RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 C20orf78Q9BR46 151 aa2.5□□□□□ -2.01
LETMD1-226ENST00000550755 TXNDC17Q9BRA2 123 aa2.5□□□□□ -2.01
LETMD1-226ENST00000550755 TTTY12Q9BZ98 90 aa2.5□□□□□ -2.01
LETMD1-226ENST00000550755 MED9Q9NWA0 146 aa2.5□□□□□ -2.01
LETMD1-226ENST00000550755 CR1P17927 2039 aa2.5□□□□□ -2.01
LETMD1-226ENST00000550755 DOCK10Q96BY6 2186 aa2.5□□□□□ -2.01
LETMD1-226ENST00000550755 F5P12259 2224 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 IGKV3-7A0A075B6H7 116 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 JMJD7-PLA2G4BH0Y9G9 81 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 SPTBP11277 2137 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 RNASE3P12724 160 aaKnown RBP2.49□□□□□ -2.01
LETMD1-226ENST00000550755 KRTAP13-1Q8IUC0 172 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 SERP2Q8N6R1 65 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 S100A16Q96FQ6 103 aaKnown RBP2.49□□□□□ -2.01
LETMD1-226ENST00000550755 ARFGEF3Q5TH69 2177 aa2.49□□□□□ -2.01
LETMD1-226ENST00000550755 GOLGA4Q13439 2230 aaKnown RBP2.48□□□□□ -2.01
LETMD1-226ENST00000550755 COL5A1P20908 1838 aaPredicted RBP2.48□□□□□ -2.01
LETMD1-226ENST00000550755 NDUFC1O43677 76 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 TRAPPC2P0DI81 140 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 TRAPPC2BP0DI82 140 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 UBE2D1P51668 147 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 TDRG1Q3Y452 100 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 C10orf128Q5T292 105 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 CYP2G1PQ6ZSU1 146 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 TRGV9Q99603 122 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 REG4Q9BYZ8 158 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 CACFD1Q9UGQ2 172 aa2.48□□□□□ -2.01
LETMD1-226ENST00000550755 CEP290O15078 2479 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 C10orf142B7Z368 130 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 IGHV3-30P01768 117 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 IFI6P09912 130 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 IGHV3-30-5P0DP03 117 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 S100ZQ8WXG8 99 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 MANBALQ9NQG1 85 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 UQCR10Q9UDW1 63 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 SPAG17Q6Q759 2223 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 CHD7Q9P2D1 2997 aa2.47□□□□□ -2.01
LETMD1-226ENST00000550755 TRANK1O15050 2925 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 MED13Q9UHV7 2174 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 MKI67P46013 3256 aaKnown RBP2.46□□□□□ -2.02
LETMD1-226ENST00000550755 TEX49A0A1B0GTD5 131 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 IGLC7A0M8Q6 106 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 HMGN4O00479 90 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 IGLV3-1P01715 115 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 APOC3P02656 99 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 PDE6GP18545 87 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 SNRPGP62308 76 aaKnown RBP2.46□□□□□ -2.02
LETMD1-226ENST00000550755 HCP5Q6MZN7 132 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 ALKAL2Q6UX46 152 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 COA5Q86WW8 74 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 WFDC10AQ9H1F0 79 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 RABAC1Q9UI14 185 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 CHD9Q3L8U1 2897 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 MED12Q93074 2177 aa2.46□□□□□ -2.02
LETMD1-226ENST00000550755 CDH23Q9H251 3354 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 TRBV7-3A0A075B6L6 115 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 TRBV6-5A0A0K0K1A5 114 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 DNAL4O96015 105 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 SMIM11AP58511 58 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 TMEM14CQ9P0S9 112 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 PI4KAP42356 2102 aa2.45□□□□□ -2.02
LETMD1-226ENST00000550755 LAMA3Q16787 3333 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 HIGD1CA8MV81 97 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 SYS1-DBNDD2H3BUS1 97 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 FAM167A-AS1Q96KT0 104 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 AMELYQ99218 206 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 NXT2Q9NPJ8 142 aaKnown RBP2.44□□□□□ -2.02
LETMD1-226ENST00000550755 PRO1854Q9UHT4 67 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 DOCK11Q5JSL3 2073 aa2.44□□□□□ -2.02
LETMD1-226ENST00000550755 CACNA1EQ15878 2313 aa2.43□□□□□ -2.02
LETMD1-226ENST00000550755 IGLV3-32A0A0A0MS00 114 aa2.43□□□□□ -2.02
LETMD1-226ENST00000550755 HMGN2P05204 90 aaKnown RBP2.43□□□□□ -2.02
LETMD1-226ENST00000550755 WFDC6Q9BQY6 131 aa2.43□□□□□ -2.02
LETMD1-226ENST00000550755 KNL1Q8NG31 2342 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 J3QRE1 110 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 UBE2D3P61077 147 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 UBE2D2P62837 147 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 SSBP1Q04837 148 aaKnown RBP2.42□□□□□ -2.02
LETMD1-226ENST00000550755 ADIRFQ15847 76 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 Q8N6K4 173 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 CYSTM1Q9H1C7 97 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 SPCS1Q9Y6A9 102 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 V9GYH0 126 aa2.42□□□□□ -2.02
LETMD1-226ENST00000550755 TNRC6BQ9UPQ9 1833 aaKnown RBP2.42□□□□□ -2.02
LETMD1-226ENST00000550755 RANBP2P49792 3224 aaKnown RBP2.41□□□□□ -2.02
LETMD1-226ENST00000550755 LAMA2P24043 3122 aaKnown RBP2.41□□□□□ -2.02
LETMD1-226ENST00000550755 CHKB-CPT1BH3BT56 60 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 EDDM3BP56851 147 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 FXYD6P3P58550 94 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 ZNF56Q15929 161 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 LINC00322Q6ZN03 302 aaPredicted RBP2.41□□□□□ -2.02
LETMD1-226ENST00000550755 C20orf197Q8N268 126 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 ST20Q9HBF5 79 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 CMC2Q9NRP2 79 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 ABCA4P78363 2273 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 SPTBN5Q9NRC6 3674 aaKnown RBP2.41□□□□□ -2.02
LETMD1-226ENST00000550755 ASXL3Q9C0F0 2248 aa2.41□□□□□ -2.02
LETMD1-226ENST00000550755 TRAV22A0A0B4J277 110 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 SPTY2D1-AS1A0A0U1RR47 76 aa2.4□□□□□ -2.03
LETMD1-226ENST00000550755 LOC101927531A0A1B0GV80 90 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms