RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 MYO18AQ92614 2054 aaKnown RBP1.51□□□□□ -2.17
TRAV28-201ENST00000557548 XIRP2A4UGR9 3374 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 H3BRN7 92 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 IGHV3-33P01772 117 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 COX6CP09669 75 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 FREM3P0C091 2139 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 SNRPFP62306 86 aaKnown RBP1.5□□□□□ -2.17
TRAV28-201ENST00000557548 PMCHL1Q16048 86 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 TPRXLQ17RH7 258 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 DMAC1Q96GE9 116 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 TTTY12Q9BZ98 90 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 PRO1854Q9UHT4 67 aa1.5□□□□□ -2.17
TRAV28-201ENST00000557548 PI4KAP42356 2102 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 NINQ8N4C6 2090 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 A0A0C4DFX4 3053 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 A0A0G2JND7 137 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 F2Z2F3 143 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 H3BUT2 72 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 BCE1O60756 84 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 TFF1P04155 84 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 ACYP1P07311 99 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 UBE2D3P61077 147 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 UBE2D2P62837 147 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 NMSQ5H8A3 153 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 C10orf128Q5T292 105 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 HEPN1Q6WQI6 88 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 VMO1Q7Z5L0 202 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 IFI27L1Q96BM0 104 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 TTC28Q96AY4 2481 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 NUMA1Q14980 2115 aa1.49□□□□□ -2.17
TRAV28-201ENST00000557548 EXPH5Q8NEV8 1989 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 MYO15AQ9UKN7 3530 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 MUC6Q6W4X9 2439 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 BDP1A6H8Y1 2624 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 TSC2P49815 1807 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 TRBV7-3A0A075B6L6 115 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 H7BZZ5 65 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 J3QRE1 110 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 UBE2D1P51668 147 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 EDDM3BP56851 147 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 CNBPP62633 177 aaKnown RBP1.48□□□□□ -2.17
TRAV28-201ENST00000557548 KLKP1Q107X0 134 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 WFDC2Q14508 124 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 Q8N6K4 173 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 PATE1Q8WXA2 126 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 TXNDC17Q9BRA2 123 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 LIMD2Q9BT23 127 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 MED12LQ86YW9 2145 aa1.48□□□□□ -2.17
TRAV28-201ENST00000557548 ZFHX2Q9C0A1 2572 aaPredicted RBP1.48□□□□□ -2.17
TRAV28-201ENST00000557548 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 DMDP11532 3685 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 SPTBN4Q9H254 2564 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 TRBV6-8A0A0A6YYG3 113 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 A0A0J9YY99 117 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 NUPR2A6NF83 97 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 ELOF1P60002 83 aaKnown RBP1.47□□□□□ -2.17
TRAV28-201ENST00000557548 TMEM170BQ5T4T1 132 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 LINC00643Q86TS7 51 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 C18orf32Q8TCD1 76 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 SPACA4Q8TDM5 124 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 LINC01600Q96MT4 127 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 ODF3Q96PU9 254 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 CYSTM1Q9H1C7 97 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
TRAV28-201ENST00000557548 HIGD1BQ9P298 99 aa1.47□□□□□ -2.17
TRAV28-201ENST00000557548 COL5A1P20908 1838 aaPredicted RBP1.47□□□□□ -2.17
TRAV28-201ENST00000557548 DNAH14Q0VDD8 3507 aa1.46□□□□□ -2.17
TRAV28-201ENST00000557548 KMT2BQ9UMN6 2715 aaPredicted RBP1.46□□□□□ -2.17
TRAV28-201ENST00000557548 MPDZO75970 2070 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 VPS13AQ96RL7 3174 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 TRBV25-1A0A075B6N4 114 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 TEX49A0A1B0GTD5 131 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 LOC285095A0A1B0GVY8 99 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 HIGD1CA8MV81 97 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 CFAP126Q5VTH2 177 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 Q5VV11 94 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 DEFB123Q8N688 67 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 DYNLRB1Q9NP97 96 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 LENEPQ9Y5L5 61 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 CFAP54Q96N23 3096 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 ZGRF1Q86YA3 2104 aa1.46□□□□□ -2.18
TRAV28-201ENST00000557548 HEATR1Q9H583 2144 aaKnown RBP1.46□□□□□ -2.18
TRAV28-201ENST00000557548 DMXL1Q9Y485 3027 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 MAP1BP46821 2468 aaKnown RBP1.45□□□□□ -2.18
TRAV28-201ENST00000557548 ANKRD36A6QL64 1941 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 TRBV6-4A0A1B0GX49 114 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 JMJD7-PLA2G4BH0Y9G9 81 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 PPYP01298 95 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 IGHV3-30P01768 117 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 IGHV3-30-5P0DP03 117 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 EFNA4P52798 201 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 ZNF56Q15929 161 aa1.45□□□□□ -2.18
TRAV28-201ENST00000557548 FAM186AA6NE01 2351 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 ZDBF2Q9HCK1 2354 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 WDFY3Q8IZQ1 3526 aa1.44□□□□□ -2.18
TRAV28-201ENST00000557548 RP1P56715 2156 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms