RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 RBX1P62877 108 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 SS18Q15532 418 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 LELP1Q5T871 98 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 C10orf126Q8N4M7 172 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 HTN3P15516 51 aa10.07□□□□□ -0.8
IFT43-209ENST00000555305 HERV-K104P63124 156 aa10.07□□□□□ -0.8
IFT43-209ENST00000555305 GTF2H5Q6ZYL4 71 aa10.07□□□□□ -0.8
IFT43-209ENST00000555305 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
IFT43-209ENST00000555305 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
IFT43-209ENST00000555305 FBN1P35555 2871 aaKnown RBP10.06□□□□□ -0.8
IFT43-209ENST00000555305 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
IFT43-209ENST00000555305 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
IFT43-209ENST00000555305 RAB37Q96AX2 223 aa10.06□□□□□ -0.8
IFT43-209ENST00000555305 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
IFT43-209ENST00000555305 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
IFT43-209ENST00000555305 A0A096LPF7 62 aa10.05□□□□□ -0.8
IFT43-209ENST00000555305 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.05□□□□□ -0.8
IFT43-209ENST00000555305 LINC00959A0A1B0GUT2 108 aa10.05□□□□□ -0.8
IFT43-209ENST00000555305 H3BUT2 72 aa10.05□□□□□ -0.8
IFT43-209ENST00000555305 FABP2P12104 132 aa10.05□□□□□ -0.8
IFT43-209ENST00000555305 RETNQ9HD89 108 aa10.05□□□□□ -0.8
IFT43-209ENST00000555305 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
IFT43-209ENST00000555305 A0A087WZ39 114 aa10.04□□□□□ -0.8
IFT43-209ENST00000555305 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
IFT43-209ENST00000555305 A0A1W2PPM0 123 aa10.04□□□□□ -0.8
IFT43-209ENST00000555305 IFITM1P13164 125 aa10.04□□□□□ -0.8
IFT43-209ENST00000555305 C21orf62-AS1Q17RA5 79 aa10.04□□□□□ -0.8
IFT43-209ENST00000555305 MIAQ16674 131 aa10.03□□□□□ -0.8
IFT43-209ENST00000555305 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
IFT43-209ENST00000555305 GAGE10A6NGK3 116 aa10.02□□□□□ -0.81
IFT43-209ENST00000555305 PPDPFQ9H3Y8 114 aa10.02□□□□□ -0.81
IFT43-209ENST00000555305 Q9H8V8 135 aa10.02□□□□□ -0.81
IFT43-209ENST00000555305 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 A0A0J9YWU9 116 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 K7ERJ3 54 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 LITAFQ99732 161 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 IGLL5B9A064 214 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 COX7B2Q8TF08 81 aa10.01□□□□□ -0.81
IFT43-209ENST00000555305 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
IFT43-209ENST00000555305 A0A0B4J2C4 111 aa10□□□□□ -0.81
IFT43-209ENST00000555305 K7EP34 96 aa10□□□□□ -0.81
IFT43-209ENST00000555305 ANGP03950 147 aaKnown RBP10□□□□□ -0.81
IFT43-209ENST00000555305 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
IFT43-209ENST00000555305 Q6ZTC4 211 aa10□□□□□ -0.81
IFT43-209ENST00000555305 MUSTN1Q8IVN3 82 aa10□□□□□ -0.81
IFT43-209ENST00000555305 PRSS2P07478 247 aa9.99□□□□□ -0.81
IFT43-209ENST00000555305 REG3AQ06141 175 aa9.99□□□□□ -0.81
IFT43-209ENST00000555305 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
IFT43-209ENST00000555305 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 STAB1Q9NY15 2570 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 MAST4O15021 2626 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 DEFB131BA0A096LNP1 70 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 A4D1N5 150 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 K7EIL1 84 aa9.98□□□□□ -0.81
IFT43-209ENST00000555305 APOMO95445 188 aa9.97□□□□□ -0.81
IFT43-209ENST00000555305 CFC1BP0CG36 223 aa9.97□□□□□ -0.81
IFT43-209ENST00000555305 CFC1P0CG37 223 aa9.97□□□□□ -0.81
IFT43-209ENST00000555305 DEFB121Q5J5C9 76 aa9.97□□□□□ -0.81
IFT43-209ENST00000555305 MEIG1Q5JSS6 88 aa9.97□□□□□ -0.81
IFT43-209ENST00000555305 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
IFT43-209ENST00000555305 XCL1P47992 114 aa9.96□□□□□ -0.81
IFT43-209ENST00000555305 NBEAL2Q6ZNJ1 2754 aa9.96□□□□□ -0.82
IFT43-209ENST00000555305 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
IFT43-209ENST00000555305 ADAMTSL4-AS1Q5T5F5 129 aa9.96□□□□□ -0.82
IFT43-209ENST00000555305 Q8IZM0 81 aa9.96□□□□□ -0.82
IFT43-209ENST00000555305 PRR34Q9NV39 138 aa9.96□□□□□ -0.82
IFT43-209ENST00000555305 COX7A2LO14548 114 aa9.95□□□□□ -0.82
IFT43-209ENST00000555305 CXCL5P42830 114 aa9.95□□□□□ -0.82
IFT43-209ENST00000555305 C15orf53Q8NAA6 179 aa9.95□□□□□ -0.82
IFT43-209ENST00000555305 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
IFT43-209ENST00000555305 TRAV8-4A0A0B4J246 113 aa9.94□□□□□ -0.82
IFT43-209ENST00000555305 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
IFT43-209ENST00000555305 C5orf38Q86SI9 138 aa9.94□□□□□ -0.82
IFT43-209ENST00000555305 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
IFT43-209ENST00000555305 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
IFT43-209ENST00000555305 TSPAN13O95857 204 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 CRPP02741 224 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 MALP21145 153 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 COL6A5A8TX70 2615 aa9.93□□□□□ -0.82
IFT43-209ENST00000555305 CLPSL2Q6UWE3 100 aa9.92□□□□□ -0.82
IFT43-209ENST00000555305 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
IFT43-209ENST00000555305 MDFIQ99750 246 aa9.92□□□□□ -0.82
IFT43-209ENST00000555305 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
IFT43-209ENST00000555305 IGHV3-33P01772 117 aa9.9□□□□□ -0.82
IFT43-209ENST00000555305 PRB2P02812 416 aaPredicted RBP9.9□□□□□ -0.82
IFT43-209ENST00000555305 CKS1BP61024 79 aa9.9□□□□□ -0.82
IFT43-209ENST00000555305 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
IFT43-209ENST00000555305 KLK12Q9UKR0 248 aa9.9□□□□□ -0.82
IFT43-209ENST00000555305 MRAPQ8TCY5 172 aa9.89□□□□□ -0.83
IFT43-209ENST00000555305 FOXI1Q12951 378 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms