RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 DPM2O94777 84 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 IGHV3-30P01768 117 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 IGHV3-33P01772 117 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 IGKCP01834 107 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 IGHV3-30-3P0DP02 117 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 IGHV3-30-5P0DP03 117 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 PKIAP61925 76 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 COX6A2Q02221 97 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 NFE4Q86UQ8 179 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 C2orf88Q9BSF0 95 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 KLK5Q9Y337 293 aaPredicted RBP5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
DEPDC4-207ENST00000549249 TRAV9-2A0A087WT02 112 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 IGKV3OR2-268A0A0C4DH90 116 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 LCE6AA0A183 80 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 ANGP03950 147 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 ZNF22P17026 224 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 PLNP26678 52 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 CCL18P55774 89 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 LINC00242Q5T6M2 205 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 LINC00269Q8N2A0 174 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 PAM16Q9Y3D7 125 aa5.47□□□□□ -1.53
DEPDC4-207ENST00000549249 TENM2Q9NT68 2774 aa5.46□□□□□ -1.53
DEPDC4-207ENST00000549249 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 LINC00959A0A1B0GUT2 108 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 TINCRA0A1B0GVN0 87 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 DNAH10OSP0CZ25 163 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 TCTAP57738 103 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 REG3AQ06141 175 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 ENHOQ6UWT2 76 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 STPG4Q8N801 248 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 VAMP8Q9BV40 100 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 KLK12Q9UKR0 248 aa5.46□□□□□ -1.54
DEPDC4-207ENST00000549249 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
DEPDC4-207ENST00000549249 SIVA1O15304 175 aa5.45□□□□□ -1.54
DEPDC4-207ENST00000549249 SPATA45Q537H7 98 aa5.45□□□□□ -1.54
DEPDC4-207ENST00000549249 TMEM170BQ5T4T1 132 aa5.45□□□□□ -1.54
DEPDC4-207ENST00000549249 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
DEPDC4-207ENST00000549249 CCL25O15444 150 aa5.44□□□□□ -1.54
DEPDC4-207ENST00000549249 HERVK_113P63121 156 aa5.44□□□□□ -1.54
DEPDC4-207ENST00000549249 S100A12P80511 92 aa5.44□□□□□ -1.54
DEPDC4-207ENST00000549249 CDKN2A-AS1Q9UH64 79 aa5.44□□□□□ -1.54
DEPDC4-207ENST00000549249 LYSTQ99698 3801 aa5.44□□□□□ -1.54
DEPDC4-207ENST00000549249 IGLV10-54A0A075B6I4 117 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 TRAV8-3A0A0A6YYJ7 113 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 IGHV3OR16-9A0A0B4J2B5 98 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 TSPEAR-AS2P59090 65 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 SEC11AP67812 179 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 PLECQ15149 4684 aaKnown RBP5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 KRTAP26-1Q6PEX3 210 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 UBE2DNLQ8IWF7 75 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 LINC00469Q8N7U9 141 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 UBE2WQ96B02 151 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 KRTAP1-5Q9BYS1 174 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 TTTY13Q9BZ97 58 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 PRO1933Q9H354 126 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 GEMIN7Q9H840 131 aaKnown RBP5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 Q9H8V8 135 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
DEPDC4-207ENST00000549249 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 HSBP1L1C9JCN9 74 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 E9PLD3 99 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 SPINK8P0C7L1 97 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 XCL1P47992 114 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 FOXI1Q12951 378 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 SS18Q15532 418 aa5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 CHCHD10Q8WYQ3 142 aaPredicted RBP5.42□□□□□ -1.54
DEPDC4-207ENST00000549249 A0A087WZ39 114 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 IBA57-AS1B1ANH7 110 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 CRPP02741 224 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 C5orf38Q86SI9 138 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 C14orf144Q96I85 54 aa5.41□□□□□ -1.54
DEPDC4-207ENST00000549249 RYR2Q92736 4967 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 SACSQ9NZJ4 4579 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 TRAV8-4A0A0B4J246 113 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 IGHV1-58A0A0C4DH39 117 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 LEPROTO15243 131 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 COX8AP10176 69 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 NMUP48645 174 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 HERVK_113P61574 105 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 MIAQ16674 131 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 Q9HAA7 133 aa5.4□□□□□ -1.54
DEPDC4-207ENST00000549249 DNAH6Q9C0G6 4158 aa5.39□□□□□ -1.55
DEPDC4-207ENST00000549249 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
DEPDC4-207ENST00000549249 H3BRM9 83 aa5.39□□□□□ -1.55
DEPDC4-207ENST00000549249 C10orf126Q8N4M7 172 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms