RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.62
ARHGEF40-202ENST00000553709 A0A0U1RQV1 116 aa11.21□□□□□ -0.62
ARHGEF40-202ENST00000553709 SVIPQ8NHG7 77 aa11.21□□□□□ -0.62
ARHGEF40-202ENST00000553709 B9D2Q9BPU9 175 aa11.21□□□□□ -0.62
ARHGEF40-202ENST00000553709 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
ARHGEF40-202ENST00000553709 CRIP2P52943 208 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF40-202ENST00000553709 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
ARHGEF40-202ENST00000553709 HILS1P60008 231 aa11.19□□□□□ -0.62
ARHGEF40-202ENST00000553709 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
ARHGEF40-202ENST00000553709 EDN2P20800 178 aa11.19□□□□□ -0.62
ARHGEF40-202ENST00000553709 COX8CQ7Z4L0 72 aa11.19□□□□□ -0.62
ARHGEF40-202ENST00000553709 H0Y9J4 135 aa11.19□□□□□ -0.62
ARHGEF40-202ENST00000553709 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 C20orf197Q8N268 126 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 UBE2D3P61077 147 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 UBE2D2P62837 147 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 CHKB-CPT1BH3BT56 60 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 POM121L12Q8N7R1 296 aa11.18□□□□□ -0.62
ARHGEF40-202ENST00000553709 SYCNQ0VAF6 134 aa11.17□□□□□ -0.62
ARHGEF40-202ENST00000553709 CDC42SE2Q9NRR3 84 aa11.17□□□□□ -0.62
ARHGEF40-202ENST00000553709 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
ARHGEF40-202ENST00000553709 FAM19A1Q7Z5A9 133 aa11.15□□□□□ -0.62
ARHGEF40-202ENST00000553709 SMIM11BQ8TCY0 68 aa11.15□□□□□ -0.62
ARHGEF40-202ENST00000553709 C3orf22Q8N5N4 141 aa11.15□□□□□ -0.63
ARHGEF40-202ENST00000553709 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 LELP1Q5T871 98 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 IGLV4-69A0A075B6H9 119 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 KIR2DL5BQ8NHK3 375 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 MPLKIPQ8TAP9 179 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
ARHGEF40-202ENST00000553709 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
ARHGEF40-202ENST00000553709 V9GYY9 64 aa11.13□□□□□ -0.63
ARHGEF40-202ENST00000553709 A0A096LNJ9 63 aa11.13□□□□□ -0.63
ARHGEF40-202ENST00000553709 A0A1W2PPR1 153 aa11.13□□□□□ -0.63
ARHGEF40-202ENST00000553709 Q6ZQY7 126 aa11.13□□□□□ -0.63
ARHGEF40-202ENST00000553709 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
ARHGEF40-202ENST00000553709 BRI3O95415 125 aa11.12□□□□□ -0.63
ARHGEF40-202ENST00000553709 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
ARHGEF40-202ENST00000553709 FAM19A5Q7Z5A7 132 aaPredicted RBP11.12□□□□□ -0.63
ARHGEF40-202ENST00000553709 CHD8Q9HCK8 2581 aa11.12□□□□□ -0.63
ARHGEF40-202ENST00000553709 CCKP06307 115 aa11.12□□□□□ -0.63
ARHGEF40-202ENST00000553709 XGP55808 180 aa11.12□□□□□ -0.63
ARHGEF40-202ENST00000553709 KPRPQ5T749 579 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF40-202ENST00000553709 Q8IZM0 81 aa11.11□□□□□ -0.63
ARHGEF40-202ENST00000553709 COX17Q14061 63 aa11.11□□□□□ -0.63
ARHGEF40-202ENST00000553709 MRPL55Q7Z7F7 128 aaKnown RBP11.1□□□□□ -0.63
ARHGEF40-202ENST00000553709 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
ARHGEF40-202ENST00000553709 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
ARHGEF40-202ENST00000553709 A0A096LNI7 61 aa11.1□□□□□ -0.63
ARHGEF40-202ENST00000553709 M0R378 163 aa11.1□□□□□ -0.63
ARHGEF40-202ENST00000553709 FAM236DA0A1B0GTK5 79 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 FAM236CP0DP71 79 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 M0QXV9 152 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 TSPEAR-AS2P59090 65 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 A0A087WZ39 114 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 NDUFA7O95182 113 aa11.09□□□□□ -0.63
ARHGEF40-202ENST00000553709 IGLV2-18A0A075B6J9 118 aa11.08□□□□□ -0.64
ARHGEF40-202ENST00000553709 IGKV2-28A0A075B6P5 120 aa11.08□□□□□ -0.64
ARHGEF40-202ENST00000553709 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.64
ARHGEF40-202ENST00000553709 IGKV2D-28P01615 120 aa11.08□□□□□ -0.64
ARHGEF40-202ENST00000553709 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
ARHGEF40-202ENST00000553709 ZNF580Q9UK33 172 aa11.08□□□□□ -0.64
ARHGEF40-202ENST00000553709 USP17L23D6RBM5 183 aa11.07□□□□□ -0.64
ARHGEF40-202ENST00000553709 MUC7Q8TAX7 377 aa11.07□□□□□ -0.64
ARHGEF40-202ENST00000553709 SERP2Q8N6R1 65 aa11.06□□□□□ -0.64
ARHGEF40-202ENST00000553709 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
ARHGEF40-202ENST00000553709 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF40-202ENST00000553709 KRTAP10-9P60411 292 aa11.05□□□□□ -0.64
ARHGEF40-202ENST00000553709 AMELXQ99217 191 aa11.05□□□□□ -0.64
ARHGEF40-202ENST00000553709 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF40-202ENST00000553709 IGKV4-1P06312 121 aa11.05□□□□□ -0.64
ARHGEF40-202ENST00000553709 DHRS4-AS1Q9P1J3 65 aa11.05□□□□□ -0.64
ARHGEF40-202ENST00000553709 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF40-202ENST00000553709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF40-202ENST00000553709 CYSRT1A8MQ03 144 aa11.04□□□□□ -0.64
ARHGEF40-202ENST00000553709 IGLV1-51P01701 117 aa11.04□□□□□ -0.64
ARHGEF40-202ENST00000553709 COX6A2Q02221 97 aa11.04□□□□□ -0.64
ARHGEF40-202ENST00000553709 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
ARHGEF40-202ENST00000553709 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
ARHGEF40-202ENST00000553709 FAM240AA0A1B0GVK7 77 aa11.03□□□□□ -0.64
ARHGEF40-202ENST00000553709 CSDC2Q9Y534 153 aaKnown RBP11.02□□□□□ -0.65
ARHGEF40-202ENST00000553709 ADAMTSL4-AS1Q5T5F5 129 aa11.01□□□□□ -0.65
ARHGEF40-202ENST00000553709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF40-202ENST00000553709 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
ARHGEF40-202ENST00000553709 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
ARHGEF40-202ENST00000553709 RPL28P46779 137 aaKnown RBP11□□□□□ -0.65
ARHGEF40-202ENST00000553709 BEAN1Q3B7T3 259 aa11□□□□□ -0.65
ARHGEF40-202ENST00000553709 IGLV4-60A0A075B6I1 120 aa11□□□□□ -0.65
ARHGEF40-202ENST00000553709 COX7CP15954 63 aa11□□□□□ -0.65
ARHGEF40-202ENST00000553709 Q6JHZ5 121 aa11□□□□□ -0.65
ARHGEF40-202ENST00000553709 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
ARHGEF40-202ENST00000553709 Q6Q795 121 aa10.99□□□□□ -0.65
ARHGEF40-202ENST00000553709 WFDC10BQ8IUB3 73 aa10.99□□□□□ -0.65
ARHGEF40-202ENST00000553709 USP9XQ93008 2570 aaPredicted RBP10.99□□□□□ -0.65
ARHGEF40-202ENST00000553709 FHL2Q14192 279 aa10.98□□□□□ -0.65
ARHGEF40-202ENST00000553709 HRCT1Q6UXD1 115 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms