RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 DEFB123Q8N688 67 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.69□□□□□ -2.52
GPN3-209ENST00000551079 SPANXDQ9BXN6 97 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 FAM107BQ9H098 131 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 RAPGEF6Q8TEU7 1601 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 PCNX1Q96RV3 2341 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 HMGXB3Q12766 1538 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 TULP4Q9NRJ4 1543 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 SFT2D2O95562 160 aa-0.7□□□□□ -2.52
GPN3-209ENST00000551079 NBASA2RRP1 2371 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 LINC00959A0A1B0GUT2 108 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 CHKB-CPT1BH3BT56 60 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 SELENOWP63302 87 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 C10orf113Q5VZT2 155 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 MYOZ3Q8TDC0 251 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 COPS9Q8WXC6 57 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 NAA60Q9H7X0 242 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 TGP01266 2768 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 KIAA0556O60303 1618 aa-0.71□□□□□ -2.52
GPN3-209ENST00000551079 APOC3P02656 99 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 IGLC1P0CG04 106 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 TPPP2P59282 170 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 Q56UQ5 140 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 MRPL54Q6P161 138 aaKnown RBP-0.72□□□□□ -2.52
GPN3-209ENST00000551079 SFTA2Q6UW10 78 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 COMMD6Q7Z4G1 85 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 C5orf38Q86SI9 138 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 FAM223AQ8IWN6 122 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 SPRR4Q96PI1 79 aa-0.72□□□□□ -2.52
GPN3-209ENST00000551079 ANKRD36A6QL64 1941 aa-0.72□□□□□ -2.53
GPN3-209ENST00000551079 KNL1Q8NG31 2342 aa-0.72□□□□□ -2.53
GPN3-209ENST00000551079 MARF1Q9Y4F3 1742 aaKnown RBP-0.72□□□□□ -2.53
GPN3-209ENST00000551079 POLA1P09884 1462 aaPredicted RBP-0.73□□□□□ -2.53
GPN3-209ENST00000551079 GAPVD1Q14C86 1478 aa-0.73□□□□□ -2.53
GPN3-209ENST00000551079 SETD2Q9BYW2 2564 aaPredicted RBP-0.73□□□□□ -2.53
GPN3-209ENST00000551079 CCDC58Q4VC31 144 aa-0.73□□□□□ -2.53
GPN3-209ENST00000551079 PPP3R2Q96LZ3 170 aa-0.73□□□□□ -2.53
GPN3-209ENST00000551079 CDC42SE2Q9NRR3 84 aa-0.73□□□□□ -2.53
GPN3-209ENST00000551079 NUP188Q5SRE5 1749 aa-0.73□□□□□ -2.53
GPN3-209ENST00000551079 NF1P21359 2839 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 PIGBOS1A0A0B4J2F0 54 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 APOC2P02655 101 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 BTG2P78543 158 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 KRTAP6-2Q3LI66 62 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 DEFB105AQ8NG35 78 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 PAIP2BQ9ULR5 123 aaKnown RBP-0.74□□□□□ -2.53
GPN3-209ENST00000551079 HERC1Q15751 4861 aa-0.74□□□□□ -2.53
GPN3-209ENST00000551079 MAGI1Q96QZ7 1491 aaPredicted RBP-0.74□□□□□ -2.53
GPN3-209ENST00000551079 NALCNQ8IZF0 1738 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 K7EP13 123 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 KRTAP20-2Q3LI61 65 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 LINC01600Q96MT4 127 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 NXT2Q9NPJ8 142 aaKnown RBP-0.75□□□□□ -2.53
GPN3-209ENST00000551079 CRIPTQ9P021 101 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 ARL2-SNX15V9GYD0 113 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 CREBBPQ92793 2442 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 A2ML1A8K2U0 1454 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 TOP2BQ02880 1626 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 PAPPA2Q9BXP8 1791 aa-0.75□□□□□ -2.53
GPN3-209ENST00000551079 M0R2T5 61 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 C9orf153Q5TBE3 101 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 TMEM263Q8WUH6 116 aaKnown RBP-0.76□□□□□ -2.53
GPN3-209ENST00000551079 ROCK2O75116 1388 aaKnown RBP-0.76□□□□□ -2.53
GPN3-209ENST00000551079 SMG6Q86US8 1419 aaKnown RBP-0.76□□□□□ -2.53
GPN3-209ENST00000551079 IQSEC2Q5JU85 1478 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 SHANK2Q9UPX8 1470 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 EHBP1L1Q8N3D4 1523 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 CC2D2AQ9P2K1 1620 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 PDCD11Q14690 1871 aaKnown RBP-0.76□□□□□ -2.53
GPN3-209ENST00000551079 DOPEY1Q5JWR5 2465 aa-0.76□□□□□ -2.53
GPN3-209ENST00000551079 ADGRL2O95490 1459 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 C1orf167Q5SNV9 1468 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 NLRP1Q9C000 1473 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 TRBV7-4A0A0J9YYF1 115 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 SSSCA1O60232 199 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 MGPP08493 103 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 AKAIN1P0CW23 69 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 UBA52P62987 128 aaKnown RBP-0.77□□□□□ -2.53
GPN3-209ENST00000551079 KRTAP19-8Q3LI54 63 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 C8orf59Q8N0T1 100 aaPredicted RBP-0.77□□□□□ -2.53
GPN3-209ENST00000551079 FDCSPQ8NFU4 85 aa-0.77□□□□□ -2.53
GPN3-209ENST00000551079 XRN1Q8IZH2 1706 aaKnown RBP-0.78□□□□□ -2.53
GPN3-209ENST00000551079 FAM223BA6NKX1 122 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 FGF7P21781 194 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 PP6455Q8WZ26 134 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 TSC22D3Q99576 134 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 DPH3P1Q9H4G8 78 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 APLNQ9ULZ1 77 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 COL4A6Q14031 1691 aa-0.78□□□□□ -2.53
GPN3-209ENST00000551079 LOC285095A0A1B0GVY8 99 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 IFNGP01579 166 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 GNG11P61952 73 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 Q0VG73 95 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 MANBALQ9NQG1 85 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 FAIMQ9NVQ4 179 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 CHD1O14646 1710 aa-0.79□□□□□ -2.54
GPN3-209ENST00000551079 SCAPERQ9BY12 1400 aa-0.8□□□□□ -2.54
GPN3-209ENST00000551079 A0A1B0GV90 55 aa-0.8□□□□□ -2.54
GPN3-209ENST00000551079 LAMA5O15230 3695 aa-0.8□□□□□ -2.54
GPN3-209ENST00000551079 MXRA5Q9NR99 2828 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms