RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 BAHCC1Q9P281 2608 aa7.99□□□□□ -1.13
LINC00661-204ENST00000549354 TMEM262E9PQX1 116 aa7.99□□□□□ -1.13
LINC00661-204ENST00000549354 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
LINC00661-204ENST00000549354 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
LINC00661-204ENST00000549354 PIK3CD-AS1Q5SR53 167 aa7.99□□□□□ -1.13
LINC00661-204ENST00000549354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.99□□□□□ -1.13
LINC00661-204ENST00000549354 H3BMM0 161 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 PFN2P35080 140 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 UBE2WQ96B02 151 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 H7C423 109 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 A0A0B4J2C4 111 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 IGHV1-58A0A0C4DH39 117 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 SBSPONQ8IVN8 264 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 LITAFQ99732 161 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
LINC00661-204ENST00000549354 COX6CP09669 75 aa7.97□□□□□ -1.13
LINC00661-204ENST00000549354 GAGE6Q13070 117 aa7.97□□□□□ -1.13
LINC00661-204ENST00000549354 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
LINC00661-204ENST00000549354 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
LINC00661-204ENST00000549354 SHISA2Q6UWI4 295 aa7.97□□□□□ -1.13
LINC00661-204ENST00000549354 PRIMA1Q86XR5 153 aa7.97□□□□□ -1.13
LINC00661-204ENST00000549354 NHLRC4P0CG21 123 aaPredicted RBP7.96□□□□□ -1.13
LINC00661-204ENST00000549354 VSIG2Q96IQ7 327 aa7.96□□□□□ -1.13
LINC00661-204ENST00000549354 Q9HAA7 133 aa7.96□□□□□ -1.14
LINC00661-204ENST00000549354 TRBV10-2A0A0K0K1G8 114 aa7.96□□□□□ -1.14
LINC00661-204ENST00000549354 NDUFV3P56181 108 aaKnown RBP7.96□□□□□ -1.14
LINC00661-204ENST00000549354 C5orf38Q86SI9 138 aa7.95□□□□□ -1.14
LINC00661-204ENST00000549354 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
LINC00661-204ENST00000549354 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
LINC00661-204ENST00000549354 OR13C6PQ8NH95 151 aa7.95□□□□□ -1.14
LINC00661-204ENST00000549354 UBE2D4Q9Y2X8 147 aa7.95□□□□□ -1.14
LINC00661-204ENST00000549354 KRTAP10-3P60369 221 aa7.94□□□□□ -1.14
LINC00661-204ENST00000549354 CHCHD5Q9BSY4 110 aa7.94□□□□□ -1.14
LINC00661-204ENST00000549354 MIAQ16674 131 aa7.94□□□□□ -1.14
LINC00661-204ENST00000549354 ODF3L2Q3SX64 289 aa7.94□□□□□ -1.14
LINC00661-204ENST00000549354 CITED1Q99966 193 aa7.94□□□□□ -1.14
LINC00661-204ENST00000549354 FAM110AQ9BQ89 295 aa7.94□□□□□ -1.14
LINC00661-204ENST00000549354 TRBV30A0A0K0K1B3 111 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 IFITM1P13164 125 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 INAFM1C9JVW0 142 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 UBE2L6O14933 153 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 HTN3P15516 51 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
LINC00661-204ENST00000549354 ZNF415Q09FC8 603 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 IGLV10-54A0A075B6I4 117 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
LINC00661-204ENST00000549354 ATP5G1P05496 136 aa7.92□□□□□ -1.14
LINC00661-204ENST00000549354 TRGV4A0A0C4DH28 118 aa7.91□□□□□ -1.14
LINC00661-204ENST00000549354 INSP01308 110 aa7.91□□□□□ -1.14
LINC00661-204ENST00000549354 LINC00158P58513 81 aa7.91□□□□□ -1.14
LINC00661-204ENST00000549354 BEAN1Q3B7T3 259 aa7.91□□□□□ -1.14
LINC00661-204ENST00000549354 LINC00526Q96FQ7 95 aa7.91□□□□□ -1.14
LINC00661-204ENST00000549354 TINCRA0A1B0GVN0 87 aa7.9□□□□□ -1.14
LINC00661-204ENST00000549354 CIRBPQ14011 172 aaKnown RBP7.9□□□□□ -1.15
LINC00661-204ENST00000549354 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.15
LINC00661-204ENST00000549354 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.15
LINC00661-204ENST00000549354 SOSTDC1Q6X4U4 206 aa7.89□□□□□ -1.15
LINC00661-204ENST00000549354 C19orf73Q9NVV2 129 aa7.89□□□□□ -1.15
LINC00661-204ENST00000549354 SLPIP03973 132 aa7.89□□□□□ -1.15
LINC00661-204ENST00000549354 XCL1P47992 114 aa7.89□□□□□ -1.15
LINC00661-204ENST00000549354 LINC00308Q8TCZ7 52 aa7.89□□□□□ -1.15
LINC00661-204ENST00000549354 EDA2RQ9HAV5 297 aa7.89□□□□□ -1.15
LINC00661-204ENST00000549354 LST1O00453 97 aa7.88□□□□□ -1.15
LINC00661-204ENST00000549354 LINC00242Q5T6M2 205 aa7.88□□□□□ -1.15
LINC00661-204ENST00000549354 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
LINC00661-204ENST00000549354 SPANXA1Q9NS26 97 aa7.88□□□□□ -1.15
LINC00661-204ENST00000549354 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
LINC00661-204ENST00000549354 RPL36AP83881 106 aaKnown RBP7.88□□□□□ -1.15
LINC00661-204ENST00000549354 RPL36ALQ969Q0 106 aaKnown RBP7.88□□□□□ -1.15
LINC00661-204ENST00000549354 C1orf158Q8N1D5 194 aa7.87□□□□□ -1.15
LINC00661-204ENST00000549354 C11orf72Q8NBR9 251 aa7.87□□□□□ -1.15
LINC00661-204ENST00000549354 SPANXDQ9BXN6 97 aa7.87□□□□□ -1.15
LINC00661-204ENST00000549354 SPANXCQ9NY87 97 aa7.87□□□□□ -1.15
LINC00661-204ENST00000549354 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
LINC00661-204ENST00000549354 Q8N3U1 123 aa7.86□□□□□ -1.15
LINC00661-204ENST00000549354 FAM236AA0A1B0GUQ0 79 aa7.86□□□□□ -1.15
LINC00661-204ENST00000549354 FAM236BA0A1B0GV22 79 aa7.86□□□□□ -1.15
LINC00661-204ENST00000549354 NSD1Q96L73 2696 aaPredicted RBP7.86□□□□□ -1.15
LINC00661-204ENST00000549354 PAX4O43316 350 aa7.86□□□□□ -1.15
LINC00661-204ENST00000549354 IL17DQ8TAD2 202 aa7.86□□□□□ -1.15
LINC00661-204ENST00000549354 DAZ2Q13117 558 aaKnown RBP7.85□□□□□ -1.15
LINC00661-204ENST00000549354 DAZ4Q86SG3 579 aaKnown RBP7.85□□□□□ -1.15
LINC00661-204ENST00000549354 DAZ3Q9NR90 486 aaKnown RBP7.85□□□□□ -1.15
LINC00661-204ENST00000549354 GAGE2AQ6NT46 116 aa7.85□□□□□ -1.15
LINC00661-204ENST00000549354 MIR7-3HGQ8N6C7 128 aa7.85□□□□□ -1.15
LINC00661-204ENST00000549354 FAM218AQ96MZ4 157 aa7.85□□□□□ -1.15
LINC00661-204ENST00000549354 IGLV4-60A0A075B6I1 120 aa7.85□□□□□ -1.15
LINC00661-204ENST00000549354 H3BT86 120 aa7.85□□□□□ -1.15
LINC00661-204ENST00000549354 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
LINC00661-204ENST00000549354 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
LINC00661-204ENST00000549354 NDUFA1O15239 70 aa7.84□□□□□ -1.15
LINC00661-204ENST00000549354 SMIM1B2RUZ4 78 aa7.84□□□□□ -1.15
LINC00661-204ENST00000549354 SMCR5Q8TEV8 140 aa7.83□□□□□ -1.16
LINC00661-204ENST00000549354 HERVK_113P63121 156 aa7.82□□□□□ -1.16
LINC00661-204ENST00000549354 PF4P02776 101 aa7.82□□□□□ -1.16
LINC00661-204ENST00000549354 DNAJC30Q96LL9 226 aa7.82□□□□□ -1.16
LINC00661-204ENST00000549354 CSNK1G2-AS1Q8NCQ2 148 aa7.81□□□□□ -1.16
LINC00661-204ENST00000549354 K7EQD1 137 aa7.81□□□□□ -1.16
LINC00661-204ENST00000549354 COX7A2LO14548 114 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms