RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 DEFB1P60022 68 aa9.67□□□□□ -0.86
SIX1-203ENST00000554986 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
SIX1-203ENST00000554986 J3KT08 172 aa9.66□□□□□ -0.86
SIX1-203ENST00000554986 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
SIX1-203ENST00000554986 DAND5Q8N907 189 aa9.66□□□□□ -0.86
SIX1-203ENST00000554986 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
SIX1-203ENST00000554986 COX7A2LO14548 114 aa9.66□□□□□ -0.86
SIX1-203ENST00000554986 SLURP1P55000 103 aa9.66□□□□□ -0.86
SIX1-203ENST00000554986 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
SIX1-203ENST00000554986 TRACP01848 142 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 CRYGAP11844 174 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 COX7CP15954 63 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 HERVK_113P63121 156 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 FAM74A4Q5TZK3 123 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 SMCR5Q8TEV8 140 aa9.65□□□□□ -0.86
SIX1-203ENST00000554986 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
SIX1-203ENST00000554986 ID1P41134 155 aa9.64□□□□□ -0.87
SIX1-203ENST00000554986 HIST1H4AP62805 103 aaKnown RBP9.64□□□□□ -0.87
SIX1-203ENST00000554986 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
SIX1-203ENST00000554986 PF4P02776 101 aa9.64□□□□□ -0.87
SIX1-203ENST00000554986 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
SIX1-203ENST00000554986 NDUFA1O15239 70 aa9.63□□□□□ -0.87
SIX1-203ENST00000554986 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
SIX1-203ENST00000554986 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
SIX1-203ENST00000554986 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
SIX1-203ENST00000554986 BEAN1Q3B7T3 259 aa9.62□□□□□ -0.87
SIX1-203ENST00000554986 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
SIX1-203ENST00000554986 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
SIX1-203ENST00000554986 ATOX1O00244 68 aa9.61□□□□□ -0.87
SIX1-203ENST00000554986 INAFM2P0DMQ5 153 aa9.61□□□□□ -0.87
SIX1-203ENST00000554986 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
SIX1-203ENST00000554986 K7EMT4 169 aa9.61□□□□□ -0.87
SIX1-203ENST00000554986 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
SIX1-203ENST00000554986 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
SIX1-203ENST00000554986 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
SIX1-203ENST00000554986 WIPF1O43516 503 aa9.6□□□□□ -0.87
SIX1-203ENST00000554986 TIRAPP58753 221 aa9.6□□□□□ -0.87
SIX1-203ENST00000554986 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
SIX1-203ENST00000554986 EDN2P20800 178 aa9.59□□□□□ -0.87
SIX1-203ENST00000554986 DAZ2Q13117 558 aaKnown RBP9.59□□□□□ -0.87
SIX1-203ENST00000554986 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
SIX1-203ENST00000554986 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
SIX1-203ENST00000554986 WFDC9Q8NEX5 89 aa9.59□□□□□ -0.87
SIX1-203ENST00000554986 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
SIX1-203ENST00000554986 ZNF415Q09FC8 603 aa9.58□□□□□ -0.88
SIX1-203ENST00000554986 GAGE2AQ6NT46 116 aa9.58□□□□□ -0.88
SIX1-203ENST00000554986 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
SIX1-203ENST00000554986 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
SIX1-203ENST00000554986 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
SIX1-203ENST00000554986 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
SIX1-203ENST00000554986 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
SIX1-203ENST00000554986 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
SIX1-203ENST00000554986 NPC2P61916 151 aa9.57□□□□□ -0.88
SIX1-203ENST00000554986 PIK3CD-AS1Q5SR53 167 aa9.57□□□□□ -0.88
SIX1-203ENST00000554986 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
SIX1-203ENST00000554986 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
SIX1-203ENST00000554986 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
SIX1-203ENST00000554986 TMEM258P61165 79 aa9.55□□□□□ -0.88
SIX1-203ENST00000554986 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
SIX1-203ENST00000554986 IGKV3-7A0A075B6H7 116 aa9.54□□□□□ -0.88
SIX1-203ENST00000554986 A8MZ25 164 aa9.54□□□□□ -0.88
SIX1-203ENST00000554986 FAM19A3Q7Z5A8 133 aa9.54□□□□□ -0.88
SIX1-203ENST00000554986 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
SIX1-203ENST00000554986 OXLD1Q5BKU9 147 aa9.54□□□□□ -0.88
SIX1-203ENST00000554986 OVOL2Q9BRP0 275 aa9.54□□□□□ -0.88
SIX1-203ENST00000554986 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
SIX1-203ENST00000554986 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
SIX1-203ENST00000554986 SNRPD3P62318 126 aaKnown RBP9.52□□□□□ -0.89
SIX1-203ENST00000554986 Q6JHZ5 121 aa9.52□□□□□ -0.89
SIX1-203ENST00000554986 C9orf66Q5T8R8 295 aa9.51□□□□□ -0.89
SIX1-203ENST00000554986 NBEAL1Q6ZS30 2694 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 K7EQG2 157 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 MALP21145 153 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
SIX1-203ENST00000554986 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
SIX1-203ENST00000554986 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 SERP2Q8N6R1 65 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 Q9H8V8 135 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 IGLV1-51P01701 117 aa9.5□□□□□ -0.89
SIX1-203ENST00000554986 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
SIX1-203ENST00000554986 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
SIX1-203ENST00000554986 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
SIX1-203ENST00000554986 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
SIX1-203ENST00000554986 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
SIX1-203ENST00000554986 UPK3BQ9BT76 320 aa9.49□□□□□ -0.89
SIX1-203ENST00000554986 DYNLRB2Q8TF09 96 aa9.48□□□□□ -0.89
SIX1-203ENST00000554986 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
SIX1-203ENST00000554986 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
SIX1-203ENST00000554986 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
SIX1-203ENST00000554986 LINC00467Q9BRT7 94 aa9.48□□□□□ -0.89
SIX1-203ENST00000554986 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
SIX1-203ENST00000554986 SPINK13Q1W4C9 94 aa9.48□□□□□ -0.89
SIX1-203ENST00000554986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
SIX1-203ENST00000554986 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
SIX1-203ENST00000554986 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.89
SIX1-203ENST00000554986 KRTAP10-11P60412 298 aa9.46□□□□□ -0.89
SIX1-203ENST00000554986 A8MTW9 85 aa9.46□□□□□ -0.9
SIX1-203ENST00000554986 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms