RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PAX4O43316 350 aa10.97□□□□□ -0.65
TMEM55B-207ENST00000557041 HILS1P60008 231 aa10.97□□□□□ -0.65
TMEM55B-207ENST00000557041 AMELXQ99217 191 aa10.97□□□□□ -0.65
TMEM55B-207ENST00000557041 ATXN8Q156A1 80 aa10.96□□□□□ -0.65
TMEM55B-207ENST00000557041 LINC00242Q5T6M2 205 aa10.96□□□□□ -0.65
TMEM55B-207ENST00000557041 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
TMEM55B-207ENST00000557041 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.66
TMEM55B-207ENST00000557041 IGLV1-51P01701 117 aa10.96□□□□□ -0.66
TMEM55B-207ENST00000557041 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
TMEM55B-207ENST00000557041 FOXI1Q12951 378 aa10.95□□□□□ -0.66
TMEM55B-207ENST00000557041 TRIAP1O43715 76 aa10.95□□□□□ -0.66
TMEM55B-207ENST00000557041 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
TMEM55B-207ENST00000557041 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
TMEM55B-207ENST00000557041 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
TMEM55B-207ENST00000557041 FAM222AQ5U5X8 452 aa10.94□□□□□ -0.66
TMEM55B-207ENST00000557041 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 FHL3Q13643 280 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 ICOSQ9Y6W8 199 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 IGLV4-60A0A075B6I1 120 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 DAD1P61803 113 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 MIAQ16674 131 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 ATP6V0E2Q8NHE4 81 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 PPDPFLQ8WWR9 84 aa10.93□□□□□ -0.66
TMEM55B-207ENST00000557041 UBE2D3P61077 147 aa10.92□□□□□ -0.66
TMEM55B-207ENST00000557041 UBE2D2P62837 147 aa10.92□□□□□ -0.66
TMEM55B-207ENST00000557041 MALP21145 153 aa10.92□□□□□ -0.66
TMEM55B-207ENST00000557041 LINC01620Q4KN68 170 aa10.92□□□□□ -0.66
TMEM55B-207ENST00000557041 TEN1Q86WV5 123 aa10.91□□□□□ -0.66
TMEM55B-207ENST00000557041 MIR7-3HGQ8N6C7 128 aa10.91□□□□□ -0.66
TMEM55B-207ENST00000557041 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
TMEM55B-207ENST00000557041 CDC42SE2Q9NRR3 84 aa10.91□□□□□ -0.66
TMEM55B-207ENST00000557041 TEX49A0A1B0GTD5 131 aa10.9□□□□□ -0.66
TMEM55B-207ENST00000557041 ZFAND6Q6FIF0 208 aa10.9□□□□□ -0.66
TMEM55B-207ENST00000557041 SMCPP49901 116 aaPredicted RBP10.89□□□□□ -0.67
TMEM55B-207ENST00000557041 CKS1BP61024 79 aa10.89□□□□□ -0.67
TMEM55B-207ENST00000557041 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
TMEM55B-207ENST00000557041 CRPP02741 224 aa10.89□□□□□ -0.67
TMEM55B-207ENST00000557041 KRTAP1-1Q07627 177 aa10.89□□□□□ -0.67
TMEM55B-207ENST00000557041 TRBV6-8A0A0A6YYG3 113 aa10.88□□□□□ -0.67
TMEM55B-207ENST00000557041 GIG44P09565 113 aaPredicted RBP10.88□□□□□ -0.67
TMEM55B-207ENST00000557041 LINC00308Q8TCZ7 52 aa10.88□□□□□ -0.67
TMEM55B-207ENST00000557041 LINC00526Q96FQ7 95 aa10.88□□□□□ -0.67
TMEM55B-207ENST00000557041 SMIM1B2RUZ4 78 aa10.88□□□□□ -0.67
TMEM55B-207ENST00000557041 DNAL4O96015 105 aa10.88□□□□□ -0.67
TMEM55B-207ENST00000557041 TRAV26-1A0A087WT03 109 aa10.87□□□□□ -0.67
TMEM55B-207ENST00000557041 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
TMEM55B-207ENST00000557041 SS18Q15532 418 aa10.87□□□□□ -0.67
TMEM55B-207ENST00000557041 COX7B2Q8TF08 81 aa10.87□□□□□ -0.67
TMEM55B-207ENST00000557041 CFAP161Q6P656 301 aa10.86□□□□□ -0.67
TMEM55B-207ENST00000557041 PDZD2O15018 2839 aa10.86□□□□□ -0.67
TMEM55B-207ENST00000557041 TIRAPP58753 221 aa10.86□□□□□ -0.67
TMEM55B-207ENST00000557041 SND1-IT1Q9HBX3 110 aa10.86□□□□□ -0.67
TMEM55B-207ENST00000557041 TRAV8-4A0A0B4J246 113 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 SNCGO76070 127 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 FHL2Q14192 279 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 LINC00269Q8N2A0 174 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 FAM104AQ969W3 186 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 Q9HAA7 133 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 TRBV6-4A0A1B0GX49 114 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 MT-ATP8P03928 68 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 PRO0461Q9UI25 63 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 NDUFA1O15239 70 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 FAM110AQ9BQ89 295 aa10.85□□□□□ -0.67
TMEM55B-207ENST00000557041 CRYBA4P53673 196 aa10.84□□□□□ -0.67
TMEM55B-207ENST00000557041 KRTAP10-3P60369 221 aa10.84□□□□□ -0.67
TMEM55B-207ENST00000557041 C9orf66Q5T8R8 295 aa10.84□□□□□ -0.67
TMEM55B-207ENST00000557041 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
TMEM55B-207ENST00000557041 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
TMEM55B-207ENST00000557041 A8MTW9 85 aa10.83□□□□□ -0.68
TMEM55B-207ENST00000557041 Q8N3U1 123 aa10.83□□□□□ -0.68
TMEM55B-207ENST00000557041 OXLD1Q5BKU9 147 aa10.83□□□□□ -0.68
TMEM55B-207ENST00000557041 ATP5G1P05496 136 aa10.82□□□□□ -0.68
TMEM55B-207ENST00000557041 C16orf95Q9H693 158 aa10.82□□□□□ -0.68
TMEM55B-207ENST00000557041 IFITM1P13164 125 aa10.82□□□□□ -0.68
TMEM55B-207ENST00000557041 FBN1P35555 2871 aaKnown RBP10.81□□□□□ -0.68
TMEM55B-207ENST00000557041 IGHV4-28A0A0C4DH34 117 aa10.8□□□□□ -0.68
TMEM55B-207ENST00000557041 APOC4P55056 127 aa10.8□□□□□ -0.68
TMEM55B-207ENST00000557041 TTC32Q5I0X7 151 aa10.8□□□□□ -0.68
TMEM55B-207ENST00000557041 LITAFQ99732 161 aa10.8□□□□□ -0.68
TMEM55B-207ENST00000557041 C19orf73Q9NVV2 129 aa10.8□□□□□ -0.68
TMEM55B-207ENST00000557041 KLK12Q9UKR0 248 aa10.8□□□□□ -0.68
TMEM55B-207ENST00000557041 SPANXDQ9BXN6 97 aa10.79□□□□□ -0.68
TMEM55B-207ENST00000557041 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
TMEM55B-207ENST00000557041 TRBV10-2A0A0K0K1G8 114 aa10.78□□□□□ -0.68
TMEM55B-207ENST00000557041 SOSTDC1Q6X4U4 206 aa10.78□□□□□ -0.68
TMEM55B-207ENST00000557041 C3orf56Q8N813 242 aa10.78□□□□□ -0.68
TMEM55B-207ENST00000557041 PLAC8L1A1L4L8 177 aa10.78□□□□□ -0.68
TMEM55B-207ENST00000557041 XGP55808 180 aa10.78□□□□□ -0.68
TMEM55B-207ENST00000557041 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.68
TMEM55B-207ENST00000557041 LINC00959A0A1B0GUT2 108 aa10.77□□□□□ -0.68
TMEM55B-207ENST00000557041 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.68
TMEM55B-207ENST00000557041 BAALC-AS2P0C853 105 aa10.77□□□□□ -0.69
TMEM55B-207ENST00000557041 HERV-K104P63124 156 aa10.77□□□□□ -0.69
TMEM55B-207ENST00000557041 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
TMEM55B-207ENST00000557041 GAGE2EQ4V326 116 aa10.77□□□□□ -0.69
TMEM55B-207ENST00000557041 C9orf116Q5BN46 136 aaPredicted RBP10.77□□□□□ -0.69
TMEM55B-207ENST00000557041 RETNQ9HD89 108 aa10.77□□□□□ -0.69
TMEM55B-207ENST00000557041 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 235.2 ms