RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 CMC4P56277 68 aaPredicted RBP3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 RRN3P1Q2M238 152 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 LCA10Q71F78 164 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 ODF3Q96PU9 254 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 PIEZO2Q9H5I5 2752 aa3.34□□□□□ -1.87
ATP2B1-206ENST00000549727 RIF1Q5UIP0 2472 aaKnown RBP3.34□□□□□ -1.87
ATP2B1-206ENST00000549727 TRBV6-5A0A0K0K1A5 114 aa3.34□□□□□ -1.88
ATP2B1-206ENST00000549727 A6NDX4 124 aa3.34□□□□□ -1.88
ATP2B1-206ENST00000549727 SNRPD3P62318 126 aaKnown RBP3.34□□□□□ -1.88
ATP2B1-206ENST00000549727 HRCT1Q6UXD1 115 aa3.34□□□□□ -1.88
ATP2B1-206ENST00000549727 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.88
ATP2B1-206ENST00000549727 CARD19Q96LW7 228 aa3.34□□□□□ -1.88
ATP2B1-206ENST00000549727 TRBV7-3A0A075B6L6 115 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 TRBV20-1A0A075B6N2 111 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 TMEM223A0PJW6 202 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 C11orf86A6NJI1 115 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 B4DSR2 109 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 H3BUX3 64 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 POLR2KP53803 58 aaKnown RBP3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 RHOHQ15669 191 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 C9orf129Q5T035 196 aaKnown RBP3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 C10orf105Q8TEF2 133 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 CCL19Q99731 98 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 PRADC1Q9BSG0 188 aa3.33□□□□□ -1.88
ATP2B1-206ENST00000549727 MUC3AQ02505 3323 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 GVINP1Q7Z2Y8 2422 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 TRBV27A0A0K0K1C4 114 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 C19orf84I3L1E1 186 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 GNRH2O43555 120 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 PRM2P04554 102 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 MSMBP08118 114 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 LY6EQ16553 131 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 PRR9Q5T870 116 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 BRD3OSQ6XYD6 125 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 RPL39LQ96EH5 51 aaKnown RBP3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 NAA38Q9BRA0 125 aaKnown RBP3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 TTTY13Q9BZ97 58 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 XAGE1AQ9HD64 81 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 MRPL16Q9NX20 251 aaKnown RBP3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 KIF25-AS1Q9Y6Z4 181 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 LOC400499M0QZD8 3231 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 TLN1Q9Y490 2541 aaKnown RBP3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 AKAP13Q12802 2813 aa3.32□□□□□ -1.88
ATP2B1-206ENST00000549727 ABCA4P78363 2273 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 PTPRQQ9UMZ3 2332 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 FAM168BA1KXE4 195 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 SDHAF1A6NFY7 115 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 H3BMG7 143 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 I3L3M4 83 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 K7ERJ3 54 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 ZNF73O43830 326 aaPredicted RBP3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 LGALS3P17931 250 aaKnown RBP3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 TMEM170BQ5T4T1 132 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 AMTNQ6UX39 209 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 ARHGAP32A7KAX9 2087 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 PTPRZ1P23471 2315 aaPredicted RBP3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 ZFHX4Q86UP3 3567 aa3.31□□□□□ -1.88
ATP2B1-206ENST00000549727 WNK2Q9Y3S1 2297 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 IGKV3-7A0A075B6H7 116 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 TRAV12-3A0A0B4J271 114 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 TRBV7-6A0A0J9YX20 115 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 A0A0J9YX75 114 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 J3QQQ9 107 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 LEPROTO15243 131 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 INAFM2P0DMQ5 153 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 IGHV3-30-3P0DP02 117 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 COX6B1P14854 86 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 PSMB8P28062 276 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 UBE2D1P51668 147 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 LINC00315P59091 139 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 BLCAPP62952 87 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 ZNF56Q15929 161 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 Q5XG85 94 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 CIRBP-AS1Q8TBR5 109 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 MGAQ8IWI9 3026 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 SPTA1P02549 2419 aa3.3□□□□□ -1.88
ATP2B1-206ENST00000549727 TRAV2A0A0B4J234 112 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 A0A0J9YY99 117 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 A8MWV9 139 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 TMEM262E9PQX1 116 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 WFDC2Q14508 124 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 ETDBQ3ZM63 59 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 FAM74A4Q5TZK3 123 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 Q6ZQT7 251 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 NDUFA11Q86Y39 141 aa3.29□□□□□ -1.88
ATP2B1-206ENST00000549727 LINC00612Q8N6U2 182 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms