RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 Q9H8V8 135 aa7.41□□□□□ -1.22
TPM1-210ENST00000558264 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
TPM1-210ENST00000558264 SMIM1B2RUZ4 78 aa7.4□□□□□ -1.22
TPM1-210ENST00000558264 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.22
TPM1-210ENST00000558264 PRO1854Q9UHT4 67 aa7.4□□□□□ -1.22
TPM1-210ENST00000558264 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.23
TPM1-210ENST00000558264 VPS25Q9BRG1 176 aa7.4□□□□□ -1.23
TPM1-210ENST00000558264 IGHV4-28A0A0C4DH34 117 aa7.39□□□□□ -1.23
TPM1-210ENST00000558264 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
TPM1-210ENST00000558264 KIR2DL5BQ8NHK3 375 aa7.39□□□□□ -1.23
TPM1-210ENST00000558264 CELA1Q9UNI1 258 aa7.39□□□□□ -1.23
TPM1-210ENST00000558264 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
TPM1-210ENST00000558264 Q1RN00 199 aa7.39□□□□□ -1.23
TPM1-210ENST00000558264 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 SCGB1C2P0DMR2 95 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 HTN3P15516 51 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 K7ERU9 68 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 TCL1BO95988 128 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
TPM1-210ENST00000558264 FBN1P35555 2871 aaKnown RBP7.37□□□□□ -1.23
TPM1-210ENST00000558264 F5H768 121 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 IGHV3-33P01772 117 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 IGHV4-30-4P0DP06 118 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 MIAQ16674 131 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 LINC00612Q8N6U2 182 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 STAB1Q9NY15 2570 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 NDUFA1O15239 70 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 Q8N3U1 123 aa7.37□□□□□ -1.23
TPM1-210ENST00000558264 PAX4O43316 350 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 APOC4P55056 127 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 PRIMA1Q86XR5 153 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 PRO0461Q9UI25 63 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 ERG28Q9UKR5 140 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 C5orf38Q86SI9 138 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 PRO0255Q9UI72 69 aa7.36□□□□□ -1.23
TPM1-210ENST00000558264 F8W1H4 67 aa7.35□□□□□ -1.23
TPM1-210ENST00000558264 DAD1P61803 113 aa7.35□□□□□ -1.23
TPM1-210ENST00000558264 SPANXDQ9BXN6 97 aa7.35□□□□□ -1.23
TPM1-210ENST00000558264 C11orf68Q9H3H3 251 aaKnown RBP7.35□□□□□ -1.23
TPM1-210ENST00000558264 SPANXCQ9NY87 97 aa7.35□□□□□ -1.23
TPM1-210ENST00000558264 SMIM9A6NGZ8 99 aa7.35□□□□□ -1.23
TPM1-210ENST00000558264 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
TPM1-210ENST00000558264 A0A0B4J2C4 111 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 RETNQ9HD89 108 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 PKD1L1Q8TDX9 2849 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 TRAV26-1A0A087WT03 109 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.34□□□□□ -1.23
TPM1-210ENST00000558264 XCL1P47992 114 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 KRTAP24-1Q3LI83 254 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 FAM19A3Q7Z5A8 133 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 Q8NAQ8 132 aa7.34□□□□□ -1.23
TPM1-210ENST00000558264 G3V4G9 280 aa7.34□□□□□ -1.24
TPM1-210ENST00000558264 LYRM9A8MSI8 78 aa7.33□□□□□ -1.24
TPM1-210ENST00000558264 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
TPM1-210ENST00000558264 WFDC9Q8NEX5 89 aa7.33□□□□□ -1.24
TPM1-210ENST00000558264 MAST4O15021 2626 aa7.33□□□□□ -1.24
TPM1-210ENST00000558264 H7C423 109 aa7.33□□□□□ -1.24
TPM1-210ENST00000558264 TRIAP1O43715 76 aa7.33□□□□□ -1.24
TPM1-210ENST00000558264 KRTAP10-11P60412 298 aa7.32□□□□□ -1.24
TPM1-210ENST00000558264 CIRBPQ14011 172 aaKnown RBP7.32□□□□□ -1.24
TPM1-210ENST00000558264 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
TPM1-210ENST00000558264 IGLV10-54A0A075B6I4 117 aa7.32□□□□□ -1.24
TPM1-210ENST00000558264 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
TPM1-210ENST00000558264 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
TPM1-210ENST00000558264 RPL13AP40429 203 aaKnown RBP7.31□□□□□ -1.24
TPM1-210ENST00000558264 COX7B2Q8TF08 81 aa7.31□□□□□ -1.24
TPM1-210ENST00000558264 LYRM7Q5U5X0 104 aa7.31□□□□□ -1.24
TPM1-210ENST00000558264 TIMM17BO60830 172 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 C9JAW5 83 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 ATP5G1P05496 136 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 LINC00269Q8N2A0 174 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 CLEC2BQ92478 149 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 RNF183Q96D59 192 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 ICOSQ9Y6W8 199 aa7.3□□□□□ -1.24
TPM1-210ENST00000558264 CYSRT1A8MQ03 144 aa7.29□□□□□ -1.24
TPM1-210ENST00000558264 MIFP14174 115 aa7.29□□□□□ -1.24
TPM1-210ENST00000558264 TRBV20-1A0A075B6N2 111 aa7.29□□□□□ -1.24
TPM1-210ENST00000558264 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
TPM1-210ENST00000558264 PFN2P35080 140 aa7.29□□□□□ -1.24
TPM1-210ENST00000558264 C3orf56Q8N813 242 aa7.29□□□□□ -1.24
TPM1-210ENST00000558264 ANGP03950 147 aaKnown RBP7.28□□□□□ -1.24
TPM1-210ENST00000558264 MIR7-3HGQ8N6C7 128 aa7.28□□□□□ -1.24
TPM1-210ENST00000558264 ANK2Q01484 3957 aa7.28□□□□□ -1.24
TPM1-210ENST00000558264 IFITM1P13164 125 aa7.28□□□□□ -1.24
TPM1-210ENST00000558264 A0A087WZ39 114 aa7.27□□□□□ -1.25
TPM1-210ENST00000558264 LINC00158P58513 81 aa7.27□□□□□ -1.25
TPM1-210ENST00000558264 C2orf82Q6UX34 121 aa7.27□□□□□ -1.25
TPM1-210ENST00000558264 NOTCH1P46531 2555 aa7.27□□□□□ -1.25
TPM1-210ENST00000558264 SS18Q15532 418 aa7.27□□□□□ -1.25
TPM1-210ENST00000558264 TENM3Q9P273 2699 aa7.27□□□□□ -1.25
TPM1-210ENST00000558264 HERV-K104P63124 156 aa7.26□□□□□ -1.25
TPM1-210ENST00000558264 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
TPM1-210ENST00000558264 WIPF1O43516 503 aa7.26□□□□□ -1.25
TPM1-210ENST00000558264 SLC25A20O43772 301 aa7.26□□□□□ -1.25
TPM1-210ENST00000558264 PRB2P02812 416 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms