RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 J3QKU1 62 aa16.84■□□□□ 0.29
NPAS3-211ENST00000551634 Q6ZTI0 123 aa16.84■□□□□ 0.29
NPAS3-211ENST00000551634 TMEM86BQ8N661 226 aa16.84■□□□□ 0.29
NPAS3-211ENST00000551634 A0A0U1RRA0 63 aa16.83■□□□□ 0.28
NPAS3-211ENST00000551634 ACYP1P07311 99 aa16.83■□□□□ 0.28
NPAS3-211ENST00000551634 TRACP01848 142 aa16.82■□□□□ 0.28
NPAS3-211ENST00000551634 ACANP16112 2415 aa16.81■□□□□ 0.28
NPAS3-211ENST00000551634 LRRC75A-AS1Q8N1F1 130 aa16.81■□□□□ 0.28
NPAS3-211ENST00000551634 GAGE12JA6NER3 117 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 GAGE7O76087 117 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 GAGE12FP0CL80 117 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 GAGE12GP0CL81 117 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 GAGE12IP0CL82 117 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 GAGE4Q13068 117 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 TEP1Q99973 2627 aaKnown RBP16.8■□□□□ 0.28
NPAS3-211ENST00000551634 TMEM243Q9BU79 118 aa16.8■□□□□ 0.28
NPAS3-211ENST00000551634 DEFB113Q30KQ7 82 aa16.79■□□□□ 0.28
NPAS3-211ENST00000551634 UBE2L6O14933 153 aa16.78■□□□□ 0.28
NPAS3-211ENST00000551634 PF4P02776 101 aa16.78■□□□□ 0.28
NPAS3-211ENST00000551634 MYO9AB2RTY4 2548 aa16.78■□□□□ 0.28
NPAS3-211ENST00000551634 TRBV7-7A0A0K0K1E9 115 aa16.78■□□□□ 0.28
NPAS3-211ENST00000551634 B5MCH6 92 aa16.76■□□□□ 0.27
NPAS3-211ENST00000551634 CMC4P56277 68 aaPredicted RBP16.76■□□□□ 0.27
NPAS3-211ENST00000551634 Q96MF0 132 aa16.76■□□□□ 0.27
NPAS3-211ENST00000551634 HIST2H2BDQ6DRA6 164 aa16.76■□□□□ 0.27
NPAS3-211ENST00000551634 NOP10Q9NPE3 64 aaKnown RBP16.76■□□□□ 0.27
NPAS3-211ENST00000551634 CCL24O00175 119 aa16.75■□□□□ 0.27
NPAS3-211ENST00000551634 FAM222AQ5U5X8 452 aa16.75■□□□□ 0.27
NPAS3-211ENST00000551634 TRAV13-2A0A0B4J235 113 aa16.75■□□□□ 0.27
NPAS3-211ENST00000551634 MTORP42345 2549 aa16.74■□□□□ 0.27
NPAS3-211ENST00000551634 KRTAP10-9P60411 292 aa16.74■□□□□ 0.27
NPAS3-211ENST00000551634 C16orf74Q96GX8 76 aa16.73■□□□□ 0.27
NPAS3-211ENST00000551634 IMUPQ9GZP8 106 aa16.73■□□□□ 0.27
NPAS3-211ENST00000551634 TRBV6-4A0A1B0GX49 114 aa16.72■□□□□ 0.27
NPAS3-211ENST00000551634 BAALC-AS2P0C853 105 aa16.72■□□□□ 0.27
NPAS3-211ENST00000551634 CCDC179H3BU77 68 aa16.71■□□□□ 0.27
NPAS3-211ENST00000551634 RPL28P46779 137 aaKnown RBP16.71■□□□□ 0.27
NPAS3-211ENST00000551634 COX7B2Q8TF08 81 aa16.71■□□□□ 0.27
NPAS3-211ENST00000551634 AKAP9Q99996 3911 aa16.71■□□□□ 0.27
NPAS3-211ENST00000551634 SS18L2Q9UHA2 77 aa16.7■□□□□ 0.26
NPAS3-211ENST00000551634 ITPR3Q14573 2671 aa16.7■□□□□ 0.26
NPAS3-211ENST00000551634 PLAC8L1A1L4L8 177 aa16.69■□□□□ 0.26
NPAS3-211ENST00000551634 GIG44P09565 113 aaPredicted RBP16.69■□□□□ 0.26
NPAS3-211ENST00000551634 OTOGQ6ZRI0 2925 aa16.69■□□□□ 0.26
NPAS3-211ENST00000551634 TRGV2A0A075B6R0 118 aa16.69■□□□□ 0.26
NPAS3-211ENST00000551634 A0A1W2PRX2 142 aa16.69■□□□□ 0.26
NPAS3-211ENST00000551634 CRPP02741 224 aa16.68■□□□□ 0.26
NPAS3-211ENST00000551634 OVOL2Q9BRP0 275 aa16.68■□□□□ 0.26
NPAS3-211ENST00000551634 DNAJC9-AS1A6NH13 148 aa16.67■□□□□ 0.26
NPAS3-211ENST00000551634 FAM218AQ96MZ4 157 aa16.67■□□□□ 0.26
NPAS3-211ENST00000551634 FAM110AQ9BQ89 295 aa16.67■□□□□ 0.26
NPAS3-211ENST00000551634 LINC00643Q86TS7 51 aa16.67■□□□□ 0.26
NPAS3-211ENST00000551634 PDZD2O15018 2839 aa16.66■□□□□ 0.26
NPAS3-211ENST00000551634 MIR7-3HGQ8N6C7 128 aa16.66■□□□□ 0.26
NPAS3-211ENST00000551634 SDIM1Q6ZPB5 146 aa16.66■□□□□ 0.26
NPAS3-211ENST00000551634 C11orf44Q8N8P7 122 aa16.66■□□□□ 0.26
NPAS3-211ENST00000551634 C22orf24Q9Y442 160 aa16.66■□□□□ 0.26
NPAS3-211ENST00000551634 CUBNO60494 3623 aa16.65■□□□□ 0.26
NPAS3-211ENST00000551634 INAFM2P0DMQ5 153 aa16.65■□□□□ 0.26
NPAS3-211ENST00000551634 SND1-IT1Q9HBX3 110 aa16.65■□□□□ 0.26
NPAS3-211ENST00000551634 SONP18583 2426 aaKnown RBP16.64■□□□□ 0.25
NPAS3-211ENST00000551634 LOC100131303A0A0U1RQF7 123 aa16.64■□□□□ 0.25
NPAS3-211ENST00000551634 FLNAP21333 2647 aaKnown RBP16.64■□□□□ 0.25
NPAS3-211ENST00000551634 KRTAP1-3Q8IUG1 177 aa16.63■□□□□ 0.25
NPAS3-211ENST00000551634 LINC00337Q8N6G1 96 aa16.63■□□□□ 0.25
NPAS3-211ENST00000551634 TRGV4A0A0C4DH28 118 aa16.63■□□□□ 0.25
NPAS3-211ENST00000551634 IGKV2-28A0A075B6P5 120 aa16.62■□□□□ 0.25
NPAS3-211ENST00000551634 IGKV2D-28P01615 120 aa16.62■□□□□ 0.25
NPAS3-211ENST00000551634 IGHV3OR16-9A0A0B4J2B5 98 aa16.62■□□□□ 0.25
NPAS3-211ENST00000551634 TRBV6-8A0A0A6YYG3 113 aa16.61■□□□□ 0.25
NPAS3-211ENST00000551634 TOMM7Q9P0U1 55 aa16.61■□□□□ 0.25
NPAS3-211ENST00000551634 IBA57-AS1B1ANH7 110 aa16.61■□□□□ 0.25
NPAS3-211ENST00000551634 MALP21145 153 aa16.61■□□□□ 0.25
NPAS3-211ENST00000551634 SMCR5Q8TEV8 140 aa16.61■□□□□ 0.25
NPAS3-211ENST00000551634 CSNK1G2-AS1Q8NCQ2 148 aa16.6■□□□□ 0.25
NPAS3-211ENST00000551634 WNK1Q9H4A3 2382 aa16.6■□□□□ 0.25
NPAS3-211ENST00000551634 NIPBLQ6KC79 2804 aaeCLIP16.6■□□□□ 0.25
NPAS3-211ENST00000551634 CYSRT1A8MQ03 144 aa16.6■□□□□ 0.25
NPAS3-211ENST00000551634 LINC00158P58513 81 aa16.6■□□□□ 0.25
NPAS3-211ENST00000551634 C19orf73Q9NVV2 129 aa16.59■□□□□ 0.25
NPAS3-211ENST00000551634 IGLV4-60A0A075B6I1 120 aa16.59■□□□□ 0.25
NPAS3-211ENST00000551634 A0A087WZ39 114 aa16.59■□□□□ 0.25
NPAS3-211ENST00000551634 CHCHD5Q9BSY4 110 aa16.59■□□□□ 0.25
NPAS3-211ENST00000551634 H0YGX0 51 aa16.58■□□□□ 0.25
NPAS3-211ENST00000551634 FHL2Q14192 279 aa16.58■□□□□ 0.24
NPAS3-211ENST00000551634 RPL35AP18077 110 aaKnown RBP16.57■□□□□ 0.24
NPAS3-211ENST00000551634 CCL18P55774 89 aa16.57■□□□□ 0.24
NPAS3-211ENST00000551634 IGLV1-51P01701 117 aa16.57■□□□□ 0.24
NPAS3-211ENST00000551634 ESM1Q9NQ30 184 aa16.57■□□□□ 0.24
NPAS3-211ENST00000551634 SMIM11BQ8TCY0 68 aa16.56■□□□□ 0.24
NPAS3-211ENST00000551634 Q9HAA7 133 aa16.56■□□□□ 0.24
NPAS3-211ENST00000551634 IGKV3OR2-268A0A0C4DH90 116 aa16.55■□□□□ 0.24
NPAS3-211ENST00000551634 DNAL4O96015 105 aa16.55■□□□□ 0.24
NPAS3-211ENST00000551634 WFDC10AQ9H1F0 79 aa16.55■□□□□ 0.24
NPAS3-211ENST00000551634 FAM236AA0A1B0GUQ0 79 aa16.55■□□□□ 0.24
NPAS3-211ENST00000551634 FAM236BA0A1B0GV22 79 aa16.55■□□□□ 0.24
NPAS3-211ENST00000551634 CXCL5P42830 114 aa16.54■□□□□ 0.24
NPAS3-211ENST00000551634 C2CD3Q4AC94 2353 aa16.54■□□□□ 0.24
NPAS3-211ENST00000551634 ATP5G1P05496 136 aa16.52■□□□□ 0.24
NPAS3-211ENST00000551634 C16orf95Q9H693 158 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms