RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 SPATA8Q6RVD6 105 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 COX6B2Q6YFQ2 88 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 EXOC3-AS1Q8N2X6 119 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 C10orf111Q8N326 155 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 FAM24BQ8N5W8 94 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 C5orf56Q8N8D9 126 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 TMEM35BQ8NCS4 154 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 MYOZ3Q8TDC0 251 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 DYNLRB2Q8TF09 96 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 WFDC6Q9BQY6 131 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 CCDC32Q9BV29 185 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 SPANXCQ9NY87 97 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 TPRKBQ9Y3C4 175 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 UFC1Q9Y3C8 167 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 LOC285095A0A1B0GVY8 99 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 MAP1LC3B2A6NCE7 125 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 TMEM238C9JI98 176 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 M0QZK8 103 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 IGHV3-30P01768 117 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 CD2P06729 351 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 SCTP09683 121 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 IGHV3-30-5P0DP03 117 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 BCL2P10415 239 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 S100A5P33763 92 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 DEFB114Q30KQ6 69 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 TMEM78Q5T7P6 136 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 NCBP2-AS2Q69YL0 99 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 DCUN1D2Q6PH85 259 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 TOMM20LQ6UXN7 152 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 FOXI2Q6ZQN5 318 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 C5orf17Q8NAS9 161 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 Q8TAT8 98 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 DIRC1Q969H9 104 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 ZC2HC1AQ96GY0 325 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 AIF1LQ9BQI0 150 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 PCBD2Q9H0N5 130 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 SPANXA1Q9NS26 97 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 C19orf12Q9NSK7 152 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 JPT1Q9UK76 154 aa0.36□□□□□ -2.35
NEK9-208ENST00000555961 TRBV7-6A0A0J9YX20 115 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 TRDV1A0A1B0GX56 115 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 NDUFA2O43678 99 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 PPYP01298 95 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 TRACP01848 142 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 CSN2P05814 226 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 CXCL1P09341 107 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 NEFHP12036 1026 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 PIPP12273 146 aaPredicted RBP0.35□□□□□ -2.35
NEK9-208ENST00000555961 TPT1P13693 172 aaKnown RBP0.35□□□□□ -2.35
NEK9-208ENST00000555961 FABP4P15090 132 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 PDE6GP18545 87 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 TPPP2P59282 170 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 TAS2R41P59536 307 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 DNAJB13P59910 316 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 SARNPP82979 210 aaKnown RBP0.35□□□□□ -2.35
NEK9-208ENST00000555961 SNCBQ16143 134 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 MINOS1Q5TGZ0 78 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 OR2T2Q6IF00 324 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 GLIPR1L1Q6UWM5 242 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 TMEM14EPQ6UXP3 125 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 IZUMO2Q6UXV1 221 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 SMIM20Q8N5G0 67 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 OR9Q1Q8NGQ5 310 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 OR5AK2Q8NH90 309 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 CDC26Q8NHZ8 85 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 BORCS8Q96FH0 119 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 GAFA1Q96PS6 74 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 GGACTQ9BVM4 153 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 LINC00470Q9BZP3 86 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 NIT2Q9NQR4 276 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 KAAG1Q9UBP8 84 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 NAT8BQ9UHF3 227 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 ASB4Q9Y574 426 aa0.35□□□□□ -2.35
NEK9-208ENST00000555961 PITX3O75364 302 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 SPART-AS1P0CW21 52 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 DIAPH2-AS1Q14236 149 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 LTC4SQ16873 150 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 SPINK6Q6UWN8 80 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 Q6ZQY7 126 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 LINC00269Q8N2A0 174 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 TCTEX1D1Q8N7M0 179 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 DYDC1Q8WWB3 177 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 CCDC115Q96NT0 180 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 CIB3Q96Q77 187 aaPredicted RBP0.34□□□□□ -2.36
NEK9-208ENST00000555961 C10orf95Q9H7T3 257 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 TMEM14BQ9NUH8 114 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 GID8Q9NWU2 228 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 NDUFAF1Q9Y375 327 aa0.34□□□□□ -2.36
NEK9-208ENST00000555961 A0A096LPF7 62 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.33□□□□□ -2.36
NEK9-208ENST00000555961 TRBV30A0A0K0K1B3 111 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 TRBV27A0A0K0K1C4 114 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 A0A1B0GV72 72 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 LOC107986453A0A1B0GWG9 222 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 PVALEFA0A1B0GWK0 134 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 IFITM5A6NNB3 132 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 C5orf58C9J3I9 102 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 SULT1C4O75897 302 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms