RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 TMEM141Q96I45 108 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 C18orf15Q96N68 181 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 SCGB3A1Q96QR1 104 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 VPS25Q9BRG1 176 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 PRORYQ9H606 182 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 SPANXB1Q9NS25 103 aaPredicted RBP2.07□□□□□ -2.08
PCNX4-212ENST00000556360 UFC1Q9Y3C8 167 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 CHTOPQ9Y3Y2 248 aaKnown RBP2.07□□□□□ -2.08
PCNX4-212ENST00000556360 RELNP78509 3460 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 ANKRD17O75179 2603 aaKnown RBP2.07□□□□□ -2.08
PCNX4-212ENST00000556360 CENPEQ02224 2701 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 DOPEY2Q9Y3R5 2298 aa2.07□□□□□ -2.08
PCNX4-212ENST00000556360 USP9YO00507 2555 aaPredicted RBP2.06□□□□□ -2.08
PCNX4-212ENST00000556360 LRRK2Q5S007 2527 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 IGHV3OR16-8A0A075B7F1 116 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 TRAV2A0A0B4J234 112 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 TRAV26-2A0A0B4J265 109 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 J3QR89 54 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 K7ERJ3 54 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 TRBV12-3P01733 135 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 CRYGDP07320 174 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 PSMB8P28062 276 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 RNASE4P34096 147 aaKnown RBP2.06□□□□□ -2.08
PCNX4-212ENST00000556360 UBE2D3P61077 147 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 UBE2D2P62837 147 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 PMVKQ15126 192 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 LYRM7Q5U5X0 104 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 MORN3Q6PF18 240 aaPredicted RBP2.06□□□□□ -2.08
PCNX4-212ENST00000556360 CLEC2AQ6UVW9 174 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 SBSPONQ8IVN8 264 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 PTH2Q96A98 100 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 AMELXQ99217 191 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 PRADC1Q9BSG0 188 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 TTTY13Q9BZ97 58 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 NHP2Q9NX24 153 aaKnown RBP2.06□□□□□ -2.08
PCNX4-212ENST00000556360 CYSLTR1Q9Y271 337 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 PHLDA3Q9Y5J5 127 aa2.06□□□□□ -2.08
PCNX4-212ENST00000556360 TIMM8BQ9Y5J9 83 aaPredicted RBP2.06□□□□□ -2.08
PCNX4-212ENST00000556360 UTP20O75691 2785 aaKnown RBP2.05□□□□□ -2.08
PCNX4-212ENST00000556360 CSPG4Q6UVK1 2322 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 SPG11Q96JI7 2443 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 ACACBO00763 2458 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 TRBV20-1A0A075B6N2 111 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 A0A096LNT2 108 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 IGHV3-49A0A0A0MS15 119 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 A0A0J9YY99 117 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 SDHAF1A6NFY7 115 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 ZNF815PA8K554 130 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 LYRM9A8MSI8 78 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 TMEM238C9JI98 176 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 H3BMG7 143 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 H3BUX3 64 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 J3QLI3 93 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 M0QY20 66 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 MSMBP08118 114 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 PRB4P10163 310 aaPredicted RBP2.05□□□□□ -2.08
PCNX4-212ENST00000556360 S100A4P26447 101 aaKnown RBP2.05□□□□□ -2.08
PCNX4-212ENST00000556360 SYNJ2BPP57105 145 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 CFAP126Q5VTH2 177 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 AMTNQ6UX39 209 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 Q6ZQT7 251 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 SLC25A29Q8N8R3 303 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 RAB37Q96AX2 223 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 RPL39LQ96EH5 51 aaKnown RBP2.05□□□□□ -2.08
PCNX4-212ENST00000556360 LINC00467Q9BRT7 94 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 RHPN1-AS1Q9BWJ2 59 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 TP53TG1Q9Y2A0 90 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 CSMD1Q96PZ7 3565 aa2.05□□□□□ -2.08
PCNX4-212ENST00000556360 FBN2P35556 2912 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 A0A0B4J2C4 111 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 B4DSR2 109 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 C19orf84I3L1E1 186 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 LEPROTO15243 131 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 IGHV3-30P01768 117 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 P0DMU3 169 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 FAM231AP0DMU4 169 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 FAM231CP0DMU5 169 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 IGHV3-30-5P0DP03 117 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 CR1P17927 2039 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 TSPEAR-AS2P59090 65 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 SNRPD3P62318 126 aaKnown RBP2.04□□□□□ -2.08
PCNX4-212ENST00000556360 PTPN13Q12923 2485 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 BRD3OSQ6XYD6 125 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 NDUFA11Q86Y39 141 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 Q8N2B8 174 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 ZNRF2Q8NHG8 242 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 PLEKHB2Q96CS7 222 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 NAA38Q9BRA0 125 aaKnown RBP2.04□□□□□ -2.08
PCNX4-212ENST00000556360 USP24Q9UPU5 2620 aa2.04□□□□□ -2.08
PCNX4-212ENST00000556360 TSSC4Q9Y5U2 329 aaPredicted RBP2.04□□□□□ -2.08
PCNX4-212ENST00000556360 TEX15Q9BXT5 2789 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 I3L3M4 83 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 J3QQQ9 107 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 GNRH2O43555 120 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 TIMM17BO60830 172 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 MGPP08493 103 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms