RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 COX7CP15954 63 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 CTLA4P16410 223 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 CCL1P22362 96 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 ZNF137PP52743 207 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 FOXA3P55318 350 aaPredicted RBP0.95□□□□□ -2.26
USP8-216ENST00000561206 PLGLB1Q02325 96 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 ATXN8Q156A1 80 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 KISS1Q15726 138 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 CST6Q15828 149 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 KRTAP25-1Q3LHN0 102 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 FBXL19-AS1Q494R0 122 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 CLLU1OSQ5K130 101 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 TMEM170BQ5T4T1 132 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 GDF5OSQ5U4N7 250 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 MIC13Q5XKP0 118 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 SCGB1D4Q6XE38 83 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 Q6ZQT7 251 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 ZNF818PQ6ZRF7 136 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 SBSPONQ8IVN8 264 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 TMEM86BQ8N661 226 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 TMEM75Q8N9X5 138 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 COPS9Q8WXC6 57 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 UBE2WQ96B02 151 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 IFI27L1Q96BM0 104 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 PLEKHB2Q96CS7 222 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 BORCS8Q96FH0 119 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 NXT2Q9NPJ8 142 aaKnown RBP0.95□□□□□ -2.26
USP8-216ENST00000561206 KLK5Q9Y337 293 aaPredicted RBP0.95□□□□□ -2.26
USP8-216ENST00000561206 DOCK4Q8N1I0 1966 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 PTPRDP23468 1912 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 MGAMO43451 1857 aa0.95□□□□□ -2.26
USP8-216ENST00000561206 APC2O95996 2303 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 KIAA1549Q9HCM3 1950 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 AHCTF1Q8WYP5 2266 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 ANAPC1Q9H1A4 1944 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 PLXNB3Q9ULL4 1909 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 MDC1Q14676 2089 aaKnown RBP0.94□□□□□ -2.26
USP8-216ENST00000561206 TRBV7-3A0A075B6L6 115 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 TRBV25-1A0A075B6N4 114 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 IGHV3-21A0A0B4J1V1 117 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 IGKV1-9A0A0C4DH69 117 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 TRBV10-2A0A0K0K1G8 114 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 A0A1B0GUT8 65 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 hADV29S1A0JD25 119 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 KNCNA6PVL3 124 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 H3BQ85 93 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 H3BT86 120 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 J3QQQ9 107 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 M0R135 149 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 TCL1BO95988 128 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 LTAP01374 205 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 IGKV1-5P01602 117 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 P0DMU3 169 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 FAM231AP0DMU4 169 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 FAM231CP0DMU5 169 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 PYYP10082 97 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 COX6A1P12074 109 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 DEFA4P12838 97 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 HLA-DMBP28068 263 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 KRTAP12-1P59990 96 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 UBE2D3P61077 147 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 NPC2P61916 151 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 UBE2D2P62837 147 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 BSPH1Q075Z2 132 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 PMAIP1Q13794 54 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 VMA21Q3ZAQ7 101 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 FKBP1CQ5VVH2 108 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 C22orf39Q6P5X5 142 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 C2orf82Q6UX34 121 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 MIR17HGQ75NE6 70 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 AAED1Q7RTV5 226 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 LINC00643Q86TS7 51 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 MYOZ3Q8TDC0 251 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 SPTSSAQ969W0 71 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 DPH3Q96FX2 82 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 ODF3Q96PU9 254 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 DSCR8Q96T75 97 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 TRGV9Q99603 122 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 NABP2Q9BQ15 211 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 RTL8AQ9BWD3 113 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 AICDAQ9GZX7 198 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 AGPAT4-IT1Q9H0P7 198 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 DYNLRB1Q9NP97 96 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 LAMTOR3Q9UHA4 124 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 AMMECR1Q9Y4X0 333 aaPredicted RBP0.94□□□□□ -2.26
USP8-216ENST00000561206 ICOSQ9Y6W8 199 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 CACNA1CQ13936 2221 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 PLXNA2O75051 1894 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 PLXNA4Q9HCM2 1894 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 DOCK3Q8IZD9 2030 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 TRPM6Q9BX84 2022 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 TRRAPQ9Y4A5 3859 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 PLXNB2O15031 1838 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 MED12LQ86YW9 2145 aa0.94□□□□□ -2.26
USP8-216ENST00000561206 DMBT1Q9UGM3 2413 aaPredicted RBP0.94□□□□□ -2.26
USP8-216ENST00000561206 CSMD3Q7Z407 3707 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 GOLGA4Q13439 2230 aaKnown RBP0.93□□□□□ -2.26
USP8-216ENST00000561206 ATG2BQ96BY7 2078 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 GREB1Q4ZG55 1949 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms