RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RNASE7Q9H1E1 156 aaKnown RBP1.87□□□□□ -2.11
PTCH1-216ENST00000548379 NPVFQ9HCQ7 196 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 MRPL16Q9NX20 251 aaKnown RBP1.87□□□□□ -2.11
PTCH1-216ENST00000548379 PSENENQ9NZ42 101 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 TIMM9Q9Y5J7 89 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 HSPG2P98160 4391 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 A0A087WXM4 84 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 A0A1B0GW54 56 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 IGSF23A1L1A6 192 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 IBA57-AS1B1ANH7 110 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 FNDC10F2Z333 226 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 IGHV3-30P01768 117 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 IGHV3-33P01772 117 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 NMBP08949 121 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 IGHV3-30-5P0DP03 117 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 PRB4P10163 310 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 CSN1S1P47710 185 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 RPS20P60866 119 aaKnown RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 RPL37AP61513 92 aaKnown RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 RRAS2P62070 204 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 NCS1P62166 190 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 LGALSLQ3ZCW2 172 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 TMEM128Q5BJH2 165 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 LINC01556Q5JQF7 62 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 C10orf113Q5VZT2 155 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 RASL11AQ6T310 242 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 DAND5Q8N907 189 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 SMIM4Q8WVI0 70 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 PFDN5Q99471 154 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 RSL24D1Q9UHA3 163 aaKnown RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 HERC1Q15751 4861 aa1.86□□□□□ -2.11
PTCH1-216ENST00000548379 DYNC1H1Q14204 4646 aaKnown RBP1.86□□□□□ -2.11
PTCH1-216ENST00000548379 PKD1P98161 4303 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 KIAA2026Q5HYC2 2103 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 IGLV10-54A0A075B6I4 117 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 TRAV4A0A0B4J268 109 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 A0A0D9SG52 128 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 PLA2G10O15496 165 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 SSSCA1O60232 199 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 PITX3O75364 302 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 OR10J4P0C629 311 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 SFTA3P0C7M3 94 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 TAS2R30P59541 319 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 SLC38A11Q08AI6 406 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 PDE6HQ13956 83 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 ZNF846Q147U1 533 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 ELOBQ15370 118 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 RHOHQ15669 191 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 PYDC2Q56P42 97 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 LELP1Q5T871 98 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 TRIQKQ629K1 86 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 Q6ZSA8 131 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 AKAP14Q86UN6 197 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 TOMM5Q8N4H5 51 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 ZCCHC13Q8WW36 166 aaKnown RBP1.85□□□□□ -2.11
PTCH1-216ENST00000548379 DPH3Q96FX2 82 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 C2orf50Q96LR7 162 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 SLC25A21Q9BQT8 299 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-216ENST00000548379 GGACTQ9BVM4 153 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 UQCC1Q9NVA1 299 aa1.85□□□□□ -2.11
PTCH1-216ENST00000548379 DNAH6Q9C0G6 4158 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 DNAH5Q8TE73 4624 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 TRBV19A0A075B6N1 114 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 A0A087WWC5 75 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 A0A087WX48 190 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 TRBV6-4A0A1B0GX49 114 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 H3BQ15 152 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 M0R2P5 195 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 UBE2L6O14933 153 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 SFT2D2O95562 160 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 IFNA1P01562 189 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 METTL15P1P0C7V9 234 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 IGLC2P0DOY2 106 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 MGST1P10620 155 aaKnown RBP1.84□□□□□ -2.11
PTCH1-216ENST00000548379 DEFA1P59665 94 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 FAM74A1Q5RGS3 127 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 PATE2Q6UY27 113 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-216ENST00000548379 ZC2HC1AQ96GY0 325 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 WDR61Q9GZS3 305 aaKnown RBP1.84□□□□□ -2.11
PTCH1-216ENST00000548379 AGPAT4-IT1Q9H0P7 198 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 SMDT1Q9H4I9 107 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 GSKIPQ9P0R6 139 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 TMEM14CQ9P0S9 112 aa1.84□□□□□ -2.11
PTCH1-216ENST00000548379 DMBT1Q9UGM3 2413 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-216ENST00000548379 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 LRP1BQ9NZR2 4599 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 TRBV20OR9-2A0A075B6H5 130 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 IGKV2-40A0A087WW87 121 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-216ENST00000548379 IGHV3-73A0A0B4J1V6 119 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 TRAV21A0A0B4J279 112 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 A0A1W2PNM2 257 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 GRIFINA4D1Z8 144 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 RBAKDNA6NC62 111 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 C19orf71A6NCJ1 209 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 M0R3E3 92 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms