RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 HERVK_113P63121 156 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 REG3AQ06141 175 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 PRR9Q5T870 116 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 LYRM7Q5U5X0 104 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 UNQ9165/PRO28630Q6UXU0 137 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 Q6ZQT7 251 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 ORMDL3Q8N138 153 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 ORAOV1Q8WV07 137 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 ST20Q9HBF5 79 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 MRPL16Q9NX20 251 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 DNAH7Q8WXX0 4024 aa3.64□□□□□ -1.83
MTHFD1-206ENST00000554353 IGLV2-18A0A075B6J9 118 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 TRAV4A0A0B4J268 109 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 H3BUX3 64 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 LGALS9O00182 355 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 NDUFA4O00483 81 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 SMIM17P0DL12 118 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 BLCAPP62952 87 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 LY6EQ16553 131 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 COL5A1-AS1Q5SY13 56 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 ZFAND2AQ8N6M9 145 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 OR10AG1Q8NH19 301 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 USMG5Q96IX5 58 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 ZNF702PQ9H963 129 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 LENEPQ9Y5L5 61 aa3.63□□□□□ -1.83
MTHFD1-206ENST00000554353 DUSP14O95147 198 aaKnown RBP3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 APOMO95445 188 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 CHTF8P0CG12 524 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 CKS2P33552 79 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 FXYD7P58549 80 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 PRR4Q16378 134 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 LGALS9BQ3B8N2 356 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 LGALS9CQ6DKI2 356 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 Q6Q795 121 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 OR4X2Q8NGF9 303 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 AP1S3Q96PC3 154 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 PMCHL2Q9BQD1 86 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 GTSF1LQ9H1H1 148 aa3.62□□□□□ -1.83
MTHFD1-206ENST00000554353 LYSTQ99698 3801 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 TENM3Q9P273 2699 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 NDUFC2-KCTD14E9PQ53 114 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 M0R381 172 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 OVOL1O14753 267 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 IGHV3-11P01762 117 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 HBDP02042 147 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 COX8AP10176 69 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 AZU1P20160 251 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 FCER1GP30273 86 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 HINT1P49773 126 aaPredicted RBP3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 DEFB1P60022 68 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 SLC25A34Q6PIV7 304 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 HRCT1Q6UXD1 115 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 C2orf91Q6ZV80 131 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 Q8N8P6 123 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 OR8A1Q8NGG7 326 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 TIMM17AQ99595 171 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 PRADC1Q9BSG0 188 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 IMUPQ9GZP8 106 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 C16orf95Q9H693 158 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 TIMM8BQ9Y5J9 83 aaPredicted RBP3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
MTHFD1-206ENST00000554353 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 DPM2O94777 84 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 PSMB8P28062 276 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 CXCL6P80162 114 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 MPV17L2Q567V2 206 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 C10orf99Q6UWK7 81 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 RHPN1-AS1Q9BWJ2 59 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 NXT2Q9NPJ8 142 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 MUC4Q99102 2169 aa3.6□□□□□ -1.83
MTHFD1-206ENST00000554353 TRAV21A0A0B4J279 112 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 H3BVH4 76 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 TAX1BP3O14907 124 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 GNRH2O43555 120 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 PRB2P02812 416 aaPredicted RBP3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 RNASE3P12724 160 aaKnown RBP3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 EGFEM1PQ0D2K5 195 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 MYOZ3Q8TDC0 251 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 DCANP1Q8TF63 244 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 CST9LQ9H4G1 147 aa3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 ZNF706Q9Y5V0 76 aaPredicted RBP3.59□□□□□ -1.83
MTHFD1-206ENST00000554353 CCL25O15444 150 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 RNASE4P34096 147 aaKnown RBP3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 LINC00315P59091 139 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 Q1RN00 199 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 CASC10Q5T4H9 136 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 C18orf15Q96N68 181 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 C11orf68Q9H3H3 251 aaKnown RBP3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 HHLA3Q9XRX5 114 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 KIF25-AS1Q9Y6Z4 181 aa3.58□□□□□ -1.84
MTHFD1-206ENST00000554353 DYNC2H1Q8NCM8 4307 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms