RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TRGV2A0A075B6R0 118 aa8.34□□□□□ -1.07
SHMT2-212ENST00000554467 PLAC8L1A1L4L8 177 aa8.34□□□□□ -1.07
SHMT2-212ENST00000554467 CYSRT1A8MQ03 144 aa8.34□□□□□ -1.07
SHMT2-212ENST00000554467 IL17DQ8TAD2 202 aa8.34□□□□□ -1.07
SHMT2-212ENST00000554467 DEFB4AO15263 64 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-212ENST00000554467 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 LOC100131303A0A0U1RQF7 123 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 A8MZ25 164 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 PAPPA-AS1Q5QFB9 102 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
SHMT2-212ENST00000554467 ANK2Q01484 3957 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 H7C423 109 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
SHMT2-212ENST00000554467 RHOHQ15669 191 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 TRIAP1O43715 76 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 DEFB130BP0DP73 79 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 DEFB130AP0DP74 79 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
SHMT2-212ENST00000554467 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
SHMT2-212ENST00000554467 ATXN8Q156A1 80 aa8.31□□□□□ -1.08
SHMT2-212ENST00000554467 KLK5Q9Y337 293 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-212ENST00000554467 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
SHMT2-212ENST00000554467 C16orf74Q96GX8 76 aa8.31□□□□□ -1.08
SHMT2-212ENST00000554467 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
SHMT2-212ENST00000554467 FAM104AQ969W3 186 aa8.31□□□□□ -1.08
SHMT2-212ENST00000554467 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
SHMT2-212ENST00000554467 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
SHMT2-212ENST00000554467 PIK3CD-AS1Q5SR53 167 aa8.3□□□□□ -1.08
SHMT2-212ENST00000554467 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
SHMT2-212ENST00000554467 TRBV7-7A0A0K0K1E9 115 aa8.3□□□□□ -1.08
SHMT2-212ENST00000554467 SPANXA1Q9NS26 97 aa8.29□□□□□ -1.08
SHMT2-212ENST00000554467 K7EQD1 137 aa8.29□□□□□ -1.08
SHMT2-212ENST00000554467 DNAJC30Q96LL9 226 aa8.29□□□□□ -1.08
SHMT2-212ENST00000554467 EDA2RQ9HAV5 297 aa8.29□□□□□ -1.08
SHMT2-212ENST00000554467 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
SHMT2-212ENST00000554467 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
SHMT2-212ENST00000554467 DAND5Q8N907 189 aa8.29□□□□□ -1.08
SHMT2-212ENST00000554467 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
SHMT2-212ENST00000554467 FAM236AA0A1B0GUQ0 79 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 FAM236BA0A1B0GV22 79 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 TRGV4A0A0C4DH28 118 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
SHMT2-212ENST00000554467 DGAT2L7PQ6IED9 249 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 TRBV30A0A0K0K1B3 111 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 KRTAP24-1Q3LI83 254 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
SHMT2-212ENST00000554467 CMYA5Q8N3K9 4069 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 DEFB121Q5J5C9 76 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 UBE2D4Q9Y2X8 147 aa8.27□□□□□ -1.09
SHMT2-212ENST00000554467 RPL36AP83881 106 aaKnown RBP8.26□□□□□ -1.09
SHMT2-212ENST00000554467 C5orf47Q569G3 176 aa8.26□□□□□ -1.09
SHMT2-212ENST00000554467 NTM-AS1Q6ZSK4 140 aa8.26□□□□□ -1.09
SHMT2-212ENST00000554467 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
SHMT2-212ENST00000554467 RPL36ALQ969Q0 106 aaKnown RBP8.26□□□□□ -1.09
SHMT2-212ENST00000554467 IGHV3-30-3P0DP02 117 aa8.26□□□□□ -1.09
SHMT2-212ENST00000554467 HERVK_113P63121 156 aa8.26□□□□□ -1.09
SHMT2-212ENST00000554467 X6R8D5 127 aa8.26□□□□□ -1.09
SHMT2-212ENST00000554467 SMIM9A6NGZ8 99 aa8.25□□□□□ -1.09
SHMT2-212ENST00000554467 LEPROTO15243 131 aa8.25□□□□□ -1.09
SHMT2-212ENST00000554467 C3orf22Q8N5N4 141 aa8.25□□□□□ -1.09
SHMT2-212ENST00000554467 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
SHMT2-212ENST00000554467 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
SHMT2-212ENST00000554467 LITAFQ99732 161 aa8.25□□□□□ -1.09
SHMT2-212ENST00000554467 A0A096LPF7 62 aa8.24□□□□□ -1.09
SHMT2-212ENST00000554467 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
SHMT2-212ENST00000554467 OVOL2Q9BRP0 275 aa8.24□□□□□ -1.09
SHMT2-212ENST00000554467 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
SHMT2-212ENST00000554467 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
SHMT2-212ENST00000554467 FHL2Q14192 279 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 MGAM2Q2M2H8 2515 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 A0A0J9YXY3 114 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
SHMT2-212ENST00000554467 IGHV4-30-4P0DP06 118 aa8.22□□□□□ -1.09
SHMT2-212ENST00000554467 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.09
SHMT2-212ENST00000554467 H3BT86 120 aa8.21□□□□□ -1.09
SHMT2-212ENST00000554467 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-212ENST00000554467 LINC00526Q96FQ7 95 aa8.21□□□□□ -1.1
SHMT2-212ENST00000554467 C2orf48Q96LS8 159 aa8.21□□□□□ -1.1
SHMT2-212ENST00000554467 DAZ4Q86SG3 579 aaKnown RBP8.2□□□□□ -1.1
SHMT2-212ENST00000554467 WFDC9Q8NEX5 89 aa8.2□□□□□ -1.1
SHMT2-212ENST00000554467 DAZ3Q9NR90 486 aaKnown RBP8.2□□□□□ -1.1
SHMT2-212ENST00000554467 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
SHMT2-212ENST00000554467 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
SHMT2-212ENST00000554467 LST1O00453 97 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms