 MGPP08493 103 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-30-5P0DP03 117 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 LYNX1P0DP58 116 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 C1orf64Q8NEQ6 169 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms