RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 UPK3BQ9BT76 320 aa14.96□□□□□ -0.01
RBFOX1-210ENST00000547605 DNAH7Q8WXX0 4024 aa14.96□□□□□ -0.01
RBFOX1-210ENST00000547605 A0A1B0GV90 55 aa14.96□□□□□ -0.01
RBFOX1-210ENST00000547605 C11orf86A6NJI1 115 aa14.96□□□□□ -0.01
RBFOX1-210ENST00000547605 HSD52Q0P140 79 aa14.96□□□□□ -0.01
RBFOX1-210ENST00000547605 REG3AQ06141 175 aa14.95□□□□□ -0.02
RBFOX1-210ENST00000547605 BVES-AS1Q5T3Y7 98 aa14.95□□□□□ -0.02
RBFOX1-210ENST00000547605 DNAH10OSP0CZ25 163 aa14.94□□□□□ -0.02
RBFOX1-210ENST00000547605 CHAC1Q9BUX1 264 aa14.94□□□□□ -0.02
RBFOX1-210ENST00000547605 Q9H8V8 135 aa14.94□□□□□ -0.02
RBFOX1-210ENST00000547605 SEC11AP67812 179 aa14.94□□□□□ -0.02
RBFOX1-210ENST00000547605 GEMIN7Q9H840 131 aaKnown RBP14.94□□□□□ -0.02
RBFOX1-210ENST00000547605 LINC00959A0A1B0GUT2 108 aa14.93□□□□□ -0.02
RBFOX1-210ENST00000547605 TP73-AS1Q9UF72 201 aa14.93□□□□□ -0.02
RBFOX1-210ENST00000547605 TINCRA0A1B0GVN0 87 aa14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 CRPP02741 224 aa14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 SS18Q15532 418 aa14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 DYNC2H1Q8NCM8 4307 aaKnown RBP14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 TMEM170BQ5T4T1 132 aa14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 LINC00242Q5T6M2 205 aa14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 UBE2WQ96B02 151 aa14.92□□□□□ -0.02
RBFOX1-210ENST00000547605 STARD9Q9P2P6 4700 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 MYMXA0A1B0GTQ4 84 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 HERVK_113P63121 156 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 PRR34Q9NV39 138 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 IGLV10-54A0A075B6I4 117 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 COX6A2Q02221 97 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 TAL2Q16559 108 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 CASC10Q5T4H9 136 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 ENHOQ6UWT2 76 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 LINC00469Q8N7U9 141 aa14.89□□□□□ -0.03
RBFOX1-210ENST00000547605 FAM19A3Q7Z5A8 133 aa14.88□□□□□ -0.03
RBFOX1-210ENST00000547605 C3orf84H3BNL1 204 aa14.87□□□□□ -0.03
RBFOX1-210ENST00000547605 CCL25O15444 150 aa14.87□□□□□ -0.03
RBFOX1-210ENST00000547605 ZNF22P17026 224 aaPredicted RBP14.87□□□□□ -0.03
RBFOX1-210ENST00000547605 XCL1P47992 114 aa14.87□□□□□ -0.03
RBFOX1-210ENST00000547605 A6NDN8 102 aa14.87□□□□□ -0.03
RBFOX1-210ENST00000547605 ORAOV1Q8WV07 137 aa14.87□□□□□ -0.03
RBFOX1-210ENST00000547605 C10orf126Q8N4M7 172 aa14.85□□□□□ -0.03
RBFOX1-210ENST00000547605 CHCHD10Q8WYQ3 142 aaPredicted RBP14.85□□□□□ -0.03
RBFOX1-210ENST00000547605 CDKN2A-AS1Q9UH64 79 aa14.85□□□□□ -0.03
RBFOX1-210ENST00000547605 TENM2Q9NT68 2774 aa14.85□□□□□ -0.03
RBFOX1-210ENST00000547605 PLECQ15149 4684 aaKnown RBP14.85□□□□□ -0.03
RBFOX1-210ENST00000547605 MAPKAPK5-AS1Q8N8E1 139 aa14.85□□□□□ -0.03
RBFOX1-210ENST00000547605 MIAQ16674 131 aa14.84□□□□□ -0.03
RBFOX1-210ENST00000547605 TMEM223A0PJW6 202 aa14.83□□□□□ -0.04
RBFOX1-210ENST00000547605 H3BRM9 83 aa14.83□□□□□ -0.04
RBFOX1-210ENST00000547605 TTTY13Q9BZ97 58 aa14.83□□□□□ -0.04
RBFOX1-210ENST00000547605 TRAV8-4A0A0B4J246 113 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 ZNF815PA8K554 130 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 PLEKHB2Q96CS7 222 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 IGLV5-45A0A087WSX0 123 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 IBA57-AS1B1ANH7 110 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 LEPROTO15243 131 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 Q9HAA7 133 aa14.82□□□□□ -0.04
RBFOX1-210ENST00000547605 CD164L2Q6UWJ8 174 aa14.81□□□□□ -0.04
RBFOX1-210ENST00000547605 COX11Q9Y6N1 276 aa14.81□□□□□ -0.04
RBFOX1-210ENST00000547605 IGHV3-64A0A075B6Q5 118 aa14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 IGHV3OR16-9A0A0B4J2B5 98 aa14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 SPINK8P0C7L1 97 aa14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 LGALS3P17931 250 aaKnown RBP14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 C5orf38Q86SI9 138 aa14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 TM2D2Q9BX73 214 aa14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 K7EP13 123 aa14.8□□□□□ -0.04
RBFOX1-210ENST00000547605 TRAV8-3A0A0A6YYJ7 113 aa14.79□□□□□ -0.04
RBFOX1-210ENST00000547605 GAGE12HA6NDE8 117 aa14.79□□□□□ -0.04
RBFOX1-210ENST00000547605 J3QQQ9 107 aa14.79□□□□□ -0.04
RBFOX1-210ENST00000547605 LYSTQ99698 3801 aa14.79□□□□□ -0.04
RBFOX1-210ENST00000547605 C1orf43Q9BWL3 253 aa14.79□□□□□ -0.04
RBFOX1-210ENST00000547605 SCGB1D4Q6XE38 83 aa14.78□□□□□ -0.04
RBFOX1-210ENST00000547605 CEND1Q8N111 149 aa14.78□□□□□ -0.04
RBFOX1-210ENST00000547605 IGKV2D-24A0A075B6R9 120 aa14.78□□□□□ -0.04
RBFOX1-210ENST00000547605 HIST1H4GQ99525 98 aa14.77□□□□□ -0.05
RBFOX1-210ENST00000547605 GCSHP23434 173 aa14.76□□□□□ -0.05
RBFOX1-210ENST00000547605 FOXI1Q12951 378 aa14.76□□□□□ -0.05
RBFOX1-210ENST00000547605 A0A087WZ39 114 aa14.76□□□□□ -0.05
RBFOX1-210ENST00000547605 COX7A2LO14548 114 aa14.76□□□□□ -0.05
RBFOX1-210ENST00000547605 TAX1BP3O14907 124 aa14.76□□□□□ -0.05
RBFOX1-210ENST00000547605 LY6G6CO95867 125 aa14.76□□□□□ -0.05
RBFOX1-210ENST00000547605 PTTG1IPP53801 180 aa14.75□□□□□ -0.05
RBFOX1-210ENST00000547605 TTC32Q5I0X7 151 aa14.75□□□□□ -0.05
RBFOX1-210ENST00000547605 KRTAP1-5Q9BYS1 174 aa14.75□□□□□ -0.05
RBFOX1-210ENST00000547605 IGHV1-58A0A0C4DH39 117 aa14.74□□□□□ -0.05
RBFOX1-210ENST00000547605 NBDYA0A0U1RRE5 68 aa14.74□□□□□ -0.05
RBFOX1-210ENST00000547605 SMIM1B2RUZ4 78 aa14.74□□□□□ -0.05
RBFOX1-210ENST00000547605 MALP21145 153 aa14.74□□□□□ -0.05
RBFOX1-210ENST00000547605 RMI2Q96E14 147 aa14.73□□□□□ -0.05
RBFOX1-210ENST00000547605 SMIM13P0DJ93 91 aa14.72□□□□□ -0.05
RBFOX1-210ENST00000547605 SPANXB1Q9NS25 103 aaPredicted RBP14.72□□□□□ -0.05
RBFOX1-210ENST00000547605 TMEM238LA0A1B0GVL6 79 aa14.71□□□□□ -0.06
RBFOX1-210ENST00000547605 A6NJY4 79 aa14.71□□□□□ -0.06
RBFOX1-210ENST00000547605 LINC00476Q8WZB0 136 aa14.71□□□□□ -0.06
RBFOX1-210ENST00000547605 M0R2N4 97 aa14.7□□□□□ -0.06
RBFOX1-210ENST00000547605 TSPEAR-AS2P59090 65 aa14.7□□□□□ -0.06
RBFOX1-210ENST00000547605 SRSF9Q13242 221 aaKnown RBP eCLIP14.7□□□□□ -0.06
RBFOX1-210ENST00000547605 KRTAP26-1Q6PEX3 210 aa14.7□□□□□ -0.06
RBFOX1-210ENST00000547605 TOMM7Q9P0U1 55 aa14.69□□□□□ -0.06
RBFOX1-210ENST00000547605 IGLV5-39A0A0G2JS06 123 aa14.69□□□□□ -0.06
RBFOX1-210ENST00000547605 FXYD2P54710 66 aa14.69□□□□□ -0.06
RBFOX1-210ENST00000547605 LINC01561Q8N1V8 128 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms