RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PPDPFLQ8WWR9 84 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 SIGMAR1Q99720 223 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 COL6A5A8TX70 2615 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 TRGV2A0A075B6R0 118 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 UBE2L6O14933 153 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 COX6CP09669 75 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 HERV-K104P63124 156 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 NTM-AS1Q6ZSK4 140 aa9.19□□□□□ -0.94
SHMT2-205ENST00000553474 FBN1P35555 2871 aaKnown RBP9.18□□□□□ -0.94
SHMT2-205ENST00000553474 Q1RN00 199 aa9.18□□□□□ -0.94
SHMT2-205ENST00000553474 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
SHMT2-205ENST00000553474 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
SHMT2-205ENST00000553474 LINC00694P0DN24 101 aa9.17□□□□□ -0.94
SHMT2-205ENST00000553474 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
SHMT2-205ENST00000553474 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE4Q13068 117 aa9.17□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE5Q13069 117 aa9.17□□□□□ -0.94
SHMT2-205ENST00000553474 SLC25A20O43772 301 aa9.16□□□□□ -0.94
SHMT2-205ENST00000553474 KRTAP10-3P60369 221 aa9.16□□□□□ -0.94
SHMT2-205ENST00000553474 COX6A2Q02221 97 aa9.16□□□□□ -0.94
SHMT2-205ENST00000553474 KIR2DL5BQ8NHK3 375 aa9.16□□□□□ -0.94
SHMT2-205ENST00000553474 TRGV4A0A0C4DH28 118 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE7O76087 117 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE12FP0CL80 117 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE12GP0CL81 117 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE12IP0CL82 117 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
SHMT2-205ENST00000553474 INSL3P51460 131 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
SHMT2-205ENST00000553474 CKS1BP61024 79 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 C3orf56Q8N813 242 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 Q9H8V8 135 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 TRAV13-1A0A0B4J241 112 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 SMIM9A6NGZ8 99 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 A8MZ25 164 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 F5H768 121 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 TRIAP1O43715 76 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-205ENST00000553474 MDFIQ99750 246 aa9.14□□□□□ -0.95
SHMT2-205ENST00000553474 C9JAW5 83 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 TMEM262E9PQX1 116 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 PF4P02776 101 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 FHL2Q14192 279 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 WFDC10AQ9H1F0 79 aa9.13□□□□□ -0.95
SHMT2-205ENST00000553474 TRBV6-8A0A0A6YYG3 113 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 H7C2G1 150 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 LINC00612Q8N6U2 182 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 WIPF1O43516 503 aa9.12□□□□□ -0.95
SHMT2-205ENST00000553474 H3BT86 120 aa9.1□□□□□ -0.95
SHMT2-205ENST00000553474 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
SHMT2-205ENST00000553474 NOTCH3Q9UM47 2321 aa9.1□□□□□ -0.95
SHMT2-205ENST00000553474 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
SHMT2-205ENST00000553474 LST1O00453 97 aa9.09□□□□□ -0.95
SHMT2-205ENST00000553474 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
SHMT2-205ENST00000553474 C9orf66Q5T8R8 295 aa9.08□□□□□ -0.96
SHMT2-205ENST00000553474 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
SHMT2-205ENST00000553474 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
SHMT2-205ENST00000553474 LOC100131303A0A0U1RQF7 123 aa9.07□□□□□ -0.96
SHMT2-205ENST00000553474 A0A1B0GUV1 79 aa9.07□□□□□ -0.96
SHMT2-205ENST00000553474 NPC2P61916 151 aa9.07□□□□□ -0.96
SHMT2-205ENST00000553474 COX7B2Q8TF08 81 aa9.07□□□□□ -0.96
SHMT2-205ENST00000553474 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
SHMT2-205ENST00000553474 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
SHMT2-205ENST00000553474 DAND5Q8N907 189 aa9.06□□□□□ -0.96
SHMT2-205ENST00000553474 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
SHMT2-205ENST00000553474 A0A087WZ39 114 aa9.05□□□□□ -0.96
SHMT2-205ENST00000553474 IGHV3OR16-9A0A0B4J2B5 98 aa9.05□□□□□ -0.96
SHMT2-205ENST00000553474 GAGE6Q13070 117 aa9.05□□□□□ -0.96
SHMT2-205ENST00000553474 PRO0255Q9UI72 69 aa9.05□□□□□ -0.96
SHMT2-205ENST00000553474 COX7A2LO14548 114 aa9.04□□□□□ -0.96
SHMT2-205ENST00000553474 C2orf82Q6UX34 121 aa9.04□□□□□ -0.96
SHMT2-205ENST00000553474 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
SHMT2-205ENST00000553474 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
SHMT2-205ENST00000553474 UBE2WQ96B02 151 aa9.04□□□□□ -0.96
SHMT2-205ENST00000553474 X6R8D5 127 aa9.04□□□□□ -0.96
SHMT2-205ENST00000553474 IGLV4-60A0A075B6I1 120 aa9.03□□□□□ -0.96
SHMT2-205ENST00000553474 IBA57-AS1B1ANH7 110 aa9.03□□□□□ -0.96
SHMT2-205ENST00000553474 DEFB130BP0DP73 79 aa9.03□□□□□ -0.96
SHMT2-205ENST00000553474 DEFB130AP0DP74 79 aa9.03□□□□□ -0.96
SHMT2-205ENST00000553474 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-205ENST00000553474 APOC4P55056 127 aa9.02□□□□□ -0.97
SHMT2-205ENST00000553474 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
SHMT2-205ENST00000553474 GYPEP15421 78 aa9.01□□□□□ -0.97
SHMT2-205ENST00000553474 VWFP04275 2813 aa9.01□□□□□ -0.97
SHMT2-205ENST00000553474 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
SHMT2-205ENST00000553474 TRACP01848 142 aa9.01□□□□□ -0.97
SHMT2-205ENST00000553474 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
SHMT2-205ENST00000553474 DEFB121Q5J5C9 76 aa9.01□□□□□ -0.97
SHMT2-205ENST00000553474 FAM240AA0A1B0GVK7 77 aa9□□□□□ -0.97
SHMT2-205ENST00000553474 F8WDY8 70 aa9□□□□□ -0.97
SHMT2-205ENST00000553474 SS18Q15532 418 aa9□□□□□ -0.97
SHMT2-205ENST00000553474 CLEC2BQ92478 149 aa9□□□□□ -0.97
SHMT2-205ENST00000553474 SS18L2Q9UHA2 77 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms