RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 PSMB2P49721 201 aa12.64□□□□□ -0.39
MEG3-224ENST00000554639 SETD2Q9BYW2 2564 aaPredicted RBP12.64□□□□□ -0.39
MEG3-224ENST00000554639 A0A0B4J2C4 111 aa12.63□□□□□ -0.39
MEG3-224ENST00000554639 NDUFA1O15239 70 aa12.63□□□□□ -0.39
MEG3-224ENST00000554639 PRO0255Q9UI72 69 aa12.63□□□□□ -0.39
MEG3-224ENST00000554639 NSD1Q96L73 2696 aaPredicted RBP12.62□□□□□ -0.39
MEG3-224ENST00000554639 LOC100131303A0A0U1RQF7 123 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 CFC1BP0CG36 223 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 CFC1P0CG37 223 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 LITAFQ99732 161 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 PRO1854Q9UHT4 67 aa12.62□□□□□ -0.39
MEG3-224ENST00000554639 IFITM1P13164 125 aa12.61□□□□□ -0.39
MEG3-224ENST00000554639 MIFP14174 115 aa12.61□□□□□ -0.39
MEG3-224ENST00000554639 SPATA3Q8NHX4 192 aa12.61□□□□□ -0.39
MEG3-224ENST00000554639 C2CD3Q4AC94 2353 aa12.61□□□□□ -0.39
MEG3-224ENST00000554639 FN1P02751 2386 aaKnown RBP12.6□□□□□ -0.39
MEG3-224ENST00000554639 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
MEG3-224ENST00000554639 COX6A2Q02221 97 aa12.59□□□□□ -0.39
MEG3-224ENST00000554639 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
MEG3-224ENST00000554639 MIAQ16674 131 aa12.59□□□□□ -0.39
MEG3-224ENST00000554639 MUSTN1Q8IVN3 82 aa12.59□□□□□ -0.39
MEG3-224ENST00000554639 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
MEG3-224ENST00000554639 A4D1N5 150 aa12.59□□□□□ -0.39
MEG3-224ENST00000554639 TRAV13-1A0A0B4J241 112 aa12.58□□□□□ -0.4
MEG3-224ENST00000554639 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
MEG3-224ENST00000554639 SCGB1C2P0DMR2 95 aa12.58□□□□□ -0.4
MEG3-224ENST00000554639 FAM222AQ5U5X8 452 aa12.58□□□□□ -0.4
MEG3-224ENST00000554639 COPS9Q8WXC6 57 aa12.58□□□□□ -0.4
MEG3-224ENST00000554639 TCL1BO95988 128 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 HERV-K104P63124 156 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
MEG3-224ENST00000554639 PPDPFQ9H3Y8 114 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
MEG3-224ENST00000554639 GYPEP15421 78 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 GAGE2BQ13066 116 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 GAGE2EQ4V326 116 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 GAGE2DQ9UEU5 116 aa12.57□□□□□ -0.4
MEG3-224ENST00000554639 JMJD1CQ15652 2540 aa12.56□□□□□ -0.4
MEG3-224ENST00000554639 A0A1B0GUV1 79 aa12.56□□□□□ -0.4
MEG3-224ENST00000554639 F5H768 121 aa12.56□□□□□ -0.4
MEG3-224ENST00000554639 DEFB135Q30KP9 77 aa12.56□□□□□ -0.4
MEG3-224ENST00000554639 ANKRD29Q8N6D5 301 aa12.56□□□□□ -0.4
MEG3-224ENST00000554639 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
MEG3-224ENST00000554639 SS18L2Q9UHA2 77 aa12.55□□□□□ -0.4
MEG3-224ENST00000554639 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
MEG3-224ENST00000554639 SNCGO76070 127 aa12.54□□□□□ -0.4
MEG3-224ENST00000554639 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
MEG3-224ENST00000554639 PAX4O43316 350 aa12.54□□□□□ -0.4
MEG3-224ENST00000554639 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
MEG3-224ENST00000554639 RPL13AP40429 203 aaKnown RBP12.53□□□□□ -0.4
MEG3-224ENST00000554639 Q8NAQ8 132 aa12.53□□□□□ -0.4
MEG3-224ENST00000554639 HIVEP1P15822 2718 aa12.52□□□□□ -0.4
MEG3-224ENST00000554639 A8MZ25 164 aa12.52□□□□□ -0.41
MEG3-224ENST00000554639 SLC25A20O43772 301 aa12.52□□□□□ -0.41
MEG3-224ENST00000554639 PRSS2P07478 247 aa12.52□□□□□ -0.41
MEG3-224ENST00000554639 DAD1P61803 113 aa12.52□□□□□ -0.41
MEG3-224ENST00000554639 ADAMTSL4-AS1Q5T5F5 129 aa12.52□□□□□ -0.41
MEG3-224ENST00000554639 ZNF625Q96I27 306 aaPredicted RBP12.52□□□□□ -0.41
MEG3-224ENST00000554639 B5MCH6 92 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 ATP5G1P05496 136 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 IGHV4-30-4P0DP06 118 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 SFTA2Q6UW10 78 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 Q9H8V8 135 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
MEG3-224ENST00000554639 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
MEG3-224ENST00000554639 IGLV4-60A0A075B6I1 120 aa12.5□□□□□ -0.41
MEG3-224ENST00000554639 LINC01561Q8N1V8 128 aa12.5□□□□□ -0.41
MEG3-224ENST00000554639 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
MEG3-224ENST00000554639 IGHV3OR16-9A0A0B4J2B5 98 aa12.48□□□□□ -0.41
MEG3-224ENST00000554639 PRIMA1Q86XR5 153 aa12.48□□□□□ -0.41
MEG3-224ENST00000554639 A0A087WZ39 114 aa12.48□□□□□ -0.41
MEG3-224ENST00000554639 TRBV30A0A0K0K1B3 111 aa12.47□□□□□ -0.41
MEG3-224ENST00000554639 EIF4EBP3O60516 100 aaPredicted RBP12.47□□□□□ -0.41
MEG3-224ENST00000554639 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
MEG3-224ENST00000554639 LINC00959A0A1B0GUT2 108 aa12.46□□□□□ -0.41
MEG3-224ENST00000554639 SS18Q15532 418 aa12.46□□□□□ -0.41
MEG3-224ENST00000554639 ATXN8Q156A1 80 aa12.46□□□□□ -0.41
MEG3-224ENST00000554639 COX7B2Q8TF08 81 aa12.46□□□□□ -0.41
MEG3-224ENST00000554639 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
MEG3-224ENST00000554639 FAM240AA0A1B0GVK7 77 aa12.45□□□□□ -0.42
MEG3-224ENST00000554639 LINC00308Q8TCZ7 52 aa12.45□□□□□ -0.42
MEG3-224ENST00000554639 KRTAP24-1Q3LI83 254 aa12.44□□□□□ -0.42
MEG3-224ENST00000554639 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
MEG3-224ENST00000554639 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
MEG3-224ENST00000554639 C9JAW5 83 aa12.43□□□□□ -0.42
MEG3-224ENST00000554639 MEIG1Q5JSS6 88 aa12.43□□□□□ -0.42
MEG3-224ENST00000554639 TRAV8-4A0A0B4J246 113 aa12.42□□□□□ -0.42
MEG3-224ENST00000554639 Q1RN00 199 aa12.42□□□□□ -0.42
MEG3-224ENST00000554639 COX6CP09669 75 aa12.42□□□□□ -0.42
MEG3-224ENST00000554639 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
MEG3-224ENST00000554639 DEFB4AO15263 64 aa12.41□□□□□ -0.42
MEG3-224ENST00000554639 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
MEG3-224ENST00000554639 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
MEG3-224ENST00000554639 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
MEG3-224ENST00000554639 H3BT86 120 aa12.4□□□□□ -0.42
MEG3-224ENST00000554639 DEFB121Q5J5C9 76 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms