RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 KLK12Q9UKR0 248 aa4.81□□□□□ -1.64
TRAF3-206ENST00000558880 TMEM262E9PQX1 116 aa4.8□□□□□ -1.64
TRAF3-206ENST00000558880 ORMDL2Q53FV1 153 aa4.8□□□□□ -1.64
TRAF3-206ENST00000558880 RNASEKQ6P5S7 137 aaKnown RBP4.8□□□□□ -1.64
TRAF3-206ENST00000558880 LINC00336Q6ZUF6 198 aa4.8□□□□□ -1.64
TRAF3-206ENST00000558880 FA2HQ7L5A8 372 aa4.8□□□□□ -1.64
TRAF3-206ENST00000558880 LINC00269Q8N2A0 174 aa4.8□□□□□ -1.64
TRAF3-206ENST00000558880 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 C1orf196B1AJZ1 125 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 HBDP02042 147 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
TRAF3-206ENST00000558880 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
TRAF3-206ENST00000558880 WFDC2Q14508 124 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 CLPSL2Q6UWE3 100 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 SPATA12Q7Z6I5 190 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 BAGE3Q86Y29 109 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 ZNF664Q8N3J9 261 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 CYSLTR1Q9Y271 337 aa4.79□□□□□ -1.64
TRAF3-206ENST00000558880 A0A087WX48 190 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 K7EP13 123 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 NDUFA6P56556 154 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 RAB5BP61020 215 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 COX6A2Q02221 97 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 REG3AQ06141 175 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 ERASQ7Z444 233 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 HIST3H2BBQ8N257 126 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 UBE2WQ96B02 151 aa4.78□□□□□ -1.64
TRAF3-206ENST00000558880 IGLV4-69A0A075B6H9 119 aa4.77□□□□□ -1.65
TRAF3-206ENST00000558880 LRCOL1A6NCL2 159 aa4.77□□□□□ -1.65
TRAF3-206ENST00000558880 UBE2L6O14933 153 aa4.77□□□□□ -1.65
TRAF3-206ENST00000558880 ANGP03950 147 aaKnown RBP4.77□□□□□ -1.65
TRAF3-206ENST00000558880 UBE2D1P51668 147 aa4.77□□□□□ -1.65
TRAF3-206ENST00000558880 LINC00242Q5T6M2 205 aa4.77□□□□□ -1.65
TRAF3-206ENST00000558880 IGLV10-54A0A075B6I4 117 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 IGHV3OR16-9A0A0B4J2B5 98 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 HSBP1O75506 76 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 PKIAP61925 76 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 TTC32Q5I0X7 151 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 AMMECR1LQ6DCA0 310 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 C6orf223Q8N319 242 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 C10orf126Q8N4M7 172 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 TMEM141Q96I45 108 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 SCGB3A1Q96QR1 104 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 CST9LQ9H4G1 147 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 Q9HAA7 133 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 HERC1Q15751 4861 aa4.76□□□□□ -1.65
TRAF3-206ENST00000558880 SNRPEP62304 92 aaKnown RBP4.75□□□□□ -1.65
TRAF3-206ENST00000558880 MIAQ16674 131 aa4.75□□□□□ -1.65
TRAF3-206ENST00000558880 CHCHD10Q8WYQ3 142 aaPredicted RBP4.75□□□□□ -1.65
TRAF3-206ENST00000558880 TMEM18Q96B42 140 aa4.75□□□□□ -1.65
TRAF3-206ENST00000558880 PACRGQ96M98 296 aaPredicted RBP4.75□□□□□ -1.65
TRAF3-206ENST00000558880 HIST1H2BLQ99880 126 aa4.75□□□□□ -1.65
TRAF3-206ENST00000558880 FAT1Q14517 4588 aa4.75□□□□□ -1.65
TRAF3-206ENST00000558880 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 TRAV9-2A0A087WT02 112 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 TRAV8-3A0A0A6YYJ7 113 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 TRAV13-1A0A0B4J241 112 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 IGKV3OR2-268A0A0C4DH90 116 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 CCL25O15444 150 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 FABP4P15090 132 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 C1orf134Q5TEV5 83 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 IFI27L1Q96BM0 104 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 TMEM101Q96IK0 257 aa4.74□□□□□ -1.65
TRAF3-206ENST00000558880 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 TRAV12-1A0A0B4J245 112 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 TRAV8-4A0A0B4J246 113 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 LINC01549A6NIU2 74 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.73□□□□□ -1.65
TRAF3-206ENST00000558880 ATP5LO75964 103 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 LEPROTL1O95214 131 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 C3orf79P0CE67 100 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 IGLC3P0DOY3 106 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 G0S2P27469 103 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 XCL1P47992 114 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 PMVKQ15126 192 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 DGAT2L7PQ6IED9 249 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 CD164L2Q6UWJ8 174 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 TEX43Q6ZNM6 134 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 NFE4Q86UQ8 179 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 VCX2Q9H322 139 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 HSPG2P98160 4391 aa4.73□□□□□ -1.65
TRAF3-206ENST00000558880 UBR4Q5T4S7 5183 aa4.72□□□□□ -1.65
TRAF3-206ENST00000558880 A0A087WTM6 91 aa4.72□□□□□ -1.65
TRAF3-206ENST00000558880 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
TRAF3-206ENST00000558880 SYS1-DBNDD2H3BUS1 97 aa4.72□□□□□ -1.65
TRAF3-206ENST00000558880 ZNF22P17026 224 aaPredicted RBP4.72□□□□□ -1.65
TRAF3-206ENST00000558880 FUSP35637 526 aaKnown RBP eCLIP4.72□□□□□ -1.65
TRAF3-206ENST00000558880 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
TRAF3-206ENST00000558880 MRPL35Q9NZE8 188 aaKnown RBP4.72□□□□□ -1.65
TRAF3-206ENST00000558880 A0A087WZ39 114 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms