RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LINC00694P0DN24 101 aa10.87□□□□□ -0.67
ARHGEF40-207ENST00000556399 H3BQ85 93 aa10.87□□□□□ -0.67
ARHGEF40-207ENST00000556399 IGKV2D-24A0A075B6R9 120 aa10.87□□□□□ -0.67
ARHGEF40-207ENST00000556399 COX7CP15954 63 aa10.87□□□□□ -0.67
ARHGEF40-207ENST00000556399 ENHOQ6UWT2 76 aa10.87□□□□□ -0.67
ARHGEF40-207ENST00000556399 C20orf197Q8N268 126 aa10.86□□□□□ -0.67
ARHGEF40-207ENST00000556399 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF40-207ENST00000556399 REG3AQ06141 175 aa10.86□□□□□ -0.67
ARHGEF40-207ENST00000556399 USP9XQ93008 2570 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF40-207ENST00000556399 CCL18P55774 89 aa10.86□□□□□ -0.67
ARHGEF40-207ENST00000556399 USP17L23D6RBM5 183 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 ATP5EP2Q5VTU8 51 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 SERP2Q8N6R1 65 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 USP9YO00507 2555 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 C6orf99Q4VX62 202 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 PDE6GP18545 87 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 NREPQ16612 68 aa10.84□□□□□ -0.67
ARHGEF40-207ENST00000556399 ODF3L2Q3SX64 289 aa10.83□□□□□ -0.68
ARHGEF40-207ENST00000556399 COL27A1Q8IZC6 1860 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF40-207ENST00000556399 WFDC11Q8NEX6 87 aa10.83□□□□□ -0.68
ARHGEF40-207ENST00000556399 LINC00959A0A1B0GUT2 108 aa10.83□□□□□ -0.68
ARHGEF40-207ENST00000556399 RPL28P46779 137 aaKnown RBP10.82□□□□□ -0.68
ARHGEF40-207ENST00000556399 SBSPONQ8IVN8 264 aa10.82□□□□□ -0.68
ARHGEF40-207ENST00000556399 FUSP35637 526 aaKnown RBP eCLIP10.81□□□□□ -0.68
ARHGEF40-207ENST00000556399 TLN2Q9Y4G6 2542 aa10.81□□□□□ -0.68
ARHGEF40-207ENST00000556399 COX7BP24311 80 aa10.81□□□□□ -0.68
ARHGEF40-207ENST00000556399 CDH23Q9H251 3354 aa10.81□□□□□ -0.68
ARHGEF40-207ENST00000556399 IGHV4-28A0A0C4DH34 117 aa10.81□□□□□ -0.68
ARHGEF40-207ENST00000556399 CFAP54Q96N23 3096 aa10.8□□□□□ -0.68
ARHGEF40-207ENST00000556399 BEAN1Q3B7T3 259 aa10.8□□□□□ -0.68
ARHGEF40-207ENST00000556399 LRRC75A-AS1Q8N1F1 130 aa10.8□□□□□ -0.68
ARHGEF40-207ENST00000556399 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
ARHGEF40-207ENST00000556399 A0A087WYN8 130 aa10.79□□□□□ -0.68
ARHGEF40-207ENST00000556399 Q6JHZ5 121 aa10.79□□□□□ -0.68
ARHGEF40-207ENST00000556399 BRK1Q8WUW1 75 aa10.79□□□□□ -0.68
ARHGEF40-207ENST00000556399 C1orf158Q8N1D5 194 aa10.79□□□□□ -0.68
ARHGEF40-207ENST00000556399 V9GYY9 64 aa10.79□□□□□ -0.68
ARHGEF40-207ENST00000556399 BBC3Q96PG8 261 aaPredicted RBP10.78□□□□□ -0.68
ARHGEF40-207ENST00000556399 SETD2Q9BYW2 2564 aaPredicted RBP10.78□□□□□ -0.68
ARHGEF40-207ENST00000556399 MRPL55Q7Z7F7 128 aaKnown RBP10.78□□□□□ -0.68
ARHGEF40-207ENST00000556399 ETDCA0A1B0GVM5 59 aa10.77□□□□□ -0.68
ARHGEF40-207ENST00000556399 KLK9Q2XQG4 91 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 HIGD2BQ4VC39 106 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 LINC00526Q96FQ7 95 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 FAM236DA0A1B0GTK5 79 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 FAM236CP0DP71 79 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 SCXQ7RTU7 201 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 SMIM9A6NGZ8 99 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 LYRM9A8MSI8 78 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 CD164L2Q6UWJ8 174 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 WFDC9Q8NEX5 89 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 ABCA2Q9BZC7 2435 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 A0A087WVE0 104 aa10.76□□□□□ -0.69
ARHGEF40-207ENST00000556399 TRBV7-7A0A0K0K1E9 115 aa10.75□□□□□ -0.69
ARHGEF40-207ENST00000556399 IL17DQ8TAD2 202 aa10.75□□□□□ -0.69
ARHGEF40-207ENST00000556399 XAGE1AQ9HD64 81 aa10.75□□□□□ -0.69
ARHGEF40-207ENST00000556399 UBE2BP63146 152 aa10.75□□□□□ -0.69
ARHGEF40-207ENST00000556399 Q8IZM0 81 aa10.74□□□□□ -0.69
ARHGEF40-207ENST00000556399 A0A087WZ39 114 aa10.74□□□□□ -0.69
ARHGEF40-207ENST00000556399 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
ARHGEF40-207ENST00000556399 Q9UF83 564 aa10.74□□□□□ -0.69
ARHGEF40-207ENST00000556399 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
ARHGEF40-207ENST00000556399 CCKP06307 115 aa10.73□□□□□ -0.69
ARHGEF40-207ENST00000556399 Q6ZQY7 126 aa10.73□□□□□ -0.69
ARHGEF40-207ENST00000556399 DNAH14Q0VDD8 3507 aa10.73□□□□□ -0.69
ARHGEF40-207ENST00000556399 CHD8Q9HCK8 2581 aa10.73□□□□□ -0.69
ARHGEF40-207ENST00000556399 Q8N2B8 174 aa10.72□□□□□ -0.69
ARHGEF40-207ENST00000556399 LINC00482Q8N8I6 264 aa10.72□□□□□ -0.69
ARHGEF40-207ENST00000556399 C11orf72Q8NBR9 251 aa10.72□□□□□ -0.69
ARHGEF40-207ENST00000556399 SVIPQ8NHG7 77 aa10.72□□□□□ -0.69
ARHGEF40-207ENST00000556399 LINC01006Q8NI28 216 aa10.72□□□□□ -0.69
ARHGEF40-207ENST00000556399 FHL3Q13643 280 aa10.71□□□□□ -0.69
ARHGEF40-207ENST00000556399 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
ARHGEF40-207ENST00000556399 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.69
ARHGEF40-207ENST00000556399 PRR3P79522 188 aaKnown RBP10.7□□□□□ -0.7
ARHGEF40-207ENST00000556399 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
ARHGEF40-207ENST00000556399 COX17Q14061 63 aa10.7□□□□□ -0.7
ARHGEF40-207ENST00000556399 BPY2O14599 106 aa10.69□□□□□ -0.7
ARHGEF40-207ENST00000556399 Q8N814 137 aa10.69□□□□□ -0.7
ARHGEF40-207ENST00000556399 TRIOO75962 3097 aa10.68□□□□□ -0.7
ARHGEF40-207ENST00000556399 LITAFQ99732 161 aa10.68□□□□□ -0.7
ARHGEF40-207ENST00000556399 IGLV5-45A0A087WSX0 123 aa10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 SPTBN4Q9H254 2564 aa10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 FHL2Q14192 279 aa10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 FN1P02751 2386 aaKnown RBP10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 C9orf116Q5BN46 136 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 SNURFQ9Y675 71 aa10.67□□□□□ -0.7
ARHGEF40-207ENST00000556399 ABCA12Q86UK0 2595 aa10.66□□□□□ -0.7
ARHGEF40-207ENST00000556399 NTM-AS1Q6ZSK4 140 aa10.66□□□□□ -0.7
ARHGEF40-207ENST00000556399 SHISA2Q6UWI4 295 aa10.66□□□□□ -0.7
ARHGEF40-207ENST00000556399 DOPEY1Q5JWR5 2465 aa10.65□□□□□ -0.7
ARHGEF40-207ENST00000556399 FAM218AQ96MZ4 157 aa10.64□□□□□ -0.71
ARHGEF40-207ENST00000556399 XIRP2A4UGR9 3374 aa10.63□□□□□ -0.71
ARHGEF40-207ENST00000556399 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF40-207ENST00000556399 UNQ6190/PRO20217Q6UXQ8 127 aa10.63□□□□□ -0.71
ARHGEF40-207ENST00000556399 ZNF575Q86XF7 245 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms