RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 TRBV6-4A0A1B0GX49 114 aa13.17□□□□□ -0.3
LRP1-204ENST00000553277 LINC00612Q8N6U2 182 aa13.17□□□□□ -0.3
LRP1-204ENST00000553277 NOP10Q9NPE3 64 aaKnown RBP13.16□□□□□ -0.3
LRP1-204ENST00000553277 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
LRP1-204ENST00000553277 IGHV3-33P01772 117 aa13.15□□□□□ -0.3
LRP1-204ENST00000553277 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
LRP1-204ENST00000553277 LOC107984156A0A0G2JMH3 177 aa13.15□□□□□ -0.31
LRP1-204ENST00000553277 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.31
LRP1-204ENST00000553277 IFITM1P13164 125 aa13.15□□□□□ -0.31
LRP1-204ENST00000553277 ARL17AQ8IVW1 177 aa13.15□□□□□ -0.31
LRP1-204ENST00000553277 TM2D3Q9BRN9 247 aa13.15□□□□□ -0.31
LRP1-204ENST00000553277 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
LRP1-204ENST00000553277 NDUFA1O15239 70 aa13.14□□□□□ -0.31
LRP1-204ENST00000553277 MIAQ16674 131 aa13.14□□□□□ -0.31
LRP1-204ENST00000553277 NTM-AS1Q6ZSK4 140 aa13.14□□□□□ -0.31
LRP1-204ENST00000553277 SPINK8P0C7L1 97 aa13.13□□□□□ -0.31
LRP1-204ENST00000553277 CDKN2A-AS1Q9UH64 79 aa13.13□□□□□ -0.31
LRP1-204ENST00000553277 ERG28Q9UKR5 140 aa13.13□□□□□ -0.31
LRP1-204ENST00000553277 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
LRP1-204ENST00000553277 LYRM9A8MSI8 78 aa13.12□□□□□ -0.31
LRP1-204ENST00000553277 M0QXV9 152 aa13.12□□□□□ -0.31
LRP1-204ENST00000553277 PSMB2P49721 201 aa13.12□□□□□ -0.31
LRP1-204ENST00000553277 LINC00242Q5T6M2 205 aa13.12□□□□□ -0.31
LRP1-204ENST00000553277 DEFB121Q5J5C9 76 aa13.12□□□□□ -0.31
LRP1-204ENST00000553277 CDC42SE2Q9NRR3 84 aa13.12□□□□□ -0.31
LRP1-204ENST00000553277 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
LRP1-204ENST00000553277 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
LRP1-204ENST00000553277 ETDBQ3ZM63 59 aa13.11□□□□□ -0.31
LRP1-204ENST00000553277 TMEM101Q96IK0 257 aa13.11□□□□□ -0.31
LRP1-204ENST00000553277 TMEM243Q9BU79 118 aa13.11□□□□□ -0.31
LRP1-204ENST00000553277 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
LRP1-204ENST00000553277 LINC00694P0DN24 101 aa13.1□□□□□ -0.31
LRP1-204ENST00000553277 GAGE4Q13068 117 aa13.1□□□□□ -0.31
LRP1-204ENST00000553277 GAGE5Q13069 117 aa13.1□□□□□ -0.31
LRP1-204ENST00000553277 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
LRP1-204ENST00000553277 TCL1BO95988 128 aa13.09□□□□□ -0.31
LRP1-204ENST00000553277 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
LRP1-204ENST00000553277 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
LRP1-204ENST00000553277 RETNQ9HD89 108 aa13.09□□□□□ -0.31
LRP1-204ENST00000553277 GAGE7O76087 117 aa13.08□□□□□ -0.31
LRP1-204ENST00000553277 GAGE12FP0CL80 117 aa13.08□□□□□ -0.31
LRP1-204ENST00000553277 GAGE12GP0CL81 117 aa13.08□□□□□ -0.31
LRP1-204ENST00000553277 GAGE12IP0CL82 117 aa13.08□□□□□ -0.31
LRP1-204ENST00000553277 CIRBPQ14011 172 aaKnown RBP13.08□□□□□ -0.31
LRP1-204ENST00000553277 TRBV30A0A0K0K1B3 111 aa13.08□□□□□ -0.32
LRP1-204ENST00000553277 SCGB1C2P0DMR2 95 aa13.08□□□□□ -0.32
LRP1-204ENST00000553277 SMCPP49901 116 aaPredicted RBP13.08□□□□□ -0.32
LRP1-204ENST00000553277 COX6A2Q02221 97 aa13.08□□□□□ -0.32
LRP1-204ENST00000553277 ADAMTSL4-AS1Q5T5F5 129 aa13.08□□□□□ -0.32
LRP1-204ENST00000553277 FAM222AQ5U5X8 452 aa13.08□□□□□ -0.32
LRP1-204ENST00000553277 COPS9Q8WXC6 57 aa13.08□□□□□ -0.32
LRP1-204ENST00000553277 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
LRP1-204ENST00000553277 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
LRP1-204ENST00000553277 UBE2L6O14933 153 aa13.06□□□□□ -0.32
LRP1-204ENST00000553277 FHL2Q14192 279 aa13.06□□□□□ -0.32
LRP1-204ENST00000553277 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
LRP1-204ENST00000553277 B9D2Q9BPU9 175 aa13.06□□□□□ -0.32
LRP1-204ENST00000553277 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
LRP1-204ENST00000553277 PRSS2P07478 247 aa13.05□□□□□ -0.32
LRP1-204ENST00000553277 SMIM1B2RUZ4 78 aa13.05□□□□□ -0.32
LRP1-204ENST00000553277 DEFB4AO15263 64 aa13.05□□□□□ -0.32
LRP1-204ENST00000553277 SPART-AS1P0CW21 52 aa13.05□□□□□ -0.32
LRP1-204ENST00000553277 MEGF8Q7Z7M0 2845 aa13.04□□□□□ -0.32
LRP1-204ENST00000553277 F5H768 121 aa13.04□□□□□ -0.32
LRP1-204ENST00000553277 HERV-K104P63124 156 aa13.04□□□□□ -0.32
LRP1-204ENST00000553277 FOXI1Q12951 378 aa13.03□□□□□ -0.32
LRP1-204ENST00000553277 TEN1Q86WV5 123 aa13.03□□□□□ -0.32
LRP1-204ENST00000553277 CELA1Q9UNI1 258 aa13.03□□□□□ -0.32
LRP1-204ENST00000553277 DEFB130BP0DP73 79 aa13.02□□□□□ -0.32
LRP1-204ENST00000553277 DEFB130AP0DP74 79 aa13.02□□□□□ -0.32
LRP1-204ENST00000553277 SFTA2Q6UW10 78 aa13.02□□□□□ -0.32
LRP1-204ENST00000553277 ATXN8Q156A1 80 aa13.02□□□□□ -0.33
LRP1-204ENST00000553277 PPDPFLQ8WWR9 84 aa13.02□□□□□ -0.33
LRP1-204ENST00000553277 TRAV13-1A0A0B4J241 112 aa13.01□□□□□ -0.33
LRP1-204ENST00000553277 MTURNQ8N3F0 131 aa13.01□□□□□ -0.33
LRP1-204ENST00000553277 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
LRP1-204ENST00000553277 Q9H8V8 135 aa13.01□□□□□ -0.33
LRP1-204ENST00000553277 TRBV6-8A0A0A6YYG3 113 aa13□□□□□ -0.33
LRP1-204ENST00000553277 Q1RN00 199 aa13□□□□□ -0.33
LRP1-204ENST00000553277 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
LRP1-204ENST00000553277 DAD1P61803 113 aa12.99□□□□□ -0.33
LRP1-204ENST00000553277 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
LRP1-204ENST00000553277 COX6CP09669 75 aa12.99□□□□□ -0.33
LRP1-204ENST00000553277 LOC100131303A0A0U1RQF7 123 aa12.98□□□□□ -0.33
LRP1-204ENST00000553277 LINC00308Q8TCZ7 52 aa12.98□□□□□ -0.33
LRP1-204ENST00000553277 ICOSQ9Y6W8 199 aa12.98□□□□□ -0.33
LRP1-204ENST00000553277 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
LRP1-204ENST00000553277 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
LRP1-204ENST00000553277 TRIAP1O43715 76 aa12.97□□□□□ -0.33
LRP1-204ENST00000553277 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
LRP1-204ENST00000553277 SCGB1A1P11684 91 aa12.97□□□□□ -0.33
LRP1-204ENST00000553277 SIGMAR1Q99720 223 aa12.97□□□□□ -0.33
LRP1-204ENST00000553277 SLC25A20O43772 301 aa12.96□□□□□ -0.33
LRP1-204ENST00000553277 H7C2G1 150 aa12.96□□□□□ -0.34
LRP1-204ENST00000553277 ATP5G1P05496 136 aa12.96□□□□□ -0.34
LRP1-204ENST00000553277 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
LRP1-204ENST00000553277 LINC01620Q4KN68 170 aa12.95□□□□□ -0.34
LRP1-204ENST00000553277 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
LRP1-204ENST00000553277 PRO0255Q9UI72 69 aa12.94□□□□□ -0.34
LRP1-204ENST00000553277 DNAH9Q9NYC9 4486 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms