RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ATP5G1P05496 136 aa13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 ZNF25P17030 456 aaPredicted RBP13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 HINT1P49773 126 aaPredicted RBP13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 HSD52Q0P140 79 aa13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 MPV17L2Q567V2 206 aa13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 C1orf134Q5TEV5 83 aa13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 TRBV6-8A0A0A6YYG3 113 aa13.75□□□□□ -0.21
CTDSP2-204ENST00000548823 A0A0J9YXV3 536 aa13.75□□□□□ -0.21
CTDSP2-204ENST00000548823 ZNF22P17026 224 aaPredicted RBP13.75□□□□□ -0.21
CTDSP2-204ENST00000548823 BVES-AS1Q5T3Y7 98 aa13.75□□□□□ -0.21
CTDSP2-204ENST00000548823 TMEM170BQ5T4T1 132 aa13.75□□□□□ -0.21
CTDSP2-204ENST00000548823 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
CTDSP2-204ENST00000548823 TMEM223A0PJW6 202 aa13.74□□□□□ -0.21
CTDSP2-204ENST00000548823 GYPEP15421 78 aa13.74□□□□□ -0.21
CTDSP2-204ENST00000548823 BATFQ16520 125 aa13.74□□□□□ -0.21
CTDSP2-204ENST00000548823 ATP6V0E2Q8NHE4 81 aa13.74□□□□□ -0.21
CTDSP2-204ENST00000548823 MYMXA0A1B0GTQ4 84 aa13.73□□□□□ -0.21
CTDSP2-204ENST00000548823 UBE2L6O14933 153 aa13.73□□□□□ -0.21
CTDSP2-204ENST00000548823 PAX4O43316 350 aa13.73□□□□□ -0.21
CTDSP2-204ENST00000548823 UBE2D1P51668 147 aa13.73□□□□□ -0.21
CTDSP2-204ENST00000548823 TIRAPP58753 221 aa13.73□□□□□ -0.21
CTDSP2-204ENST00000548823 CELA1Q9UNI1 258 aa13.73□□□□□ -0.21
CTDSP2-204ENST00000548823 SEC11AP67812 179 aa13.72□□□□□ -0.21
CTDSP2-204ENST00000548823 TAL2Q16559 108 aa13.72□□□□□ -0.21
CTDSP2-204ENST00000548823 UBE2DNLQ8IWF7 75 aa13.72□□□□□ -0.21
CTDSP2-204ENST00000548823 OR5A1Q8NGJ0 315 aa13.72□□□□□ -0.21
CTDSP2-204ENST00000548823 TTTY13Q9BZ97 58 aa13.72□□□□□ -0.21
CTDSP2-204ENST00000548823 CDC42SE2Q9NRR3 84 aa13.72□□□□□ -0.21
CTDSP2-204ENST00000548823 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.21
CTDSP2-204ENST00000548823 LEPROTO15243 131 aa13.71□□□□□ -0.21
CTDSP2-204ENST00000548823 TMEM101Q96IK0 257 aa13.71□□□□□ -0.21
CTDSP2-204ENST00000548823 IGLV5-45A0A087WSX0 123 aa13.71□□□□□ -0.22
CTDSP2-204ENST00000548823 C12orf74Q32Q52 190 aa13.71□□□□□ -0.22
CTDSP2-204ENST00000548823 AMMECR1LQ6DCA0 310 aa13.71□□□□□ -0.22
CTDSP2-204ENST00000548823 PLEKHB2Q96CS7 222 aa13.71□□□□□ -0.22
CTDSP2-204ENST00000548823 TNP2Q05952 138 aa13.7□□□□□ -0.22
CTDSP2-204ENST00000548823 VSIG2Q96IQ7 327 aa13.7□□□□□ -0.22
CTDSP2-204ENST00000548823 A0A1B0GV90 55 aa13.69□□□□□ -0.22
CTDSP2-204ENST00000548823 SH2D6Q7Z4S9 175 aa13.69□□□□□ -0.22
CTDSP2-204ENST00000548823 J3QQQ9 107 aa13.68□□□□□ -0.22
CTDSP2-204ENST00000548823 HERVK_113P63121 156 aa13.68□□□□□ -0.22
CTDSP2-204ENST00000548823 RNASE13Q5GAN3 156 aaKnown RBP13.68□□□□□ -0.22
CTDSP2-204ENST00000548823 ORAOV1Q8WV07 137 aa13.68□□□□□ -0.22
CTDSP2-204ENST00000548823 DNAH5Q8TE73 4624 aa13.67□□□□□ -0.22
CTDSP2-204ENST00000548823 ZNF815PA8K554 130 aa13.67□□□□□ -0.22
CTDSP2-204ENST00000548823 GEMIN7Q9H840 131 aaKnown RBP13.67□□□□□ -0.22
CTDSP2-204ENST00000548823 H3BRM9 83 aa13.65□□□□□ -0.22
CTDSP2-204ENST00000548823 LGALS3P17931 250 aaKnown RBP13.65□□□□□ -0.22
CTDSP2-204ENST00000548823 MRPL23Q16540 153 aaKnown RBP13.65□□□□□ -0.22
CTDSP2-204ENST00000548823 CHCHD5Q9BSY4 110 aa13.65□□□□□ -0.22
CTDSP2-204ENST00000548823 TM2D2Q9BX73 214 aa13.65□□□□□ -0.22
CTDSP2-204ENST00000548823 IGHV1-58A0A0C4DH39 117 aa13.64□□□□□ -0.23
CTDSP2-204ENST00000548823 A0A1B0GUV1 79 aa13.64□□□□□ -0.23
CTDSP2-204ENST00000548823 F5H768 121 aa13.64□□□□□ -0.23
CTDSP2-204ENST00000548823 H3BNG1 76 aa13.64□□□□□ -0.23
CTDSP2-204ENST00000548823 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
CTDSP2-204ENST00000548823 A6NDN8 102 aa13.63□□□□□ -0.23
CTDSP2-204ENST00000548823 EPM2AB3EWF7 344 aa13.63□□□□□ -0.23
CTDSP2-204ENST00000548823 TSPEAR-AS2P59090 65 aa13.63□□□□□ -0.23
CTDSP2-204ENST00000548823 GAGE6Q13070 117 aa13.63□□□□□ -0.23
CTDSP2-204ENST00000548823 INAFM2P0DMQ5 153 aa13.62□□□□□ -0.23
CTDSP2-204ENST00000548823 LINC00469Q8N7U9 141 aa13.62□□□□□ -0.23
CTDSP2-204ENST00000548823 ICOSQ9Y6W8 199 aa13.62□□□□□ -0.23
CTDSP2-204ENST00000548823 IGHV3-30-3P0DP02 117 aa13.61□□□□□ -0.23
CTDSP2-204ENST00000548823 CEND1Q8N111 149 aa13.61□□□□□ -0.23
CTDSP2-204ENST00000548823 SPANXB1Q9NS25 103 aaPredicted RBP13.61□□□□□ -0.23
CTDSP2-204ENST00000548823 A0A0J9YY99 117 aa13.6□□□□□ -0.23
CTDSP2-204ENST00000548823 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
CTDSP2-204ENST00000548823 CDKN2A-AS1Q9UH64 79 aa13.6□□□□□ -0.23
CTDSP2-204ENST00000548823 IGLV4-60A0A075B6I1 120 aa13.58□□□□□ -0.23
CTDSP2-204ENST00000548823 COX6A2Q02221 97 aa13.58□□□□□ -0.23
CTDSP2-204ENST00000548823 TRAV13-1A0A0B4J241 112 aa13.58□□□□□ -0.24
CTDSP2-204ENST00000548823 IGLV5-39A0A0G2JS06 123 aa13.58□□□□□ -0.24
CTDSP2-204ENST00000548823 TAX1BP3O14907 124 aa13.58□□□□□ -0.24
CTDSP2-204ENST00000548823 CCL25O15444 150 aa13.58□□□□□ -0.24
CTDSP2-204ENST00000548823 HIST1H4GQ99525 98 aa13.58□□□□□ -0.24
CTDSP2-204ENST00000548823 GCSHP23434 173 aa13.57□□□□□ -0.24
CTDSP2-204ENST00000548823 C6orf223Q8N319 242 aa13.57□□□□□ -0.24
CTDSP2-204ENST00000548823 COX11Q9Y6N1 276 aa13.57□□□□□ -0.24
CTDSP2-204ENST00000548823 A0A096LPF7 62 aa13.56□□□□□ -0.24
CTDSP2-204ENST00000548823 TRAV8-3A0A0A6YYJ7 113 aa13.56□□□□□ -0.24
CTDSP2-204ENST00000548823 HTN3P15516 51 aa13.56□□□□□ -0.24
CTDSP2-204ENST00000548823 LELP1Q5T871 98 aa13.56□□□□□ -0.24
CTDSP2-204ENST00000548823 SPINK8P0C7L1 97 aa13.55□□□□□ -0.24
CTDSP2-204ENST00000548823 FXYD2P54710 66 aa13.55□□□□□ -0.24
CTDSP2-204ENST00000548823 RBX1P62877 108 aa13.55□□□□□ -0.24
CTDSP2-204ENST00000548823 IGHV3-64A0A075B6Q5 118 aa13.54□□□□□ -0.24
CTDSP2-204ENST00000548823 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
CTDSP2-204ENST00000548823 UBR4Q5T4S7 5183 aa13.53□□□□□ -0.24
CTDSP2-204ENST00000548823 NBDYA0A0U1RRE5 68 aa13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 TMEM262E9PQX1 116 aa13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 SMIM13P0DJ93 91 aa13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 PTTG1IPP53801 180 aa13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 SRSF9Q13242 221 aaKnown RBP eCLIP13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 NDUFA12Q9UI09 145 aa13.52□□□□□ -0.25
CTDSP2-204ENST00000548823 A0A0J9YXY3 114 aa13.51□□□□□ -0.25
CTDSP2-204ENST00000548823 LINC00959A0A1B0GUT2 108 aa13.51□□□□□ -0.25
CTDSP2-204ENST00000548823 MYCBP2O75592 4640 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms