RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
PRDM4-204ENST00000549416 SDK2Q58EX2 2172 aa2.26□□□□□ -2.05
PRDM4-204ENST00000549416 SPINT3P49223 89 aa2.26□□□□□ -2.05
PRDM4-204ENST00000549416 MRPL36Q9P0J6 103 aaKnown RBP2.26□□□□□ -2.05
PRDM4-204ENST00000549416 UBE2D4Q9Y2X8 147 aa2.26□□□□□ -2.05
PRDM4-204ENST00000549416 PLXNA2O75051 1894 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 ARMS2P0C7Q2 107 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 SSBP1Q04837 148 aaKnown RBP2.25□□□□□ -2.05
PRDM4-204ENST00000549416 Q86TA4 180 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 TOMM5Q8N4H5 51 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 Q9BRP9 147 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 PROK2Q9HC23 129 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 ORMDL1Q9P0S3 153 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 PSORS1C2Q9UIG4 136 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 Q9Y3F1 56 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 LOC285556D6RIA3 1793 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 LCTP09848 1927 aa2.25□□□□□ -2.05
PRDM4-204ENST00000549416 EP400Q96L91 3159 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 A0A0J9YY99 117 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 D6R8Y8 96 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 PPP1R17O96001 155 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 IGHV3-30P01768 117 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 IGHV3-30-5P0DP03 117 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 MUSTN1Q8IVN3 82 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 AMELXQ99217 191 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 PRR15LQ9BU68 103 aa2.24□□□□□ -2.05
PRDM4-204ENST00000549416 COL5A1P20908 1838 aaPredicted RBP2.24□□□□□ -2.05
PRDM4-204ENST00000549416 ZNF407Q9C0G0 2248 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 SSC5DA1L4H1 1573 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 EXPH5Q8NEV8 1989 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 MYO16Q9Y6X6 1858 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 CLPSL1A2RUU4 121 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 CTSGP08311 255 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 SPAG11BQ08648 103 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 SPAG11AQ6PDA7 123 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 DEFB107AQ8IZN7 70 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 CASP8AP2Q9UKL3 1982 aa2.23□□□□□ -2.05
PRDM4-204ENST00000549416 COL4A1P02462 1669 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 IGKV3-7A0A075B6H7 116 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 DNAL4O96015 105 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 CNBPP62633 177 aaKnown RBP2.22□□□□□ -2.05
PRDM4-204ENST00000549416 FAM74A4Q5TZK3 123 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 Q6ZTI0 123 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 PATE1Q8WXA2 126 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 R4GN34 69 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 PAPPA2Q9BXP8 1791 aa2.22□□□□□ -2.05
PRDM4-204ENST00000549416 TRBV7-4A0A0J9YYF1 115 aa2.21□□□□□ -2.06
PRDM4-204ENST00000549416 TRBV6-5A0A0K0K1A5 114 aa2.21□□□□□ -2.06
PRDM4-204ENST00000549416 PDCD11Q14690 1871 aaKnown RBP2.21□□□□□ -2.06
PRDM4-204ENST00000549416 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
PRDM4-204ENST00000549416 TRPM7Q96QT4 1865 aa2.21□□□□□ -2.06
PRDM4-204ENST00000549416 R4GMQ9 66 aa2.21□□□□□ -2.06
PRDM4-204ENST00000549416 SNRNP200O75643 2136 aaKnown RBP2.21□□□□□ -2.06
PRDM4-204ENST00000549416 SIP14410 1827 aa2.21□□□□□ -2.06
PRDM4-204ENST00000549416 CACNA1DQ01668 2161 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 MUC4Q99102 2169 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 CPAMD8Q8IZJ3 1885 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 A0A0G2JMZ2 1700 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 LRRC37A2A6NM11 1700 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 EML5Q05BV3 1969 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 C10orf142B7Z368 130 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 CCL3L1P16619 93 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 SCN3AQ9NY46 2000 aa2.2□□□□□ -2.06
PRDM4-204ENST00000549416 F8VRH5 84 aa2.19□□□□□ -2.06
PRDM4-204ENST00000549416 PPYP01298 95 aa2.19□□□□□ -2.06
PRDM4-204ENST00000549416 PRH1P02810 166 aa2.19□□□□□ -2.06
PRDM4-204ENST00000549416 ZNF563Q8TA94 476 aa2.19□□□□□ -2.06
PRDM4-204ENST00000549416 COX7B2Q8TF08 81 aa2.19□□□□□ -2.06
PRDM4-204ENST00000549416 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
PRDM4-204ENST00000549416 MALRD1Q5VYJ5 2156 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 A0A1B0GUT8 65 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 TRBV6-4A0A1B0GX49 114 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 LINC01549A6NIU2 74 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 JMJD7-PLA2G4BH0Y9G9 81 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 HCRTO43612 131 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 CD52P31358 61 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 S100A3P33764 101 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 CCL18P55774 89 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 SMIM4Q8WVI0 70 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 PPP1R1CQ8WVI7 109 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 NMES1Q9C002 83 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 COL11A1P12107 1806 aaPredicted RBP2.18□□□□□ -2.06
PRDM4-204ENST00000549416 ZNF236Q9UL36 1845 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 KIAA2026Q5HYC2 2103 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 COL4A5P29400 1685 aa2.18□□□□□ -2.06
PRDM4-204ENST00000549416 SRCAPQ6ZRS2 3230 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 PCNX2A6NKB5 2137 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 MED12LQ86YW9 2145 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 A0A087WVE0 104 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 UQCR11O14957 56 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 IGKV4-1P06312 121 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 PDE6GP18545 87 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 NCBP2-AS2Q69YL0 99 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 FDCSPQ8NFU4 85 aa2.17□□□□□ -2.06
PRDM4-204ENST00000549416 PRR14LQ5THK1 2151 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 KIAA1549Q9HCM3 1950 aa2.16□□□□□ -2.06
PRDM4-204ENST00000549416 NDUFB1O75438 58 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms