RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 UBE2D2P62837 147 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 DEFB123Q8N688 67 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 DPH3P1Q9H4G8 78 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 WNK2Q9Y3S1 2297 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 TCHHQ07283 1943 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 BTAF1O14981 1849 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 XRN1Q8IZH2 1706 aaKnown RBP-0.16□□□□□ -2.43
LINC00648-201ENST00000553747 BSNQ9UPA5 3926 aa-0.16□□□□□ -2.43
LINC00648-201ENST00000553747 ABCA2Q9BZC7 2435 aa-0.16□□□□□ -2.43
LINC00648-201ENST00000553747 ZNF292O60281 2723 aa-0.16□□□□□ -2.43
LINC00648-201ENST00000553747 FLNCQ14315 2725 aa-0.16□□□□□ -2.43
LINC00648-201ENST00000553747 FAM24AA6NFZ4 105 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 F6UZH7 168 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 CHKB-CPT1BH3BT56 60 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 CORTO00230 105 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 SNAPC5O75971 98 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 PPP3R1P63098 170 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 WHAMMP3Q1A5X7 153 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 TMEM263Q8WUH6 116 aaKnown RBP-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 C2orf88Q9BSF0 95 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 NXT2Q9NPJ8 142 aaKnown RBP-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 NCOA3Q9Y6Q9 1424 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 PEG3Q9GZU2 1588 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 ADGRL2O95490 1459 aa-0.16□□□□□ -2.44
LINC00648-201ENST00000553747 LRP2P98164 4655 aa-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 A0A0G2JMZ2 1700 aa-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 FAM223AQ8IWN6 122 aa-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 TMEM203Q969S6 136 aa-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 FAIMQ9NVQ4 179 aa-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 DSTQ03001 7570 aaKnown RBP-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 TSC2P49815 1807 aa-0.17□□□□□ -2.44
LINC00648-201ENST00000553747 VWFP04275 2813 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 HECTD4Q9Y4D8 3996 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 SPTBN2O15020 2390 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 FXYD6-FXYD2A0A087WZ82 144 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 NAP1L6A6NFF2 107 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 PRM1P04553 51 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 COX6CP09669 75 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 IGLC1P0CG04 106 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 COX6B1P14854 86 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 GNG11P61952 73 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 Q0VG73 95 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 C10orf113Q5VZT2 155 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 SVBPQ8N300 66 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 POLA1P09884 1462 aaPredicted RBP-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 C1orf167Q5SNV9 1468 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 ZFYVE16Q7Z3T8 1539 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 ABCA3Q99758 1704 aa-0.18□□□□□ -2.44
LINC00648-201ENST00000553747 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
LINC00648-201ENST00000553747 TRBV7-4A0A0J9YYF1 115 aa-0.19□□□□□ -2.44
LINC00648-201ENST00000553747 H3BQ15 152 aa-0.19□□□□□ -2.44
LINC00648-201ENST00000553747 ARL2-SNX15V9GYD0 113 aa-0.19□□□□□ -2.44
LINC00648-201ENST00000553747 PKD1L1Q8TDX9 2849 aa-0.19□□□□□ -2.44
LINC00648-201ENST00000553747 LINC00587B1AMM8 73 aa-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 MRPS10P82664 201 aaKnown RBP-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 PRO1854Q9UHT4 67 aa-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 PIEZO2Q9H5I5 2752 aa-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 SETBP1Q9Y6X0 1596 aa-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 PI4KAP42356 2102 aa-0.2□□□□□ -2.44
LINC00648-201ENST00000553747 COL4A6Q14031 1691 aa-0.21□□□□□ -2.44
LINC00648-201ENST00000553747 LINC00959A0A1B0GUT2 108 aa-0.21□□□□□ -2.44
LINC00648-201ENST00000553747 K7EQZ3 153 aa-0.21□□□□□ -2.44
LINC00648-201ENST00000553747 PRO1933Q9H354 126 aa-0.21□□□□□ -2.44
LINC00648-201ENST00000553747 MANBALQ9NQG1 85 aa-0.21□□□□□ -2.44
LINC00648-201ENST00000553747 NSD1Q96L73 2696 aaPredicted RBP-0.21□□□□□ -2.44
LINC00648-201ENST00000553747 AKAP6Q13023 2319 aa-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 FAM223BA6NKX1 122 aa-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 SAA2P0DJI9 122 aaPredicted RBP-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 SPRR1BP22528 89 aa-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 S100A1P23297 94 aa-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 UBA52P62987 128 aaKnown RBP-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 LINC01600Q96MT4 127 aa-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 GNG8Q9UK08 70 aa-0.22□□□□□ -2.44
LINC00648-201ENST00000553747 PLEKHH2Q8IVE3 1493 aa-0.22□□□□□ -2.45
LINC00648-201ENST00000553747 PTPRQQ9UMZ3 2332 aa-0.22□□□□□ -2.45
LINC00648-201ENST00000553747 MUC2Q02817 5179 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 CRYM-AS1A6NIL9 109 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 TRAPPC2P0DI81 140 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 TRAPPC2BP0DI82 140 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 C12orf57Q99622 126 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 NCOR1O75376 2440 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 EDC4Q6P2E9 1401 aaKnown RBP-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 NLRP1Q9C000 1473 aa-0.23□□□□□ -2.45
LINC00648-201ENST00000553747 TARBP1Q13395 1621 aaKnown RBP-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 KIAA1551Q9HCM1 1747 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 A0A1B0GWA3 101 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 TMEM262E9PQX1 116 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 KRTDAPP60985 99 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 GTF2H5Q6ZYL4 71 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 LINC00846Q9NV44 126 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 PRDM15P57071 1507 aaPredicted RBP-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 SHPRHQ149N8 1683 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 PAPPA2Q9BXP8 1791 aa-0.24□□□□□ -2.45
LINC00648-201ENST00000553747 PTPN13Q12923 2485 aa-0.25□□□□□ -2.45
LINC00648-201ENST00000553747 CHD6Q8TD26 2715 aa-0.25□□□□□ -2.45
LINC00648-201ENST00000553747 SPRR2BP35325 72 aa-0.25□□□□□ -2.45
LINC00648-201ENST00000553747 ABCC5O15440 1437 aa-0.25□□□□□ -2.45
LINC00648-201ENST00000553747 CCDC141Q6ZP82 1450 aa-0.25□□□□□ -2.45
LINC00648-201ENST00000553747 HSD52Q0P140 79 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms