RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
ACTN1-211ENST00000553882 VWFP04275 2813 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 NOTCH2Q04721 2471 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 TIMM17BO60830 172 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 HERV-K104P63124 156 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 PRIMA1Q86XR5 153 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 FASNP49327 2511 aaKnown RBP10.34□□□□□ -0.75
ACTN1-211ENST00000553882 HIVEP2P31629 2446 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 KRTAP1-1Q07627 177 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 LINC00308Q8TCZ7 52 aa10.34□□□□□ -0.75
ACTN1-211ENST00000553882 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
ACTN1-211ENST00000553882 IFITM1P13164 125 aa10.33□□□□□ -0.76
ACTN1-211ENST00000553882 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
ACTN1-211ENST00000553882 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
ACTN1-211ENST00000553882 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
ACTN1-211ENST00000553882 TMEM243Q9BU79 118 aa10.33□□□□□ -0.76
ACTN1-211ENST00000553882 H7C423 109 aa10.32□□□□□ -0.76
ACTN1-211ENST00000553882 C2orf82Q6UX34 121 aa10.32□□□□□ -0.76
ACTN1-211ENST00000553882 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
ACTN1-211ENST00000553882 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
ACTN1-211ENST00000553882 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
ACTN1-211ENST00000553882 C19orf73Q9NVV2 129 aa10.32□□□□□ -0.76
ACTN1-211ENST00000553882 F5H768 121 aa10.31□□□□□ -0.76
ACTN1-211ENST00000553882 M0QXV9 152 aa10.31□□□□□ -0.76
ACTN1-211ENST00000553882 GAGE6Q13070 117 aa10.31□□□□□ -0.76
ACTN1-211ENST00000553882 RNASE1P07998 156 aaKnown RBP10.3□□□□□ -0.76
ACTN1-211ENST00000553882 CKS1BP61024 79 aa10.3□□□□□ -0.76
ACTN1-211ENST00000553882 RNF183Q96D59 192 aa10.3□□□□□ -0.76
ACTN1-211ENST00000553882 A0A1B0GV72 72 aa10.29□□□□□ -0.76
ACTN1-211ENST00000553882 CSNK1G2-AS1Q8NCQ2 148 aa10.29□□□□□ -0.76
ACTN1-211ENST00000553882 LST1O00453 97 aa10.29□□□□□ -0.76
ACTN1-211ENST00000553882 FAM19A3Q7Z5A8 133 aa10.29□□□□□ -0.76
ACTN1-211ENST00000553882 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
ACTN1-211ENST00000553882 TMEM262E9PQX1 116 aa10.28□□□□□ -0.76
ACTN1-211ENST00000553882 TOMM7Q9P0U1 55 aa10.28□□□□□ -0.76
ACTN1-211ENST00000553882 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.76
ACTN1-211ENST00000553882 C16orf95Q9H693 158 aa10.27□□□□□ -0.76
ACTN1-211ENST00000553882 TRBV6-4A0A1B0GX49 114 aa10.27□□□□□ -0.77
ACTN1-211ENST00000553882 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
ACTN1-211ENST00000553882 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
ACTN1-211ENST00000553882 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-211ENST00000553882 SMR3AQ99954 134 aa10.26□□□□□ -0.77
ACTN1-211ENST00000553882 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
ACTN1-211ENST00000553882 CHCHD5Q9BSY4 110 aa10.26□□□□□ -0.77
ACTN1-211ENST00000553882 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
ACTN1-211ENST00000553882 CRLF1O75462 422 aa10.25□□□□□ -0.77
ACTN1-211ENST00000553882 FHL2Q14192 279 aa10.25□□□□□ -0.77
ACTN1-211ENST00000553882 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
ACTN1-211ENST00000553882 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
ACTN1-211ENST00000553882 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
ACTN1-211ENST00000553882 H3BT86 120 aa10.24□□□□□ -0.77
ACTN1-211ENST00000553882 TRAV26-1A0A087WT03 109 aa10.23□□□□□ -0.77
ACTN1-211ENST00000553882 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
ACTN1-211ENST00000553882 HILS1P60008 231 aa10.22□□□□□ -0.77
ACTN1-211ENST00000553882 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
ACTN1-211ENST00000553882 COX7A2LO14548 114 aa10.21□□□□□ -0.77
ACTN1-211ENST00000553882 SNCGO76070 127 aa10.21□□□□□ -0.77
ACTN1-211ENST00000553882 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.77
ACTN1-211ENST00000553882 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
ACTN1-211ENST00000553882 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.77
ACTN1-211ENST00000553882 OTOGQ6ZRI0 2925 aa10.21□□□□□ -0.77
ACTN1-211ENST00000553882 C5orf38Q86SI9 138 aa10.21□□□□□ -0.78
ACTN1-211ENST00000553882 PF4P02776 101 aa10.2□□□□□ -0.78
ACTN1-211ENST00000553882 A0A096LPF7 62 aa10.2□□□□□ -0.78
ACTN1-211ENST00000553882 KRTAP10-3P60369 221 aa10.2□□□□□ -0.78
ACTN1-211ENST00000553882 C11orf68Q9H3H3 251 aaKnown RBP10.2□□□□□ -0.78
ACTN1-211ENST00000553882 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
ACTN1-211ENST00000553882 LINC00158P58513 81 aa10.19□□□□□ -0.78
ACTN1-211ENST00000553882 GYPEP15421 78 aa10.18□□□□□ -0.78
ACTN1-211ENST00000553882 PFN2P35080 140 aa10.18□□□□□ -0.78
ACTN1-211ENST00000553882 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
ACTN1-211ENST00000553882 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
ACTN1-211ENST00000553882 FAM218AQ96MZ4 157 aa10.18□□□□□ -0.78
ACTN1-211ENST00000553882 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
ACTN1-211ENST00000553882 F8WDY8 70 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 LINC00337Q8N6G1 96 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 SND1-IT1Q9HBX3 110 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 TRRAPQ9Y4A5 3859 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 SPATA3Q8NHX4 192 aa10.17□□□□□ -0.78
ACTN1-211ENST00000553882 CRPP02741 224 aa10.16□□□□□ -0.78
ACTN1-211ENST00000553882 XCL1P47992 114 aa10.16□□□□□ -0.78
ACTN1-211ENST00000553882 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
ACTN1-211ENST00000553882 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
ACTN1-211ENST00000553882 LINC00482Q8N8I6 264 aa10.16□□□□□ -0.78
ACTN1-211ENST00000553882 ANAPC13Q9BS18 74 aa10.16□□□□□ -0.78
ACTN1-211ENST00000553882 DEFB4AO15263 64 aa10.15□□□□□ -0.78
ACTN1-211ENST00000553882 ATRQ13535 2644 aa10.15□□□□□ -0.79
ACTN1-211ENST00000553882 A0A087WZ39 114 aa10.15□□□□□ -0.79
ACTN1-211ENST00000553882 LINC00959A0A1B0GUT2 108 aa10.15□□□□□ -0.79
ACTN1-211ENST00000553882 Q9HAA7 133 aa10.15□□□□□ -0.79
ACTN1-211ENST00000553882 TRAV13-2A0A0B4J235 113 aa10.13□□□□□ -0.79
ACTN1-211ENST00000553882 CCL18P55774 89 aa10.13□□□□□ -0.79
ACTN1-211ENST00000553882 X6R8D5 127 aa10.13□□□□□ -0.79
ACTN1-211ENST00000553882 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
ACTN1-211ENST00000553882 J3QKU1 62 aa10.12□□□□□ -0.79
ACTN1-211ENST00000553882 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms