RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 LELP1Q5T871 98 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 NBEAL1Q6ZS30 2694 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 COL5A1-AS1Q5SY13 56 aa6.77□□□□□ -1.33
TMEM116-216ENST00000552800 PPDPFQ9H3Y8 114 aa6.77□□□□□ -1.33
TMEM116-216ENST00000552800 SPANXB1Q9NS25 103 aaPredicted RBP6.77□□□□□ -1.33
TMEM116-216ENST00000552800 TP73-AS1Q9UF72 201 aa6.77□□□□□ -1.33
TMEM116-216ENST00000552800 F5H768 121 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 J3QQQ9 107 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 UBE2L6O14933 153 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 DEFB4AO15263 64 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 MPV17L2Q567V2 206 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 TMEM170BQ5T4T1 132 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 ICOSQ9Y6W8 199 aa6.76□□□□□ -1.33
TMEM116-216ENST00000552800 IGLV4-60A0A075B6I1 120 aa6.75□□□□□ -1.33
TMEM116-216ENST00000552800 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
TMEM116-216ENST00000552800 H3BRM9 83 aa6.75□□□□□ -1.33
TMEM116-216ENST00000552800 COX6A2Q02221 97 aa6.75□□□□□ -1.33
TMEM116-216ENST00000552800 AMMECR1LQ6DCA0 310 aa6.75□□□□□ -1.33
TMEM116-216ENST00000552800 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
TMEM116-216ENST00000552800 TRAV8-6A0A0B4J262 113 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 A0A0J9YY99 117 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 TIMM17BO60830 172 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 IGHV3-30-3P0DP02 117 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 RBX1P62877 108 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 Q6ZVH6 145 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 ORAOV1Q8WV07 137 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 GEMIN7Q9H840 131 aaKnown RBP6.74□□□□□ -1.33
TMEM116-216ENST00000552800 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 NOTCH1P46531 2555 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
TMEM116-216ENST00000552800 MGAM2Q2M2H8 2515 aa6.74□□□□□ -1.33
TMEM116-216ENST00000552800 A0A087WZ39 114 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 A0A0J9YWU9 116 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 A0A1B0GWB2 263 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 C11orf45Q8TAV5 145 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 CHCHD5Q9BSY4 110 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 TTTY13Q9BZ97 58 aa6.73□□□□□ -1.33
TMEM116-216ENST00000552800 A0A0J9YXY3 114 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 LINC00959A0A1B0GUT2 108 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 HINT1P49773 126 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-216ENST00000552800 GAGE6Q13070 117 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 Q6ZTC4 211 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 CEND1Q8N111 149 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 B9D2Q9BPU9 175 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 RETNQ9HD89 108 aa6.72□□□□□ -1.33
TMEM116-216ENST00000552800 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.34
TMEM116-216ENST00000552800 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-216ENST00000552800 SFTA2Q6UW10 78 aa6.71□□□□□ -1.34
TMEM116-216ENST00000552800 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
TMEM116-216ENST00000552800 C15orf53Q8NAA6 179 aa6.71□□□□□ -1.34
TMEM116-216ENST00000552800 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 TRAV10A0A0B4J240 114 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 A6NDN8 102 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 NDUFA1O15239 70 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 LGALS3P17931 250 aaKnown RBP6.7□□□□□ -1.34
TMEM116-216ENST00000552800 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
TMEM116-216ENST00000552800 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
TMEM116-216ENST00000552800 LITAFQ99732 161 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
TMEM116-216ENST00000552800 DEFB131BA0A096LNP1 70 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 TRAV8-3A0A0A6YYJ7 113 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 TRAV8-4A0A0B4J246 113 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 HERV-K104P63124 156 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 CD164L2Q6UWJ8 174 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 SPANXDQ9BXN6 97 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
TMEM116-216ENST00000552800 TRAV13-1A0A0B4J241 112 aa6.68□□□□□ -1.34
TMEM116-216ENST00000552800 SS18Q15532 418 aa6.68□□□□□ -1.34
TMEM116-216ENST00000552800 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
TMEM116-216ENST00000552800 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 K7EP13 123 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 SPINK8P0C7L1 97 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 IFITM1P13164 125 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 FXYD2P54710 66 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
TMEM116-216ENST00000552800 REG3AQ06141 175 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 ESRGQ1W209 222 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 DEFB121Q5J5C9 76 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
TMEM116-216ENST00000552800 TMEM238C9JI98 176 aa6.66□□□□□ -1.34
TMEM116-216ENST00000552800 DNAH10OSP0CZ25 163 aa6.66□□□□□ -1.34
TMEM116-216ENST00000552800 TCTAP57738 103 aa6.66□□□□□ -1.34
TMEM116-216ENST00000552800 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
TMEM116-216ENST00000552800 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
TMEM116-216ENST00000552800 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
TMEM116-216ENST00000552800 DYNC2H1Q8NCM8 4307 aaKnown RBP6.65□□□□□ -1.34
TMEM116-216ENST00000552800 LOC107984156A0A0G2JMH3 177 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms