RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SCGB1D4Q6XE38 83 aa12.86□□□□□ -0.35
SDR39U1-220ENST00000556548 J3QQQ9 107 aa12.85□□□□□ -0.35
SDR39U1-220ENST00000556548 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
SDR39U1-220ENST00000556548 RETNQ9HD89 108 aa12.85□□□□□ -0.35
SDR39U1-220ENST00000556548 A0A0J9YY99 117 aa12.84□□□□□ -0.35
SDR39U1-220ENST00000556548 DAD1P61803 113 aa12.84□□□□□ -0.35
SDR39U1-220ENST00000556548 TIMM21Q9BVV7 248 aa12.84□□□□□ -0.35
SDR39U1-220ENST00000556548 TRAV8-3A0A0A6YYJ7 113 aa12.84□□□□□ -0.35
SDR39U1-220ENST00000556548 MIFP14174 115 aa12.84□□□□□ -0.35
SDR39U1-220ENST00000556548 UBE2D1P51668 147 aa12.84□□□□□ -0.35
SDR39U1-220ENST00000556548 TRAV13-1A0A0B4J241 112 aa12.83□□□□□ -0.36
SDR39U1-220ENST00000556548 LGALS3P17931 250 aaKnown RBP12.83□□□□□ -0.36
SDR39U1-220ENST00000556548 PRO0255Q9UI72 69 aa12.83□□□□□ -0.36
SDR39U1-220ENST00000556548 TINCRA0A1B0GVN0 87 aa12.83□□□□□ -0.36
SDR39U1-220ENST00000556548 B5MCH6 92 aa12.83□□□□□ -0.36
SDR39U1-220ENST00000556548 HERV-K104P63124 156 aa12.83□□□□□ -0.36
SDR39U1-220ENST00000556548 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 COX6A2Q02221 97 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 LEPROTO15243 131 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 PAX4O43316 350 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 HTN3P15516 51 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 EGFEM1PQ0D2K5 195 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 CHCHD5Q9BSY4 110 aa12.82□□□□□ -0.36
SDR39U1-220ENST00000556548 A8MZ25 164 aa12.81□□□□□ -0.36
SDR39U1-220ENST00000556548 CDC42SE2Q9NRR3 84 aa12.81□□□□□ -0.36
SDR39U1-220ENST00000556548 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
SDR39U1-220ENST00000556548 CDKN2A-AS1Q9UH64 79 aa12.8□□□□□ -0.36
SDR39U1-220ENST00000556548 TMEM101Q96IK0 257 aa12.8□□□□□ -0.36
SDR39U1-220ENST00000556548 NOTCH1P46531 2555 aa12.79□□□□□ -0.36
SDR39U1-220ENST00000556548 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
SDR39U1-220ENST00000556548 IGHV3-30-3P0DP02 117 aa12.79□□□□□ -0.36
SDR39U1-220ENST00000556548 CSDC2Q9Y534 153 aaKnown RBP12.79□□□□□ -0.36
SDR39U1-220ENST00000556548 SPART-AS1P0CW21 52 aa12.79□□□□□ -0.36
SDR39U1-220ENST00000556548 F5H768 121 aa12.78□□□□□ -0.36
SDR39U1-220ENST00000556548 SMCPP49901 116 aaPredicted RBP12.78□□□□□ -0.36
SDR39U1-220ENST00000556548 LINC00242Q5T6M2 205 aa12.78□□□□□ -0.36
SDR39U1-220ENST00000556548 VSIG2Q96IQ7 327 aa12.78□□□□□ -0.36
SDR39U1-220ENST00000556548 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
SDR39U1-220ENST00000556548 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■□□□ 12
SDR39U1-220ENST00000556548 PRB2P02812 416 aaPredicted RBP12.77□□□□□ -0.36
SDR39U1-220ENST00000556548 PPDPFLQ8WWR9 84 aa12.77□□□□□ -0.36
SDR39U1-220ENST00000556548 ATP5G1P05496 136 aa12.77□□□□□ -0.37
SDR39U1-220ENST00000556548 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
SDR39U1-220ENST00000556548 DNAH3Q8TD57 4116 aa12.75□□□□□ -0.37
SDR39U1-220ENST00000556548 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
SDR39U1-220ENST00000556548 TIRAPP58753 221 aa12.74□□□□□ -0.37
SDR39U1-220ENST00000556548 H7C423 109 aa12.74□□□□□ -0.37
SDR39U1-220ENST00000556548 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
SDR39U1-220ENST00000556548 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
SDR39U1-220ENST00000556548 HERVK_113P63121 156 aa12.73□□□□□ -0.37
SDR39U1-220ENST00000556548 TEN1Q86WV5 123 aa12.73□□□□□ -0.37
SDR39U1-220ENST00000556548 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
SDR39U1-220ENST00000556548 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
SDR39U1-220ENST00000556548 IGLV5-45A0A087WSX0 123 aa12.72□□□□□ -0.37
SDR39U1-220ENST00000556548 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.37
SDR39U1-220ENST00000556548 NBEAL1Q6ZS30 2694 aa12.71□□□□□ -0.37
SDR39U1-220ENST00000556548 TENM3Q9P273 2699 aa12.7□□□□□ -0.38
SDR39U1-220ENST00000556548 A0A0J9YXY3 114 aa12.7□□□□□ -0.38
SDR39U1-220ENST00000556548 PSMB2P49721 201 aa12.7□□□□□ -0.38
SDR39U1-220ENST00000556548 CLPSL2Q6UWE3 100 aa12.68□□□□□ -0.38
SDR39U1-220ENST00000556548 FAM19A3Q7Z5A8 133 aa12.68□□□□□ -0.38
SDR39U1-220ENST00000556548 IGHV3-30P01768 117 aa12.68□□□□□ -0.38
SDR39U1-220ENST00000556548 IGHV3-30-5P0DP03 117 aa12.68□□□□□ -0.38
SDR39U1-220ENST00000556548 NDUFV3P56181 108 aaKnown RBP12.68□□□□□ -0.38
SDR39U1-220ENST00000556548 Q8N3U1 123 aa12.68□□□□□ -0.38
SDR39U1-220ENST00000556548 LYRM7Q5U5X0 104 aa12.67□□□□□ -0.38
SDR39U1-220ENST00000556548 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
SDR39U1-220ENST00000556548 GAGE2BQ13066 116 aa12.67□□□□□ -0.38
SDR39U1-220ENST00000556548 GAGE2EQ4V326 116 aa12.67□□□□□ -0.38
SDR39U1-220ENST00000556548 GAGE2DQ9UEU5 116 aa12.67□□□□□ -0.38
SDR39U1-220ENST00000556548 LOC107984156A0A0G2JMH3 177 aa12.66□□□□□ -0.38
SDR39U1-220ENST00000556548 ARL17AQ8IVW1 177 aa12.66□□□□□ -0.38
SDR39U1-220ENST00000556548 CCDC179H3BU77 68 aa12.65□□□□□ -0.38
SDR39U1-220ENST00000556548 ZNF625Q96I27 306 aaPredicted RBP12.65□□□□□ -0.38
SDR39U1-220ENST00000556548 A0A0J9YWU9 116 aa12.65□□□□□ -0.39
SDR39U1-220ENST00000556548 Q6ZTC4 211 aa12.65□□□□□ -0.39
SDR39U1-220ENST00000556548 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
SDR39U1-220ENST00000556548 MRPL23Q16540 153 aaKnown RBP12.64□□□□□ -0.39
SDR39U1-220ENST00000556548 TTC32Q5I0X7 151 aa12.64□□□□□ -0.39
SDR39U1-220ENST00000556548 ADAMTSL4-AS1Q5T5F5 129 aa12.64□□□□□ -0.39
SDR39U1-220ENST00000556548 IFITM1P13164 125 aa12.63□□□□□ -0.39
SDR39U1-220ENST00000556548 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
SDR39U1-220ENST00000556548 NPC2P61916 151 aa12.63□□□□□ -0.39
SDR39U1-220ENST00000556548 MUSTN1Q8IVN3 82 aa12.63□□□□□ -0.39
SDR39U1-220ENST00000556548 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
SDR39U1-220ENST00000556548 MDFIQ99750 246 aa12.63□□□□□ -0.39
SDR39U1-220ENST00000556548 LINC00959A0A1B0GUT2 108 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 SNCGO76070 127 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 PRSS2P07478 247 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 LITAFQ99732 161 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 Q9H8V8 135 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 MGAM2Q2M2H8 2515 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 TRBV20-1A0A075B6N2 111 aa12.62□□□□□ -0.39
SDR39U1-220ENST00000556548 A0A0U1RRA0 63 aa12.61□□□□□ -0.39
SDR39U1-220ENST00000556548 A0A1B0GUV1 79 aa12.61□□□□□ -0.39
SDR39U1-220ENST00000556548 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
SDR39U1-220ENST00000556548 DAND5Q8N907 189 aa12.61□□□□□ -0.39
SDR39U1-220ENST00000556548 XCL1P47992 114 aa12.61□□□□□ -0.39
SDR39U1-220ENST00000556548 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms